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The map label for this gene is yibD [H]

Identifier: 186477667

GI number: 186477667

Start: 3275275

End: 3276090

Strand: Reverse

Name: yibD [H]

Synonym: Bphy_2919

Alternate gene names: 186477667

Gene position: 3276090-3275275 (Counterclockwise)

Preceding gene: 186477668

Following gene: 186477666

Centisome position: 94.16

GC content: 65.2

Gene sequence:

>816_bases
ATGCATCCCGTCTCCGTCATCATTCCCTGCTACAACGCCGAACGCACGCTGGCACGCACGCTGGAGAGCTGCGTTGCACA
ACAGGAAGCGGCGCAGATCATCGTGGTCGATGACGGCTCGCAGGACGCTTCACGCGACATCGCCGCGCAATTCGCGCACC
GCTTTTCGCAAATCCAGTCGCTGCACATGCCGTATAACGGCGGCGCGTCGCGCGCGCGGAACTGGGGCGCGATGCACGCG
CGGCATCCGCTGCTCGCCTTCATCGACGCGGACGATGAATATCTGCCCGGCGCCCTCGCTGCTGCCGCCGCCTTCCTGCA
CGAGCATCCGCGGCAGCCGTCGATCCGCATCGACGTCGAGTATTGCGGCTTTCCCGCCGACATCACGTCCCATCCGCAGT
TCAAGGAACACGCGGCGACGCTCAGCAACACGGTGCCGAGCAGCCTCGTGATCCGGCGCTCGCTCTACGCGGCGTTTGGC
GGCTTTCCGCTCGATGACGTGTTCCGGCGCCACGGCGGCGAAGACGGCGCGTTCTCGCTCGCGCTGCTGAATATCTTCGG
CAATCCGCGGCTCGACGACTGCAAGCGCGTGCGCATGCACTATCACCCGAACATCCACGCCGAGCGGTATTTCCGCATTT
CGATGGGCATGCTCGACGCGTCGGCTGAACTCGTCGATTCCACGCGCGAAGCGTCGTGGCGCTTCGTGCGTCACGCCTAC
GACGCCGTCAGGGAATTGCGCGACGCCGAACTCGCGCCATATCTGAGCGCGCAACCGCAACCCGCAATGGCATCCGCGCC
GACTCAATCGGCATAG

Upstream 100 bases:

>100_bases
GTGTTTTGACTCGGCGCTGCACCGGGACTATTTTGGGATGAATGCCGTCGCGTGCGTCTTATGATCACCGACGTTACTCA
CTCCGAGGCCGGTTCAGGCG

Downstream 100 bases:

>100_bases
GCCGGAATCGCGGCACCCGTTCGCCATCTCGTTTTGCTACAATCGCCGTTCGTCTTCGAGGAGCGTTGCGACGGGTTCGG
CCCGCCAGGCTCGAAGGCTT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MHPVSVIIPCYNAERTLARTLESCVAQQEAAQIIVVDDGSQDASRDIAAQFAHRFSQIQSLHMPYNGGASRARNWGAMHA
RHPLLAFIDADDEYLPGALAAAAAFLHEHPRQPSIRIDVEYCGFPADITSHPQFKEHAATLSNTVPSSLVIRRSLYAAFG
GFPLDDVFRRHGGEDGAFSLALLNIFGNPRLDDCKRVRMHYHPNIHAERYFRISMGMLDASAELVDSTREASWRFVRHAY
DAVRELRDAELAPYLSAQPQPAMASAPTQSA

Sequences:

>Translated_271_residues
MHPVSVIIPCYNAERTLARTLESCVAQQEAAQIIVVDDGSQDASRDIAAQFAHRFSQIQSLHMPYNGGASRARNWGAMHA
RHPLLAFIDADDEYLPGALAAAAAFLHEHPRQPSIRIDVEYCGFPADITSHPQFKEHAATLSNTVPSSLVIRRSLYAAFG
GFPLDDVFRRHGGEDGAFSLALLNIFGNPRLDDCKRVRMHYHPNIHAERYFRISMGMLDASAELVDSTREASWRFVRHAY
DAVRELRDAELAPYLSAQPQPAMASAPTQSA
>Mature_271_residues
MHPVSVIIPCYNAERTLARTLESCVAQQEAAQIIVVDDGSQDASRDIAAQFAHRFSQIQSLHMPYNGGASRARNWGAMHA
RHPLLAFIDADDEYLPGALAAAAAFLHEHPRQPSIRIDVEYCGFPADITSHPQFKEHAATLSNTVPSSLVIRRSLYAAFG
GFPLDDVFRRHGGEDGAFSLALLNIFGNPRLDDCKRVRMHYHPNIHAERYFRISMGMLDASAELVDSTREASWRFVRHAY
DAVRELRDAELAPYLSAQPQPAMASAPTQSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=96, Percent_Identity=42.7083333333333, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1787259, Length=203, Percent_Identity=28.0788177339901, Blast_Score=61, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 30051; Mature: 30051

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPVSVIIPCYNAERTLARTLESCVAQQEAAQIIVVDDGSQDASRDIAAQFAHRFSQIQS
CCCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
LHMPYNGGASRARNWGAMHARHPLLAFIDADDEYLPGALAAAAAFLHEHPRQPSIRIDVE
HCCCCCCCHHHHCCCCCHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEE
YCGFPADITSHPQFKEHAATLSNTVPSSLVIRRSLYAAFGGFPLDDVFRRHGGEDGAFSL
ECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHE
ALLNIFGNPRLDDCKRVRMHYHPNIHAERYFRISMGMLDASAELVDSTREASWRFVRHAY
EEEEHHCCCCCCHHHHHHHHCCCCCCHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
DAVRELRDAELAPYLSAQPQPAMASAPTQSA
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHPVSVIIPCYNAERTLARTLESCVAQQEAAQIIVVDDGSQDASRDIAAQFAHRFSQIQS
CCCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
LHMPYNGGASRARNWGAMHARHPLLAFIDADDEYLPGALAAAAAFLHEHPRQPSIRIDVE
HCCCCCCCHHHHCCCCCHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEE
YCGFPADITSHPQFKEHAATLSNTVPSSLVIRRSLYAAFGGFPLDDVFRRHGGEDGAFSL
ECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHE
ALLNIFGNPRLDDCKRVRMHYHPNIHAERYFRISMGMLDASAELVDSTREASWRFVRHAY
EEEEHHCCCCCCHHHHHHHHCCCCCCHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
DAVRELRDAELAPYLSAQPQPAMASAPTQSA
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2647748 [H]