| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is ilvG [H]
Identifier: 186477762
GI number: 186477762
Start: 3383745
End: 3385445
Strand: Direct
Name: ilvG [H]
Synonym: Bphy_3016
Alternate gene names: 186477762
Gene position: 3383745-3385445 (Clockwise)
Preceding gene: 186477761
Following gene: 186477765
Centisome position: 97.26
GC content: 63.73
Gene sequence:
>1701_bases ATGTCGCTGTCTTCCGATGCTTCAAATATGACCACGGGCGCACGGCTCATGGTCGACGCGCTGCTGACGCATGGCGTCGA GCGCGTGTTTTGCGTGCCTGGCGAAAGTTTTCTGGCGATCCTCGATTCGTTGCACGACGAGACGTCGCAGATTCAGACAG TTGTGTGCCGCCACGAAGCGGCCGCCGCCAACATGGCGGAAGCCGTCGGCAAGCTGACGGGCCGGCCGGGCATCGCGATC GTCACGCGCGGACCGGGCGCGACGCACGCATCGATCGGCGTGCACACGGCGTTTCAGGACTCGACGCCGATGATCCTGCT GATCGGCCAATGTGCGCGCGAGCATCTGGACCGCGAGGCGTTTCAGGAAATCGACTACCGGCGCATGTTCGGCCAGATGG CGAAGTGGGTCGCGCAGATTGACGACGCGCGCCGCATTCCCGAGTACATGAGCCACGCGTTCCACGTCGCGACGTCGGGT CGCCCTGGCCCTGTCGTACTGTCGTTGCCTGAAGACATGTTGAGCGACGCGTGTGCCGCGATGCCGGGTGCGCCCGCTTA TCAGCGCGTGGCGGCCGCGCCGGCGCCGCAGCAGATCGAGCGTCTGCGCGGCCTGCTCGAAGGCGCGAAGAAACCGATGG TGATCGCGGGCGGCAGCGGCTGGACGCCGCAAGCGTGCGAAGACCTCCGCACCTTCATCGAGAACTGGCAGCTACCCATC GGCCTCGCGTTCCGCTTCCAGGACACGCTCGACAACGAGCATCCGAACTATGCGGGCGATGTGGGTCTCGGCATCAATCC CGCGCTTGCCAAACGCATCCAGGACGCCGACGTGCTGCTCGCGCTCGGCCCGCGCCTGGGCGAAGCGACGACGAATGGCT ACACGCTGCTCGACATTCCGAAGACGAAGCAGACATTGATCCACGTGCATCAAGGCGCGGACGAGCTGGGCCGCGTGTAT GCCGCCGATCTGCCCATCGTGTCGGGCATGCCGGAAATCGCATCGATGCTGGCGGCGCTGAAACGGGTGGCACAACCCGC CTGGTCAGGCAGCGCGAAGGAAGCGCACGACGCGTACCTCGAATGGCGCAAGCCGCGCATGGTTCCGGGCGATGTGCAAC TCGGCGAGATCATGCTGCAGCTTCGCGAACATCTGCCGAAGGACGCGATTCTCACGAACGGCGCGGGCAATTACGCGACA TGGCTGCATCGTCATTTTGCGTATCGCCATTTCCGTTCCCAGTTGGCACCGACTAGCGGCGCGATGGGTTATGGCGTGCC GGCGGCGATTGCGGCCAAGTCGATGTATCCGGACCGGACGGTGGTCGCGTTCGCAGGCGATGGCTGTTTCATGATGTCGT CATCGGAGATCGCGACGGCGGTGCAATACGACTTGCCGGTGATATTCATCGTCGTGAACAACAGCCAGTACGGCACGATC CGGATGCACCAGGAGCGCCATTATCCGAATCGCGTGCATGGAACGGGGCTGACCAATCCAGACTTCGCGGCGTTTGCAAG ATCATTCGGCGCCCACGGCGAAACGGTGGAACGCACAGAAGACTTCATGCCCGCATTCAAGCGCGCGCAAGAGTCGAAGA AACCGGCGGTAATCGAAGTCCGGATGATCCAGGAAGCGAGCACACCGGGCGCGACACTGGAGCAGGTGCGCGAGCAGGGC AGGAAACTGCGCGGCGAATAA
Upstream 100 bases:
>100_bases TCGCGGTAAACATCATCGAATGTTGACGCTTTTGCGAATGACATTGAAGAGGGTCTCGGCGTAAGCTGTCGAAGCTCTTC TGACTGGAGGTGTGTTCGCA
Downstream 100 bases:
>100_bases GCAGGAGCCACGGGCGCCTTTTGGGGCCCGTGGGCACGAGTCAAGAATTGGCGGTGTGAGCTGCTTTCTTTTGCCTACTT TTCTTTGCAGTCGGCAAAGA
Product: thiamine pyrophosphate protein
Products: NA
Alternate protein names: AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit [H]
Number of amino acids: Translated: 566; Mature: 565
Protein sequence:
>566_residues MSLSSDASNMTTGARLMVDALLTHGVERVFCVPGESFLAILDSLHDETSQIQTVVCRHEAAAANMAEAVGKLTGRPGIAI VTRGPGATHASIGVHTAFQDSTPMILLIGQCAREHLDREAFQEIDYRRMFGQMAKWVAQIDDARRIPEYMSHAFHVATSG RPGPVVLSLPEDMLSDACAAMPGAPAYQRVAAAPAPQQIERLRGLLEGAKKPMVIAGGSGWTPQACEDLRTFIENWQLPI GLAFRFQDTLDNEHPNYAGDVGLGINPALAKRIQDADVLLALGPRLGEATTNGYTLLDIPKTKQTLIHVHQGADELGRVY AADLPIVSGMPEIASMLAALKRVAQPAWSGSAKEAHDAYLEWRKPRMVPGDVQLGEIMLQLREHLPKDAILTNGAGNYAT WLHRHFAYRHFRSQLAPTSGAMGYGVPAAIAAKSMYPDRTVVAFAGDGCFMMSSSEIATAVQYDLPVIFIVVNNSQYGTI RMHQERHYPNRVHGTGLTNPDFAAFARSFGAHGETVERTEDFMPAFKRAQESKKPAVIEVRMIQEASTPGATLEQVREQG RKLRGE
Sequences:
>Translated_566_residues MSLSSDASNMTTGARLMVDALLTHGVERVFCVPGESFLAILDSLHDETSQIQTVVCRHEAAAANMAEAVGKLTGRPGIAI VTRGPGATHASIGVHTAFQDSTPMILLIGQCAREHLDREAFQEIDYRRMFGQMAKWVAQIDDARRIPEYMSHAFHVATSG RPGPVVLSLPEDMLSDACAAMPGAPAYQRVAAAPAPQQIERLRGLLEGAKKPMVIAGGSGWTPQACEDLRTFIENWQLPI GLAFRFQDTLDNEHPNYAGDVGLGINPALAKRIQDADVLLALGPRLGEATTNGYTLLDIPKTKQTLIHVHQGADELGRVY AADLPIVSGMPEIASMLAALKRVAQPAWSGSAKEAHDAYLEWRKPRMVPGDVQLGEIMLQLREHLPKDAILTNGAGNYAT WLHRHFAYRHFRSQLAPTSGAMGYGVPAAIAAKSMYPDRTVVAFAGDGCFMMSSSEIATAVQYDLPVIFIVVNNSQYGTI RMHQERHYPNRVHGTGLTNPDFAAFARSFGAHGETVERTEDFMPAFKRAQESKKPAVIEVRMIQEASTPGATLEQVREQG RKLRGE >Mature_565_residues SLSSDASNMTTGARLMVDALLTHGVERVFCVPGESFLAILDSLHDETSQIQTVVCRHEAAAANMAEAVGKLTGRPGIAIV TRGPGATHASIGVHTAFQDSTPMILLIGQCAREHLDREAFQEIDYRRMFGQMAKWVAQIDDARRIPEYMSHAFHVATSGR PGPVVLSLPEDMLSDACAAMPGAPAYQRVAAAPAPQQIERLRGLLEGAKKPMVIAGGSGWTPQACEDLRTFIENWQLPIG LAFRFQDTLDNEHPNYAGDVGLGINPALAKRIQDADVLLALGPRLGEATTNGYTLLDIPKTKQTLIHVHQGADELGRVYA ADLPIVSGMPEIASMLAALKRVAQPAWSGSAKEAHDAYLEWRKPRMVPGDVQLGEIMLQLREHLPKDAILTNGAGNYATW LHRHFAYRHFRSQLAPTSGAMGYGVPAAIAAKSMYPDRTVVAFAGDGCFMMSSSEIATAVQYDLPVIFIVVNNSQYGTIR MHQERHYPNRVHGTGLTNPDFAAFARSFGAHGETVERTEDFMPAFKRAQESKKPAVIEVRMIQEASTPGATLEQVREQGR KLRGE
Specific function: Catalyzes the first step in the biosynthesis of branched-chain amino acids [H]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=584, Percent_Identity=22.9452054794521, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI21361361, Length=564, Percent_Identity=25.531914893617, Blast_Score=129, Evalue=8e-30, Organism=Escherichia coli, GI87081685, Length=540, Percent_Identity=29.6296296296296, Blast_Score=230, Evalue=2e-61, Organism=Escherichia coli, GI1790104, Length=545, Percent_Identity=29.3577981651376, Blast_Score=189, Evalue=6e-49, Organism=Escherichia coli, GI1786717, Length=577, Percent_Identity=26.1698440207972, Blast_Score=166, Evalue=3e-42, Organism=Escherichia coli, GI1788716, Length=570, Percent_Identity=26.6666666666667, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1787096, Length=561, Percent_Identity=25.8467023172906, Blast_Score=124, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17542570, Length=564, Percent_Identity=25.177304964539, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17531301, Length=516, Percent_Identity=26.5503875968992, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI17531299, Length=516, Percent_Identity=26.5503875968992, Blast_Score=125, Evalue=5e-29, Organism=Saccharomyces cerevisiae, GI6323755, Length=571, Percent_Identity=26.6199649737303, Blast_Score=213, Evalue=6e-56, Organism=Saccharomyces cerevisiae, GI6320816, Length=563, Percent_Identity=22.9129662522202, Blast_Score=103, Evalue=7e-23, Organism=Saccharomyces cerevisiae, GI6323163, Length=560, Percent_Identity=22.1428571428571, Blast_Score=82, Evalue=2e-16, Organism=Drosophila melanogaster, GI19922626, Length=558, Percent_Identity=27.2401433691756, Blast_Score=146, Evalue=4e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 61649; Mature: 61518
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSSDASNMTTGARLMVDALLTHGVERVFCVPGESFLAILDSLHDETSQIQTVVCRHEA CCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHH AAANMAEAVGKLTGRPGIAIVTRGPGATHASIGVHTAFQDSTPMILLIGQCAREHLDREA HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEECHHHHHHHHHHH FQEIDYRRMFGQMAKWVAQIDDARRIPEYMSHAFHVATSGRPGPVVLSLPEDMLSDACAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEECCHHHHHHHHHH MPGAPAYQRVAAAPAPQQIERLRGLLEGAKKPMVIAGGSGWTPQACEDLRTFIENWQLPI CCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCE GLAFRFQDTLDNEHPNYAGDVGLGINPALAKRIQDADVLLALGPRLGEATTNGYTLLDIP EEEEEEHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECC KTKQTLIHVHQGADELGRVYAADLPIVSGMPEIASMLAALKRVAQPAWSGSAKEAHDAYL CCHHHHHHHHCCHHHHHHEEECCCCHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH EWRKPRMVPGDVQLGEIMLQLREHLPKDAILTNGAGNYATWLHRHFAYRHFRSQLAPTSG HHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCC AMGYGVPAAIAAKSMYPDRTVVAFAGDGCFMMSSSEIATAVQYDLPVIFIVVNNSQYGTI CCCCCCHHHHHHHHCCCCCEEEEEECCCEEEECCCHHHHHEEECCCEEEEEEECCCCCEE RMHQERHYPNRVHGTGLTNPDFAAFARSFGAHGETVERTEDFMPAFKRAQESKKPAVIEV EEEHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE RMIQEASTPGATLEQVREQGRKLRGE EEECCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure SLSSDASNMTTGARLMVDALLTHGVERVFCVPGESFLAILDSLHDETSQIQTVVCRHEA CCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHH AAANMAEAVGKLTGRPGIAIVTRGPGATHASIGVHTAFQDSTPMILLIGQCAREHLDREA HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEECHHHHHHHHHHH FQEIDYRRMFGQMAKWVAQIDDARRIPEYMSHAFHVATSGRPGPVVLSLPEDMLSDACAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEECCHHHHHHHHHH MPGAPAYQRVAAAPAPQQIERLRGLLEGAKKPMVIAGGSGWTPQACEDLRTFIENWQLPI CCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCE GLAFRFQDTLDNEHPNYAGDVGLGINPALAKRIQDADVLLALGPRLGEATTNGYTLLDIP EEEEEEHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECC KTKQTLIHVHQGADELGRVYAADLPIVSGMPEIASMLAALKRVAQPAWSGSAKEAHDAYL CCHHHHHHHHCCHHHHHHEEECCCCHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH EWRKPRMVPGDVQLGEIMLQLREHLPKDAILTNGAGNYATWLHRHFAYRHFRSQLAPTSG HHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCC AMGYGVPAAIAAKSMYPDRTVVAFAGDGCFMMSSSEIATAVQYDLPVIFIVVNNSQYGTI CCCCCCHHHHHHHHCCCCCEEEEEECCCEEEECCCHHHHHEEECCCEEEEEEECCCCCEE RMHQERHYPNRVHGTGLTNPDFAAFARSFGAHGETVERTEDFMPAFKRAQESKKPAVIEV EEEHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE RMIQEASTPGATLEQVREQGRKLRGE EEECCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3550695; 1379743; 9278503; 1995430; 6154938; 7015336; 3897211 [H]