| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477760
Identifier: 186477760
GI number: 186477760
Start: 3381061
End: 3382197
Strand: Direct
Name: 186477760
Synonym: Bphy_3014
Alternate gene names: NA
Gene position: 3381061-3382197 (Clockwise)
Preceding gene: 186477759
Following gene: 186477761
Centisome position: 97.18
GC content: 65.17
Gene sequence:
>1137_bases ATGAAGCGAAACGGTCGGGCGCGGGTGCGCCGTAGCACGCGGGCACCATCGACGCGTCCGTTTCTTCCGCTGATCGCCGC TGCGTGGTTCGCCATGGGAACACTGGCGCTGTCGCCCGGTTTCGCCCATGCCGCGATGAACCTCTGCGCTGCACCCGCGC TGCAAACCAGCGAGCGCACCAACGCCGATCCTGGCGTGAAGGCACTGGTGAGGAATGTGCAGGCGCATCTGAGCGAGCCG GCGCATGCGGTGCGTCAGTTGCACACGGAAGGCACGCTGCCGCACGAAGGCATCTATGACGAGAGCAAGGAAGCCGAGAA AGATCTCGACCTGTTGCGCGACGCCGCGCTCGCGTGGCGCGCCACCAGCGACGACCGCTATCTGAAGCTCGTCGACCGCC TGCTGTACGCGTGGGTCACAACCTACGAGCCGTCGTTCAATCCCATCGACGAAACGCCGTTCGAAGGCTTGATCCTCGCC TACGACATGACGGCGAGCGCGCTACCCGTGAAGACCCGCAACGCGACGATGGCGTTTCTGACGAAACTCGCGAACGGCTA CATCGCGCAAATCGACACGCAAAAGCGGCCGCTCACGGGCACGTATCGCAACAACTGGCAAAGCCATCGCGTGAAGCTGA TCGCAATGGCTGCCTTCACGCTCGACAACCGCAAACTGATCGACGCGGCGCAGCGCCTGTACGTCGAGCACATCAACGAC AACGTCGCACCCGACGGCACGACTGTCGACTTCAGCGAACGCGACGCGCTGCACTATGTCACCTACGATCTCCAGCCGCT CGTGACGGCAGCGCTGGCCGCGCGCCGCCACAACCGCAACTGGCTCAACGAGCGCGCGCCGGGCGGAGCGACGCTCGCCG CCGCGCTCAACTGGCTGACGCCGTATGCGACGGGCGCGAAAACCCACGACGAATTCGTGCATTCGAACGTGCCGTTCGAC GCAAAACGTCGCGAAGCCGGTTTGCCCGGCTATAGTGGACAGTGGGATCCGAAAAATGCGGCCGAGCTGTATCACCTCGC CGCGCGGCTCGACGGACGCTACACGCCCGTCGCGCTGAAACTGGCACCGACGCCGCCCGCGTGGCTCGCCGTGTGCCTGC CCTTGCCGGCGCGTTGA
Upstream 100 bases:
>100_bases GCGCGGGCCGTGCCCGCCGCGTGTTTCGCCGCCCGTCGGGCTGTCGCTTTGCACGTCGGACGGCTAACATCTCACCTTGA TCGAACCAGAGGAGCCATGC
Downstream 100 bases:
>100_bases TCACGCGCGGGGCAATGGCTCAATGAGCTGCCGCGTTACCCACGCGGTGCAGCATCCACGACATTCAAGCTAGCAGGAGC AGTGATGGCAGTCAGCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MKRNGRARVRRSTRAPSTRPFLPLIAAAWFAMGTLALSPGFAHAAMNLCAAPALQTSERTNADPGVKALVRNVQAHLSEP AHAVRQLHTEGTLPHEGIYDESKEAEKDLDLLRDAALAWRATSDDRYLKLVDRLLYAWVTTYEPSFNPIDETPFEGLILA YDMTASALPVKTRNATMAFLTKLANGYIAQIDTQKRPLTGTYRNNWQSHRVKLIAMAAFTLDNRKLIDAAQRLYVEHIND NVAPDGTTVDFSERDALHYVTYDLQPLVTAALAARRHNRNWLNERAPGGATLAAALNWLTPYATGAKTHDEFVHSNVPFD AKRREAGLPGYSGQWDPKNAAELYHLAARLDGRYTPVALKLAPTPPAWLAVCLPLPAR
Sequences:
>Translated_378_residues MKRNGRARVRRSTRAPSTRPFLPLIAAAWFAMGTLALSPGFAHAAMNLCAAPALQTSERTNADPGVKALVRNVQAHLSEP AHAVRQLHTEGTLPHEGIYDESKEAEKDLDLLRDAALAWRATSDDRYLKLVDRLLYAWVTTYEPSFNPIDETPFEGLILA YDMTASALPVKTRNATMAFLTKLANGYIAQIDTQKRPLTGTYRNNWQSHRVKLIAMAAFTLDNRKLIDAAQRLYVEHIND NVAPDGTTVDFSERDALHYVTYDLQPLVTAALAARRHNRNWLNERAPGGATLAAALNWLTPYATGAKTHDEFVHSNVPFD AKRREAGLPGYSGQWDPKNAAELYHLAARLDGRYTPVALKLAPTPPAWLAVCLPLPAR >Mature_378_residues MKRNGRARVRRSTRAPSTRPFLPLIAAAWFAMGTLALSPGFAHAAMNLCAAPALQTSERTNADPGVKALVRNVQAHLSEP AHAVRQLHTEGTLPHEGIYDESKEAEKDLDLLRDAALAWRATSDDRYLKLVDRLLYAWVTTYEPSFNPIDETPFEGLILA YDMTASALPVKTRNATMAFLTKLANGYIAQIDTQKRPLTGTYRNNWQSHRVKLIAMAAFTLDNRKLIDAAQRLYVEHIND NVAPDGTTVDFSERDALHYVTYDLQPLVTAALAARRHNRNWLNERAPGGATLAAALNWLTPYATGAKTHDEFVHSNVPFD AKRREAGLPGYSGQWDPKNAAELYHLAARLDGRYTPVALKLAPTPPAWLAVCLPLPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41907; Mature: 41907
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRNGRARVRRSTRAPSTRPFLPLIAAAWFAMGTLALSPGFAHAAMNLCAAPALQTSERT CCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC NADPGVKALVRNVQAHLSEPAHAVRQLHTEGTLPHEGIYDESKEAEKDLDLLRDAALAWR CCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEE ATSDDRYLKLVDRLLYAWVTTYEPSFNPIDETPFEGLILAYDMTASALPVKTRNATMAFL CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHH TKLANGYIAQIDTQKRPLTGTYRNNWQSHRVKLIAMAAFTLDNRKLIDAAQRLYVEHIND HHHHCCEEEEECCCCCCCCCHHHCCCHHHHEEEEEEEEHCCCCHHHHHHHHHHHHHHHCC NVAPDGTTVDFSERDALHYVTYDLQPLVTAALAARRHNRNWLNERAPGGATLAAALNWLT CCCCCCCEECCCCCCCEEEEEECHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHC PYATGAKTHDEFVHSNVPFDAKRREAGLPGYSGQWDPKNAAELYHLAARLDGRYTPVALK CCCCCCCCHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEE LAPTPPAWLAVCLPLPAR ECCCCHHHHEEEECCCCC >Mature Secondary Structure MKRNGRARVRRSTRAPSTRPFLPLIAAAWFAMGTLALSPGFAHAAMNLCAAPALQTSERT CCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC NADPGVKALVRNVQAHLSEPAHAVRQLHTEGTLPHEGIYDESKEAEKDLDLLRDAALAWR CCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEE ATSDDRYLKLVDRLLYAWVTTYEPSFNPIDETPFEGLILAYDMTASALPVKTRNATMAFL CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHH TKLANGYIAQIDTQKRPLTGTYRNNWQSHRVKLIAMAAFTLDNRKLIDAAQRLYVEHIND HHHHCCEEEEECCCCCCCCCHHHCCCHHHHEEEEEEEEHCCCCHHHHHHHHHHHHHHHCC NVAPDGTTVDFSERDALHYVTYDLQPLVTAALAARRHNRNWLNERAPGGATLAAALNWLT CCCCCCCEECCCCCCCEEEEEECHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHC PYATGAKTHDEFVHSNVPFDAKRREAGLPGYSGQWDPKNAAELYHLAARLDGRYTPVALK CCCCCCCCHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEE LAPTPPAWLAVCLPLPAR ECCCCHHHHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA