Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186477654

Identifier: 186477654

GI number: 186477654

Start: 3260671

End: 3261435

Strand: Direct

Name: 186477654

Synonym: Bphy_2906

Alternate gene names: NA

Gene position: 3260671-3261435 (Clockwise)

Preceding gene: 186477653

Following gene: 186477655

Centisome position: 93.72

GC content: 63.66

Gene sequence:

>765_bases
ATGCAGTCAACCGTCAACCTATGGCCGCTCATTGGAGTCGCGGTCATCATCATCGGGTTCTTGTTGCGCTTTAATCCAAT
GCTGATCGTGGCCGCCGCCGCCGTCATCACCGCGATCGCCGCGCATTTTCCACCGGACAAGATTCTCGCCGCAATCGGCA
GCGGCTTCATCAAGACGCGCAACATTCCCCTCATCATCCTGCTGCCGCTCGCGGTGATCGGTTTGCTCGAGCGGCACGGG
CTGCGCGAGCGCGCGCAGGCGTGGATCGCGAGCATCAAGGCCGCGACGGCCGGGCGTCTCCTGATCGTCTATCTGCTCGT
GCGCGAGTTGACTGCGGCCGTCGGTCTGACGGGTCTCGGCGGGCATCCGCAGATGGTGCGCCCGCTGATCGCGCCGATGG
CGGAAGGCGCCACGGAGACGCGCTTCGGCAAGCTCACCGATGCAGTGCGCTACAAGCTGCGCGCGTTCTCGGCGGCGACC
GACAACGTCGGTCTCTTCTTCGGCGAGGACATCTTCGTCGCGTTCGGCGCAATCGTGCTGATGGTCACGTTCCTGAGGGA
AGCGGGCATCACCGTCGAGCCGATGCATGTCGCCGTGTGGGGCATTCCGACGGCCATTTGCGCGTTCCTGATTCACGGCT
TCCGGCTGTATCTGCTCGATCGCAAGCTCGAACGCGAACTGCGCGGCAACGCGGCGAAACCGACTGGCGCAAACATCAAT
AACAACACAACGGGCAAGCCCGCGACGACTGGGGACGAAGCATGA

Upstream 100 bases:

>100_bases
GCACGCAACGAGGGCAACCGGGCCGACACGCATCGGCCGGATTCGTAAAGTTCGCCGCCACGAGCGGTGTCCCAATGCAG
GACCACCTCTGGAGAGATCG

Downstream 100 bases:

>100_bases
CACTCACCATCAACTATTTGTTCTGGCTGGTCGGCATCGTACTGCTGGTGATCGGCGGCATGATCGCCGTCGATCGCGAC
CATCCGCGCCGCTTCACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MQSTVNLWPLIGVAVIIIGFLLRFNPMLIVAAAAVITAIAAHFPPDKILAAIGSGFIKTRNIPLIILLPLAVIGLLERHG
LRERAQAWIASIKAATAGRLLIVYLLVRELTAAVGLTGLGGHPQMVRPLIAPMAEGATETRFGKLTDAVRYKLRAFSAAT
DNVGLFFGEDIFVAFGAIVLMVTFLREAGITVEPMHVAVWGIPTAICAFLIHGFRLYLLDRKLERELRGNAAKPTGANIN
NNTTGKPATTGDEA

Sequences:

>Translated_254_residues
MQSTVNLWPLIGVAVIIIGFLLRFNPMLIVAAAAVITAIAAHFPPDKILAAIGSGFIKTRNIPLIILLPLAVIGLLERHG
LRERAQAWIASIKAATAGRLLIVYLLVRELTAAVGLTGLGGHPQMVRPLIAPMAEGATETRFGKLTDAVRYKLRAFSAAT
DNVGLFFGEDIFVAFGAIVLMVTFLREAGITVEPMHVAVWGIPTAICAFLIHGFRLYLLDRKLERELRGNAAKPTGANIN
NNTTGKPATTGDEA
>Mature_254_residues
MQSTVNLWPLIGVAVIIIGFLLRFNPMLIVAAAAVITAIAAHFPPDKILAAIGSGFIKTRNIPLIILLPLAVIGLLERHG
LRERAQAWIASIKAATAGRLLIVYLLVRELTAAVGLTGLGGHPQMVRPLIAPMAEGATETRFGKLTDAVRYKLRAFSAAT
DNVGLFFGEDIFVAFGAIVLMVTFLREAGITVEPMHVAVWGIPTAICAFLIHGFRLYLLDRKLERELRGNAAKPTGANIN
NNTTGKPATTGDEA

Specific function: Unknown

COG id: COG3819

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27210; Mature: 27210

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSTVNLWPLIGVAVIIIGFLLRFNPMLIVAAAAVITAIAAHFPPDKILAAIGSGFIKTR
CCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEC
NIPLIILLPLAVIGLLERHGLRERAQAWIASIKAATAGRLLIVYLLVRELTAAVGLTGLG
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GHPQMVRPLIAPMAEGATETRFGKLTDAVRYKLRAFSAATDNVGLFFGEDIFVAFGAIVL
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHH
MVTFLREAGITVEPMHVAVWGIPTAICAFLIHGFRLYLLDRKLERELRGNAAKPTGANIN
HHHHHHHCCCEECCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
NNTTGKPATTGDEA
CCCCCCCCCCCCCC
>Mature Secondary Structure
MQSTVNLWPLIGVAVIIIGFLLRFNPMLIVAAAAVITAIAAHFPPDKILAAIGSGFIKTR
CCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEC
NIPLIILLPLAVIGLLERHGLRERAQAWIASIKAATAGRLLIVYLLVRELTAAVGLTGLG
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GHPQMVRPLIAPMAEGATETRFGKLTDAVRYKLRAFSAATDNVGLFFGEDIFVAFGAIVL
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHH
MVTFLREAGITVEPMHVAVWGIPTAICAFLIHGFRLYLLDRKLERELRGNAAKPTGANIN
HHHHHHHCCCEECCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
NNTTGKPATTGDEA
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA