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The map label for this gene is 186477745

Identifier: 186477745

GI number: 186477745

Start: 3361920

End: 3362879

Strand: Direct

Name: 186477745

Synonym: Bphy_2999

Alternate gene names: NA

Gene position: 3361920-3362879 (Clockwise)

Preceding gene: 186477737

Following gene: 186477747

Centisome position: 96.63

GC content: 67.6

Gene sequence:

>960_bases
ATGAGCGAAGCACCACACGGAGCCCCGATCAAGACCCCCGGACAGCTGATTGCCGCAGTCATCGCCGGCTTTGCTGTCCC
TATCATCATCATCGTTCTGCTGGCCTATTACGTCGACAACTCGACCCGCACGGGCGCGGGCACCGACGGTCTGTCCGACG
CCGCTACCGACGCACGCACCGCCCCCCTCGCCAAAGTCGATATCCGCGACGCCAACGCGCCACGCGTCTACAAGACAGGC
GAGGAAGTCTACAAGGCAGTGTGCTCGGCCTGTCACGCGTCCGGTGCGGCGGGCGCGCCGAAGTTCACCAACACGGGCGA
CTGGGCGCCGCGTATCGCCCAAGGTTTCGATACGTTGTGGCACAACGCGCTGACGGGCAAGGGCGCGATGCCCGCGCGCG
GCGGCACGAGCCCGGACGACTACAGCGACTACGAGATCGGTCTCGCCGTCGCCTACATGGCGAACAACGCGGGTGCGAAG
TTCGAAGATCCGCCGAAGCCGGTGCCGGGTCAGCCCGCCGCGGCTCCGGCAGGCGCGTCGGGTGCCGCGGCTGCATCCGG
CGCGCAGGCGGCTTCTGGTGCAACGCCCGCTTCGGGCATGGAGGGCGCATCGGGCGCTTCCGGTGGCGCGGGCGCACAAG
CCGCCGCCGCAATGGCCGCGATGGCCAATGTGCCGCAAAGCGCAGCGCCCGCGTCAGGTGGCGCGCAGAGCGCGGATGCA
TCGCAGGCTGGCAAGGCGCTGTATCAGCAGGTTTGTCAGGCCTGTCACGCAGCGGGCGTGCTGAACGCGCCGAAGTTCGG
CGACAAGGAAGCGTGGGCGCCGCGTCTGAAGGATCCCATCGACACCGTCTACAACTACGCACTGCACGGCAAGGGCGCGA
TGCCGCCAAAGGGGGGATCGAACGCCTCCGATGCCGACGTAAAGGCCGCCGTCGACTACATGGTCAATGCAGCGAAATAA

Upstream 100 bases:

>100_bases
CGCCGAAACCTTCCGTCTATAATCGGTCGTGGCTGATCTAGAACAAGGTTGTTGCCGTCGCGCTGTACCGCTCACAATAC
CCACGGGAGACGAGACAAGC

Downstream 100 bases:

>100_bases
GCAGCGACGATAGTTCCGGCACACAACAATCCCCGCCCTGTGCGGGGATTTTTTCTTATGCCTTCTGCAACAGCGCCTTG
AGACTCGCGAGCCGGTCCTT

Product: cytochrome c class I

Products: NA

Alternate protein names: Cytochrome c555 [H]

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSEAPHGAPIKTPGQLIAAVIAGFAVPIIIIVLLAYYVDNSTRTGAGTDGLSDAATDARTAPLAKVDIRDANAPRVYKTG
EEVYKAVCSACHASGAAGAPKFTNTGDWAPRIAQGFDTLWHNALTGKGAMPARGGTSPDDYSDYEIGLAVAYMANNAGAK
FEDPPKPVPGQPAAAPAGASGAAAASGAQAASGATPASGMEGASGASGGAGAQAAAAMAAMANVPQSAAPASGGAQSADA
SQAGKALYQQVCQACHAAGVLNAPKFGDKEAWAPRLKDPIDTVYNYALHGKGAMPPKGGSNASDADVKAAVDYMVNAAK

Sequences:

>Translated_319_residues
MSEAPHGAPIKTPGQLIAAVIAGFAVPIIIIVLLAYYVDNSTRTGAGTDGLSDAATDARTAPLAKVDIRDANAPRVYKTG
EEVYKAVCSACHASGAAGAPKFTNTGDWAPRIAQGFDTLWHNALTGKGAMPARGGTSPDDYSDYEIGLAVAYMANNAGAK
FEDPPKPVPGQPAAAPAGASGAAAASGAQAASGATPASGMEGASGASGGAGAQAAAAMAAMANVPQSAAPASGGAQSADA
SQAGKALYQQVCQACHAAGVLNAPKFGDKEAWAPRLKDPIDTVYNYALHGKGAMPPKGGSNASDADVKAAVDYMVNAAK
>Mature_318_residues
SEAPHGAPIKTPGQLIAAVIAGFAVPIIIIVLLAYYVDNSTRTGAGTDGLSDAATDARTAPLAKVDIRDANAPRVYKTGE
EVYKAVCSACHASGAAGAPKFTNTGDWAPRIAQGFDTLWHNALTGKGAMPARGGTSPDDYSDYEIGLAVAYMANNAGAKF
EDPPKPVPGQPAAAPAGASGAAAASGAQAASGATPASGMEGASGASGGAGAQAAAAMAAMANVPQSAAPASGGAQSADAS
QAGKALYQQVCQACHAAGVLNAPKFGDKEAWAPRLKDPIDTVYNYALHGKGAMPPKGGSNASDADVKAAVDYMVNAAK

Specific function: This basic c-type monoheme cytochrome has been found exclusively in the green photosynthetic bacteria, although its role in bacterial photosynthesis is not established. It has an unusually low redox potential compared with mitochondrial cytochrome c. It i

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002323 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 31498; Mature: 31367

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS00099 THIOLASE_3 ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAPHGAPIKTPGQLIAAVIAGFAVPIIIIVLLAYYVDNSTRTGAGTDGLSDAATDART
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
APLAKVDIRDANAPRVYKTGEEVYKAVCSACHASGAAGAPKFTNTGDWAPRIAQGFDTLW
CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
HNALTGKGAMPARGGTSPDDYSDYEIGLAVAYMANNAGAKFEDPPKPVPGQPAAAPAGAS
HHHHCCCCCCCCCCCCCCCCCCCHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
GAAAASGAQAASGATPASGMEGASGASGGAGAQAAAAMAAMANVPQSAAPASGGAQSADA
CCHHHCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
SQAGKALYQQVCQACHAAGVLNAPKFGDKEAWAPRLKDPIDTVYNYALHGKGAMPPKGGS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCHHHHHHHHHHCCCCCCCCCCCC
NASDADVKAAVDYMVNAAK
CCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SEAPHGAPIKTPGQLIAAVIAGFAVPIIIIVLLAYYVDNSTRTGAGTDGLSDAATDART
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
APLAKVDIRDANAPRVYKTGEEVYKAVCSACHASGAAGAPKFTNTGDWAPRIAQGFDTLW
CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
HNALTGKGAMPARGGTSPDDYSDYEIGLAVAYMANNAGAKFEDPPKPVPGQPAAAPAGAS
HHHHCCCCCCCCCCCCCCCCCCCHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
GAAAASGAQAASGATPASGMEGASGASGGAGAQAAAAMAAMANVPQSAAPASGGAQSADA
CCHHHCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
SQAGKALYQQVCQACHAAGVLNAPKFGDKEAWAPRLKDPIDTVYNYALHGKGAMPPKGGS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHCCHHHHHHHHHHCCCCCCCCCCCC
NASDADVKAAVDYMVNAAK
CCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]