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The map label for this gene is flgH [H]

Identifier: 186477700

GI number: 186477700

Start: 3306808

End: 3307518

Strand: Direct

Name: flgH [H]

Synonym: Bphy_2954

Alternate gene names: 186477700

Gene position: 3306808-3307518 (Clockwise)

Preceding gene: 186477699

Following gene: 186477701

Centisome position: 95.05

GC content: 63.85

Gene sequence:

>711_bases
ATGTCGCACTTCACCCGTATCCAGGTTCCTCTGCGCAGCGCGCGGGCTGTTTCCATGCTCGCGTGTGCCGGCGCGCTCGC
AGCCGCGCTCGGCGGCTGTGCACTCGTGCCGAAGCAGCCGATCACCCAGCAGCCGATGACGGCCGTCCCGCCGGCGCCGC
CGTCGCTGCAGGCGCCCGGTTCGATCTACAACCCGGGGTACGCTGGCCGGCCGCTGTTCGAAGACCAGCGTCCGCGCAAC
GTCGGCGACATCCTGACCATCGTCATTTCCGAAAACATCAACGCAACGAAGTCGTCCGGCGCGAACACGAACCGCAACGG
CGAGACCAAGTTCGGCGTGCCGACGGCGGGCTTTCTCGGCGGCCTGTTCGGCAAGGTGAACCTCGACGCGACGGGCGCCA
ACACGTTCAAGGCAACGGGCGGCGCCAATGCATCGAACACTTTCAGTGGCACGATTACCGTCACGGTGATCGGCGTGCAG
CCGAACGGCAACCTCGTCGTCAGCGGCGAGAAGCAGATGCTGATCAACCAGGGCAACGAGTTCGTGCGTTTCTCGGGTGT
GGTCAACCCGAACACGATCAGCAGCCTGAATGCCGTCTACTCGACTCAGGTCGCGGACGCGAAGATCGAGTATTCAGCCA
AGGGTTACATCGACGAGTCGCAGAACATGAGCTGGCTGCAACGCTTCTTCCTCAACGTCGCGCCGTTCTGA

Upstream 100 bases:

>100_bases
TCAACAGCAAGGCCGTGACGACCTCCGACCAGATGCTGCAGACGCTCAGCCAGATGCCGGTTTAAGGCTGACAGTCGGAA
ACAATCAGGCGGTAATCAAG

Downstream 100 bases:

>100_bases
CCATGCGAACCTTCTCTTTCTCCCGTCTGAAGCCCGTCATCGGAATCGCCGCGCGTGCGTTCGCAATGGTGGCGCTCGCG
TGCGCCGCGCTGCCCGTCAC

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSHFTRIQVPLRSARAVSMLACAGALAAALGGCALVPKQPITQQPMTAVPPAPPSLQAPGSIYNPGYAGRPLFEDQRPRN
VGDILTIVISENINATKSSGANTNRNGETKFGVPTAGFLGGLFGKVNLDATGANTFKATGGANASNTFSGTITVTVIGVQ
PNGNLVVSGEKQMLINQGNEFVRFSGVVNPNTISSLNAVYSTQVADAKIEYSAKGYIDESQNMSWLQRFFLNVAPF

Sequences:

>Translated_236_residues
MSHFTRIQVPLRSARAVSMLACAGALAAALGGCALVPKQPITQQPMTAVPPAPPSLQAPGSIYNPGYAGRPLFEDQRPRN
VGDILTIVISENINATKSSGANTNRNGETKFGVPTAGFLGGLFGKVNLDATGANTFKATGGANASNTFSGTITVTVIGVQ
PNGNLVVSGEKQMLINQGNEFVRFSGVVNPNTISSLNAVYSTQVADAKIEYSAKGYIDESQNMSWLQRFFLNVAPF
>Mature_235_residues
SHFTRIQVPLRSARAVSMLACAGALAAALGGCALVPKQPITQQPMTAVPPAPPSLQAPGSIYNPGYAGRPLFEDQRPRNV
GDILTIVISENINATKSSGANTNRNGETKFGVPTAGFLGGLFGKVNLDATGANTFKATGGANASNTFSGTITVTVIGVQP
NGNLVVSGEKQMLINQGNEFVRFSGVVNPNTISSLNAVYSTQVADAKIEYSAKGYIDESQNMSWLQRFFLNVAPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=228, Percent_Identity=56.140350877193, Blast_Score=226, Evalue=8e-61,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 24738; Mature: 24607

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHFTRIQVPLRSARAVSMLACAGALAAALGGCALVPKQPITQQPMTAVPPAPPSLQAPG
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCC
SIYNPGYAGRPLFEDQRPRNVGDILTIVISENINATKSSGANTNRNGETKFGVPTAGFLG
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCHHHHH
GLFGKVNLDATGANTFKATGGANASNTFSGTITVTVIGVQPNGNLVVSGEKQMLINQGNE
HHHEEEEECCCCCCEEEECCCCCCCCEECEEEEEEEEEECCCCCEEECCCCEEEECCCCC
FVRFSGVVNPNTISSLNAVYSTQVADAKIEYSAKGYIDESQNMSWLQRFFLNVAPF
EEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SHFTRIQVPLRSARAVSMLACAGALAAALGGCALVPKQPITQQPMTAVPPAPPSLQAPG
CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCC
SIYNPGYAGRPLFEDQRPRNVGDILTIVISENINATKSSGANTNRNGETKFGVPTAGFLG
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCHHHHH
GLFGKVNLDATGANTFKATGGANASNTFSGTITVTVIGVQPNGNLVVSGEKQMLINQGNE
HHHEEEEECCCCCCEEEECCCCCCCCEECEEEEEEEEEECCCCCEEECCCCEEEECCCCC
FVRFSGVVNPNTISSLNAVYSTQVADAKIEYSAKGYIDESQNMSWLQRFFLNVAPF
EEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA