| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is flgI [H]
Identifier: 186477701
GI number: 186477701
Start: 3307521
End: 3308708
Strand: Direct
Name: flgI [H]
Synonym: Bphy_2955
Alternate gene names: 186477701
Gene position: 3307521-3308708 (Clockwise)
Preceding gene: 186477700
Following gene: 186477702
Centisome position: 95.07
GC content: 65.49
Gene sequence:
>1188_bases ATGCGAACCTTCTCTTTCTCCCGTCTGAAGCCCGTCATCGGAATCGCCGCGCGTGCGTTCGCAATGGTGGCGCTCGCGTG CGCCGCGCTGCCCGTCACGACGCATGTCGCCCACGCAGAACGCCTGAAGGATCTCGTGCAGATCCAGGGCGTGCGCGACA ACCCGCTGATCGGCTATGGCCTGGTCGTCGGTCTCGACGGCACGGGCGACCAGACCACGCAGACGCCGTTCACGACGCAG ACGCTCGCGAACATGCTCGCGAACCTCGGCATATCGATCAACAACCAGCAGGCGGGCTCGAATTCCAGCAACAGTTCGCT CTCGAGCATGCAGCTGAAGAACGTCGCCGCCGTGATGGTGACGGCATCGCTGCCCGCGTTCGCGCGTCCCGGCGAAGCCC TCGACGTGACGGTCTCGTCGCTCGGCAACGCGAAGAGCCTGCGCGGCGGCACGTTGCTGCTCACGCCGCTCAAGGGCGCC GACGGCCAGGTGTACGCGCTGGCGCAGGGCAACATGGCCGTCGGCGGCGCAGGTGCGAGCGCGAACGGCAGCAAGGTGCA GGTGAACCAGCTTGCGGCTGGCCGCATTACGGGCGGCGCGATCGTCGAACGCTCGGTGCCGACGACGATTTCGCAGGCAG GCACGATGCAGCTCGAACTGAACGACATGGACTACGACACGACGCAGCGCGTGACGTCCGCGATCAACAACGCGTTCGGC TTCGGCACGGCAGTTGCGCTCGACGGCCGCACGATCCAGTTGCGCGCGCCGAGCGATCCGGCGCAGCAGGTGCAGTTCAT GGCGCAGTTGCAGAATCTCGACGTGAAGCCTGGTCAGGCGGCCGCCAAGGTGATCCTGAACGCGCGCACGGGCTCGATCG TGATGAATCAGATGGTCACGCTGCAGAATTGCGCGGTTGCGCACGGCAATCTTTCCGTGATCGTCAACACGCAGCCGGTG GTGAGTCAGCCGGGTGCGTTCTCGAATGGCCAGACGGTGGTTGCGCAACAGTCGCAGATCGCGCTGAAGCAGGACAACGG CGCGCTCAAGCTGGTGAGTGCGGGCGCGAATCTCGCAGAAGTCGTGAAGGCGCTCAACGCGCTCGGCGCGACGCCTGCGG ATCTGATGTCGATCCTCCAGGCCATGAAGGCAGCGGGTGCGCTGCGAGCCGAACTCGAGATCATCTAA
Upstream 100 bases:
>100_bases CGGACGCGAAGATCGAGTATTCAGCCAAGGGTTACATCGACGAGTCGCAGAACATGAGCTGGCTGCAACGCTTCTTCCTC AACGTCGCGCCGTTCTGACC
Downstream 100 bases:
>100_bases GGAACAGCAAGAATGAACTCCGATACGACGCGCAACGCCGCGAATGACCTGACCAACCGTTTCGCGCTCGACACACAGGG CTTCGATGCGATGCGCGCGC
Product: flagellar basal body P-ring protein
Products: NA
Alternate protein names: Basal body P-ring protein [H]
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MRTFSFSRLKPVIGIAARAFAMVALACAALPVTTHVAHAERLKDLVQIQGVRDNPLIGYGLVVGLDGTGDQTTQTPFTTQ TLANMLANLGISINNQQAGSNSSNSSLSSMQLKNVAAVMVTASLPAFARPGEALDVTVSSLGNAKSLRGGTLLLTPLKGA DGQVYALAQGNMAVGGAGASANGSKVQVNQLAAGRITGGAIVERSVPTTISQAGTMQLELNDMDYDTTQRVTSAINNAFG FGTAVALDGRTIQLRAPSDPAQQVQFMAQLQNLDVKPGQAAAKVILNARTGSIVMNQMVTLQNCAVAHGNLSVIVNTQPV VSQPGAFSNGQTVVAQQSQIALKQDNGALKLVSAGANLAEVVKALNALGATPADLMSILQAMKAAGALRAELEII
Sequences:
>Translated_395_residues MRTFSFSRLKPVIGIAARAFAMVALACAALPVTTHVAHAERLKDLVQIQGVRDNPLIGYGLVVGLDGTGDQTTQTPFTTQ TLANMLANLGISINNQQAGSNSSNSSLSSMQLKNVAAVMVTASLPAFARPGEALDVTVSSLGNAKSLRGGTLLLTPLKGA DGQVYALAQGNMAVGGAGASANGSKVQVNQLAAGRITGGAIVERSVPTTISQAGTMQLELNDMDYDTTQRVTSAINNAFG FGTAVALDGRTIQLRAPSDPAQQVQFMAQLQNLDVKPGQAAAKVILNARTGSIVMNQMVTLQNCAVAHGNLSVIVNTQPV VSQPGAFSNGQTVVAQQSQIALKQDNGALKLVSAGANLAEVVKALNALGATPADLMSILQAMKAAGALRAELEII >Mature_395_residues MRTFSFSRLKPVIGIAARAFAMVALACAALPVTTHVAHAERLKDLVQIQGVRDNPLIGYGLVVGLDGTGDQTTQTPFTTQ TLANMLANLGISINNQQAGSNSSNSSLSSMQLKNVAAVMVTASLPAFARPGEALDVTVSSLGNAKSLRGGTLLLTPLKGA DGQVYALAQGNMAVGGAGASANGSKVQVNQLAAGRITGGAIVERSVPTTISQAGTMQLELNDMDYDTTQRVTSAINNAFG FGTAVALDGRTIQLRAPSDPAQQVQFMAQLQNLDVKPGQAAAKVILNARTGSIVMNQMVTLQNCAVAHGNLSVIVNTQPV VSQPGAFSNGQTVVAQQSQIALKQDNGALKLVSAGANLAEVVKALNALGATPADLMSILQAMKAAGALRAELEII
Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]
COG id: COG1706
COG function: function code N; Flagellar basal-body P-ring protein
Gene ontology:
Cell location: Periplasm. Bacterial flagellum basal body (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgI family [H]
Homologues:
Organism=Escherichia coli, GI1787320, Length=372, Percent_Identity=61.2903225806452, Blast_Score=385, Evalue=1e-108,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001782 [H]
Pfam domain/function: PF02119 FlgI [H]
EC number: NA
Molecular weight: Translated: 40567; Mature: 40567
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTFSFSRLKPVIGIAARAFAMVALACAALPVTTHVAHAERLKDLVQIQGVRDNPLIGYG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE LVVGLDGTGDQTTQTPFTTQTLANMLANLGISINNQQAGSNSSNSSLSSMQLKNVAAVMV EEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHEEEEE TASLPAFARPGEALDVTVSSLGNAKSLRGGTLLLTPLKGADGQVYALAQGNMAVGGAGAS EECCCCCCCCCCEEEEEHHHCCCCCCCCCCEEEEEECCCCCCCEEEEECCCEEEECCCCC ANGSKVQVNQLAAGRITGGAIVERSVPTTISQAGTMQLELNDMDYDTTQRVTSAINNAFG CCCCEEEEEEEECCCCCCCEEEECCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCC FGTAVALDGRTIQLRAPSDPAQQVQFMAQLQNLDVKPGQAAAKVILNARTGSIVMNQMVT CCEEEEECCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHEEEEEECCCCHHHHHHHHH LQNCAVAHGNLSVIVNTQPVVSQPGAFSNGQTVVAQQSQIALKQDNGALKLVSAGANLAE HHHHEEECCCEEEEEECCCCCCCCCCCCCCCEEEEECCEEEEEECCCCEEEEECCCCHHH VVKALNALGATPADLMSILQAMKAAGALRAELEII HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEC >Mature Secondary Structure MRTFSFSRLKPVIGIAARAFAMVALACAALPVTTHVAHAERLKDLVQIQGVRDNPLIGYG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEE LVVGLDGTGDQTTQTPFTTQTLANMLANLGISINNQQAGSNSSNSSLSSMQLKNVAAVMV EEEEECCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHEEEEE TASLPAFARPGEALDVTVSSLGNAKSLRGGTLLLTPLKGADGQVYALAQGNMAVGGAGAS EECCCCCCCCCCEEEEEHHHCCCCCCCCCCEEEEEECCCCCCCEEEEECCCEEEECCCCC ANGSKVQVNQLAAGRITGGAIVERSVPTTISQAGTMQLELNDMDYDTTQRVTSAINNAFG CCCCEEEEEEEECCCCCCCEEEECCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCC FGTAVALDGRTIQLRAPSDPAQQVQFMAQLQNLDVKPGQAAAKVILNARTGSIVMNQMVT CCEEEEECCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHEEEEEECCCCHHHHHHHHH LQNCAVAHGNLSVIVNTQPVVSQPGAFSNGQTVVAQQSQIALKQDNGALKLVSAGANLAE HHHHEEECCCEEEEEECCCCCCCCCCCCCCCEEEEECCEEEEEECCCCEEEEECCCCHHH VVKALNALGATPADLMSILQAMKAAGALRAELEII HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA