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The map label for this gene is cidA [H]

Identifier: 186477669

GI number: 186477669

Start: 3276958

End: 3277449

Strand: Reverse

Name: cidA [H]

Synonym: Bphy_2921

Alternate gene names: 186477669

Gene position: 3277449-3276958 (Counterclockwise)

Preceding gene: 186477671

Following gene: 186477668

Centisome position: 94.2

GC content: 68.7

Gene sequence:

>492_bases
ATGATTTCGCCGTTGATCGCCCGGTTTGCCGCCTCCATCCGCCTCGATGCGACCTCACGCGTCACGAAGGTCGGCCGGAT
TGCCGTGCAGAGCGCGGCCATTGCCGGGGTCTGGTTCGCCGCCGATTTCATCGTCCGCCGATTCGGTCTGCCCGTGCCGG
GCGGCGTGGTGGGCCTGATCGCGCTGCTGGCGTTGCTGTTCTGCGGCGGAATTGCGCCGCGCTGGGTGAAGGCGGGCGCC
GACTGGCTGCTGTCGGACATGCTGTTGTTCTTCATTCCGGCTGCCGTCGCGGCCGTGCAATACGGCGGTCTGTTCCGGGA
AGACGGCTGGCGCCTCGCGCTGGTCGTGGTCGCGGGCACGCTGATGGTGATGGTAGCCGTCGCATTTGCCGTCGAGCAGG
CCGCGCGCCTTGAGCGCCGCCTCGCACTGCGTCGCGTGATGGTTCAGCGTGCGCACGTCGAGCGCCGCGCCGCCGGCCGT
CACTTCCTGTAA

Upstream 100 bases:

>100_bases
AAATTCCAAATTGGAATGAAGCGGATAATTCTAAGTCATTATATTTATGGTGCAGTGCACCCTATACTGAATCTCATCCG
AAAGTCACCTGGGGTTTGCC

Downstream 100 bases:

>100_bases
TCCGCTTCCGAACCGTTCCGCCCATGAGCGCCTTCTACTCGTCCCTTTTCGCCGACGACGCTTCCGGGCTCATCGCCGCT
GGCTGCTTCGTGCTGACGGT

Product: LrgA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MISPLIARFAASIRLDATSRVTKVGRIAVQSAAIAGVWFAADFIVRRFGLPVPGGVVGLIALLALLFCGGIAPRWVKAGA
DWLLSDMLLFFIPAAVAAVQYGGLFREDGWRLALVVVAGTLMVMVAVAFAVEQAARLERRLALRRVMVQRAHVERRAAGR
HFL

Sequences:

>Translated_163_residues
MISPLIARFAASIRLDATSRVTKVGRIAVQSAAIAGVWFAADFIVRRFGLPVPGGVVGLIALLALLFCGGIAPRWVKAGA
DWLLSDMLLFFIPAAVAAVQYGGLFREDGWRLALVVVAGTLMVMVAVAFAVEQAARLERRLALRRVMVQRAHVERRAAGR
HFL
>Mature_163_residues
MISPLIARFAASIRLDATSRVTKVGRIAVQSAAIAGVWFAADFIVRRFGLPVPGGVVGLIALLALLFCGGIAPRWVKAGA
DWLLSDMLLFFIPAAVAAVQYGGLFREDGWRLALVVVAGTLMVMVAVAFAVEQAARLERRLALRRVMVQRAHVERRAAGR
HFL

Specific function: Increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation. Inhibited by the antiholin-like proteins LrgAB. In an unstressed cell, the LrgAB products probably inhibit the function of the CidA protein. W

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CidA/LrgA family. CidA subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 17622; Mature: 17622

Theoretical pI: Translated: 12.21; Mature: 12.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISPLIARFAASIRLDATSRVTKVGRIAVQSAAIAGVWFAADFIVRRFGLPVPGGVVGLI
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ALLALLFCGGIAPRWVKAGADWLLSDMLLFFIPAAVAAVQYGGLFREDGWRLALVVVAGT
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHH
LMVMVAVAFAVEQAARLERRLALRRVMVQRAHVERRAAGRHFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MISPLIARFAASIRLDATSRVTKVGRIAVQSAAIAGVWFAADFIVRRFGLPVPGGVVGLI
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
ALLALLFCGGIAPRWVKAGADWLLSDMLLFFIPAAVAAVQYGGLFREDGWRLALVVVAGT
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHH
LMVMVAVAFAVEQAARLERRLALRRVMVQRAHVERRAAGRHFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA