| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is ahcY [H]
Identifier: 186477666
GI number: 186477666
Start: 3273656
End: 3275077
Strand: Reverse
Name: ahcY [H]
Synonym: Bphy_2918
Alternate gene names: 186477666
Gene position: 3275077-3273656 (Counterclockwise)
Preceding gene: 186477667
Following gene: 186477665
Centisome position: 94.13
GC content: 61.11
Gene sequence:
>1422_bases ATGAACGCCGCAGTTATCGATTCCAAACATTCCCAGGATTTCATCGTTGCCGACCTGTCGCTTGCCGATTGGGGCCGCAA GGAACTCGACATCGCCGAAACGGAAATGCCCGGCCTCGTGCAAATCCGTGAAGAGTACAAGGCGCAGCAGCCGCTGAAGG GCGCGCGCGTTGCCGGCTCGCTGCACATGACGATCCAGACGGGCGTGCTGATCGAGACGCTGAAGGCGCTGGGCGCCGAC GTGCGCTGGGCATCGTGCAACATCTTCTCGACGCAGGACCACGCCGCGGCTGCCATCGCGAAGGGCGGCACGCCCGTATT CGCGTTCAAGGGCGAATCGCTCGACGAATACTGGGAGTTCTCGCACCGCATCTTCGAATGGCCAAACGGCGAATTCGCGA ACATGATCCTCGACGACGGCGGCGACGCAACGCTGCTGCTGATCCTCGGCTCGAAGGCAGAGAAGGATCGCTCGGTAATC TCGAAGCCGACCAACGAAGAAGAAGTCGCGCTGTACAAGTCGATCGCCCGTCATCTGGACGCGGATCCCGTGTGGTACTC CACGCGTCTCGCGCACATCAAGGGCGTCACGGAAGAAACGACGACGGGCGTGCATCGCCTGTATCAGATGGAGAAGGAAG GCCGTCTGCCGTTCCCGGCAATCAACGTGAACGACTCGGTCACGAAGTCGAAGTTCGACAACCTGTATGGCTGCCGCGAA TCGCTGGTCGACGGCATCAAGCGCGCGACGGACGTAATGATTGCCGGCAAGATCGCGGTCGTCGCGGGTTATGGCGACGT GGGCAAGGGATGCGCGCAATCGCTGCGCGGTCTGGGCGCGACCGTGTGGGTCACGGAAATCGACCCGATCTGCGCGCTGC AAGCCGCGATGGAAGGCTACCGCGTCGTGACGATGGAATACGCTGCCGACAAGGCCGACATCTTCGTGACGGCAACGGGC AACTACCACGTGATCGGCCACGATCACATGAAGGCGATGCGTCACAACGCGATCGTCTGCAACATCGGTCACTTCGACTC GGAAATCGACGTTGCTTCGACGCGCCAGTACACGTGGGAAAACATCAAGCCGCAAGTCGACCACATCATCTTCCCGGACG GCAAGCGCGTGATCCTTCTGGCCGAAGGCCGCCTCGTGAACCTGGGCTGCGCGACGGGCCACCCGTCGTTCGTGATGTCG AACTCGTTCACGAACCAGACGCTCGCGCAGATCGAGTTGTTCGTCGAAGGCAGCAAGTACGAGAACAAGGTTTATGTTCT GCCGAAGCAGCTCGACGAGAAAGTCGCGCGCCTGCACCTCGCGCGCATCGGCGCGAACCTGACGGAGTTGACGTCGGAAC AGGCGGGCTACATCGGCGTCGACAAGAACGGTCCGTTCAAGCCGAACCACTACCGTTACTAA
Upstream 100 bases:
>100_bases CTTTCAATCGGAAGGATTGGACGCGCGCCGCGCTAACAACCCAACCGCATCGAACGGCGCTCACGTCACATTTCTAGTCT TTTTTAGAAAGGAGGGCGTG
Downstream 100 bases:
>100_bases ACCGCAAACAGGCGGCATGAAGGGTGCGGGCGCATGCCACGGCGTGCCCCGCACCGGATGAAGCACGCAGCCGATGCGAC GCATTGCATCGGGTGACGCT
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MNAAVIDSKHSQDFIVADLSLADWGRKELDIAETEMPGLVQIREEYKAQQPLKGARVAGSLHMTIQTGVLIETLKALGAD VRWASCNIFSTQDHAAAAIAKGGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMILDDGGDATLLLILGSKAEKDRSVI SKPTNEEEVALYKSIARHLDADPVWYSTRLAHIKGVTEETTTGVHRLYQMEKEGRLPFPAINVNDSVTKSKFDNLYGCRE SLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTATG NYHVIGHDHMKAMRHNAIVCNIGHFDSEIDVASTRQYTWENIKPQVDHIIFPDGKRVILLAEGRLVNLGCATGHPSFVMS NSFTNQTLAQIELFVEGSKYENKVYVLPKQLDEKVARLHLARIGANLTELTSEQAGYIGVDKNGPFKPNHYRY
Sequences:
>Translated_473_residues MNAAVIDSKHSQDFIVADLSLADWGRKELDIAETEMPGLVQIREEYKAQQPLKGARVAGSLHMTIQTGVLIETLKALGAD VRWASCNIFSTQDHAAAAIAKGGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMILDDGGDATLLLILGSKAEKDRSVI SKPTNEEEVALYKSIARHLDADPVWYSTRLAHIKGVTEETTTGVHRLYQMEKEGRLPFPAINVNDSVTKSKFDNLYGCRE SLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTATG NYHVIGHDHMKAMRHNAIVCNIGHFDSEIDVASTRQYTWENIKPQVDHIIFPDGKRVILLAEGRLVNLGCATGHPSFVMS NSFTNQTLAQIELFVEGSKYENKVYVLPKQLDEKVARLHLARIGANLTELTSEQAGYIGVDKNGPFKPNHYRY >Mature_473_residues MNAAVIDSKHSQDFIVADLSLADWGRKELDIAETEMPGLVQIREEYKAQQPLKGARVAGSLHMTIQTGVLIETLKALGAD VRWASCNIFSTQDHAAAAIAKGGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMILDDGGDATLLLILGSKAEKDRSVI SKPTNEEEVALYKSIARHLDADPVWYSTRLAHIKGVTEETTTGVHRLYQMEKEGRLPFPAINVNDSVTKSKFDNLYGCRE SLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTATG NYHVIGHDHMKAMRHNAIVCNIGHFDSEIDVASTRQYTWENIKPQVDHIIFPDGKRVILLAEGRLVNLGCATGHPSFVMS NSFTNQTLAQIELFVEGSKYENKVYVLPKQLDEKVARLHLARIGANLTELTSEQAGYIGVDKNGPFKPNHYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=462, Percent_Identity=59.95670995671, Blast_Score=525, Evalue=1e-149, Organism=Homo sapiens, GI239937451, Length=440, Percent_Identity=59.5454545454545, Blast_Score=494, Evalue=1e-140, Organism=Homo sapiens, GI24308043, Length=470, Percent_Identity=51.063829787234, Blast_Score=487, Evalue=1e-137, Organism=Homo sapiens, GI298286489, Length=470, Percent_Identity=51.063829787234, Blast_Score=486, Evalue=1e-137, Organism=Homo sapiens, GI195539337, Length=470, Percent_Identity=51.063829787234, Blast_Score=486, Evalue=1e-137, Organism=Homo sapiens, GI195539349, Length=470, Percent_Identity=51.063829787234, Blast_Score=486, Evalue=1e-137, Organism=Homo sapiens, GI21361647, Length=470, Percent_Identity=50.6382978723404, Blast_Score=469, Evalue=1e-132, Organism=Caenorhabditis elegans, GI17506425, Length=465, Percent_Identity=58.9247311827957, Blast_Score=522, Evalue=1e-148, Organism=Saccharomyces cerevisiae, GI6320882, Length=483, Percent_Identity=57.5569358178054, Blast_Score=513, Evalue=1e-146, Organism=Drosophila melanogaster, GI24642172, Length=462, Percent_Identity=60.3896103896104, Blast_Score=531, Evalue=1e-151, Organism=Drosophila melanogaster, GI24656245, Length=471, Percent_Identity=50.3184713375796, Blast_Score=472, Evalue=1e-133, Organism=Drosophila melanogaster, GI45553387, Length=469, Percent_Identity=49.8933901918977, Blast_Score=454, Evalue=1e-128, Organism=Drosophila melanogaster, GI45553385, Length=468, Percent_Identity=49.7863247863248, Blast_Score=451, Evalue=1e-127,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 52205; Mature: 52205
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAAVIDSKHSQDFIVADLSLADWGRKELDIAETEMPGLVQIREEYKAQQPLKGARVAGS CCCEEECCCCCCCEEEEEEEHHCCCCCCCCCHHCCCCCHHHHHHHHHHCCCCCCCEEECE LHMTIQTGVLIETLKALGADVRWASCNIFSTQDHAAAAIAKGGTPVFAFKGESLDEYWEF EEEEEECCHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHCCCCEEEEEECCCHHHHHHH SHRIFEWPNGEFANMILDDGGDATLLLILGSKAEKDRSVISKPTNEEEVALYKSIARHLD HHHEEECCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHCC ADPVWYSTRLAHIKGVTEETTTGVHRLYQMEKEGRLPFPAINVNDSVTKSKFDNLYGCRE CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHH SLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGY HHHHHHHHHHHEEEECEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCE RVVTMEYAADKADIFVTATGNYHVIGHDHMKAMRHNAIVCNIGHFDSEIDVASTRQYTWE EEEEEEECCCCCCEEEEECCCEEEEEHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCC NIKPQVDHIIFPDGKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFVEGSKY CCCCCCCEEECCCCCEEEEEECCEEEEEEECCCCCCEEEECCCCCCEEEEEEEEEECCCC ENKVYVLPKQLDEKVARLHLARIGANLTELTSEQAGYIGVDKNGPFKPNHYRY CCEEEEECHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure MNAAVIDSKHSQDFIVADLSLADWGRKELDIAETEMPGLVQIREEYKAQQPLKGARVAGS CCCEEECCCCCCCEEEEEEEHHCCCCCCCCCHHCCCCCHHHHHHHHHHCCCCCCCEEECE LHMTIQTGVLIETLKALGADVRWASCNIFSTQDHAAAAIAKGGTPVFAFKGESLDEYWEF EEEEEECCHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHCCCCEEEEEECCCHHHHHHH SHRIFEWPNGEFANMILDDGGDATLLLILGSKAEKDRSVISKPTNEEEVALYKSIARHLD HHHEEECCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHCC ADPVWYSTRLAHIKGVTEETTTGVHRLYQMEKEGRLPFPAINVNDSVTKSKFDNLYGCRE CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHH SLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGY HHHHHHHHHHHEEEECEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCE RVVTMEYAADKADIFVTATGNYHVIGHDHMKAMRHNAIVCNIGHFDSEIDVASTRQYTWE EEEEEEECCCCCCEEEEECCCEEEEEHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCC NIKPQVDHIIFPDGKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFVEGSKY CCCCCCCEEECCCCCEEEEEECCEEEEEEECCCCCCEEEECCCCCCEEEEEEEEEECCCC ENKVYVLPKQLDEKVARLHLARIGANLTELTSEQAGYIGVDKNGPFKPNHYRY CCEEEEECHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA