Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186477748

Identifier: 186477748

GI number: 186477748

Start: 3366543

End: 3366902

Strand: Direct

Name: 186477748

Synonym: Bphy_3002

Alternate gene names: NA

Gene position: 3366543-3366902 (Clockwise)

Preceding gene: 186477747

Following gene: 186477749

Centisome position: 96.76

GC content: 64.44

Gene sequence:

>360_bases
ATGCAATTTATCGTTCGCGCGCTTGGCTGTGGTGCGCTGATTTCATCGCTTGCCGCGTGCGTGATCTCACCGTCGAAGCA
GATCGCCGAATCGCACCCCTCGGCGAATCCGCACGAAATGGCCGTGCATCGACTCGAACAGGTCGACGGCCGTATCGACG
ACATGGGTCGTCACATCGACGCCCGTGTGAACCAGGGCCACTATCCGCCGCCCGAGGGCGCCGCGCTGCATCGCCGGCTC
GACACGATCCGCCAGGAATCGCACGACATGTCCGCGCAGCACGGCGGCGGCCTCACGGGCGACGAACAACGCGTGCTGAA
TCAGGAACTCGATACGGCGTCGGCGGCCATCAACCGCTGA

Upstream 100 bases:

>100_bases
CCTCGTCCTGTTCCAGGCTGGATCTTGCTCCCGCCTCTGTTGCGCCCTCGGTCGCTTCCGCAGGGCGCGAACCTTTTGTC
CCGCTGATGGAGAATCATTT

Downstream 100 bases:

>100_bases
TCGCAATCGCGTGCGCCTGCTGCCGCACGGCGCGTACGCCGCCTGCCGCGCGCGTCGCCTGCGGCATTTTTTTTGAAATC
AGCACCGCTTTTTGCGGCTG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MQFIVRALGCGALISSLAACVISPSKQIAESHPSANPHEMAVHRLEQVDGRIDDMGRHIDARVNQGHYPPPEGAALHRRL
DTIRQESHDMSAQHGGGLTGDEQRVLNQELDTASAAINR

Sequences:

>Translated_119_residues
MQFIVRALGCGALISSLAACVISPSKQIAESHPSANPHEMAVHRLEQVDGRIDDMGRHIDARVNQGHYPPPEGAALHRRL
DTIRQESHDMSAQHGGGLTGDEQRVLNQELDTASAAINR
>Mature_119_residues
MQFIVRALGCGALISSLAACVISPSKQIAESHPSANPHEMAVHRLEQVDGRIDDMGRHIDARVNQGHYPPPEGAALHRRL
DTIRQESHDMSAQHGGGLTGDEQRVLNQELDTASAAINR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12907; Mature: 12907

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFIVRALGCGALISSLAACVISPSKQIAESHPSANPHEMAVHRLEQVDGRIDDMGRHID
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
ARVNQGHYPPPEGAALHRRLDTIRQESHDMSAQHGGGLTGDEQRVLNQELDTASAAINR
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQFIVRALGCGALISSLAACVISPSKQIAESHPSANPHEMAVHRLEQVDGRIDDMGRHID
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
ARVNQGHYPPPEGAALHRRLDTIRQESHDMSAQHGGGLTGDEQRVLNQELDTASAAINR
HHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA