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The map label for this gene is ybgL [C]

Identifier: 186477653

GI number: 186477653

Start: 3259642

End: 3260394

Strand: Direct

Name: ybgL [C]

Synonym: Bphy_2905

Alternate gene names: 186477653

Gene position: 3259642-3260394 (Clockwise)

Preceding gene: 186477652

Following gene: 186477654

Centisome position: 93.69

GC content: 68.13

Gene sequence:

>753_bases
ATGGAAATCGACCTGAACGCCGATCTCGGCGAAGGATGCGGCTCGGACGAGGCACTGCTCGATCTCGTCAGCTCGGCGAA
CATCGCGTGCGGCTGGCATGCAGGCGGGCCGAACGCGATGCGCGAATGCGTGCGCTGGGCCGTCGAGAAAGGCGTGTCGA
TCGGCGCGCATCCGAGCTTCAACGACCCGGAAAACTTCGGCCGCAAGGAAATGGATTTGCCTGCGGGCGAGATCTACGCT
GGCGTGCTGTATCAACTCGGCGCGCTGTCGGCGATCGCGCAGGCGGAAGGCGGCCGCATCGCACACGTGAAGCCGCACGG
CGCACTCTATAACCAGGCCGCGCGCGACCCGAAGATCGCTGACGCGATCGTCTCCGCCGTGCACGACTTCGATCCTTCCG
TGGCCGTGTTTGCGCTTGCGAACAGCGGCCTCGTCACGGCCGCGCGCAATGCCGGACTGGTCGCGATCGAGGAAGTCTTC
GCCGATCGCGGCTATCGCGCGGACGGCTCGCTCGTGCCGCGCAAGGAGCCGGGCGCGATGCTCGACGACGAGGACGAGGT
GCTCGCACGCACGCTGACGATGGTGCGCGAGCAGCGCGTGCAGGCGTTGAGCGGCGAGTGGGTGCCGCTCAACGCGCAGA
CCATCTGCCTGCACGGCGACGGCCCGCATGCGCTGGCGTTCGCGCGCCGCATCCGCAACGCGCTCGAAGCGGCGGGAATC
GGCGTGCATGCAGCCAACGCGGTGCGCGTCTGA

Upstream 100 bases:

>100_bases
CGCAAGTACTTGCGGCAGATCGATGCCGCGATCGGCATGCATGAAGAACGCTGCGCGCGCGTTGCTGCGTCCGCAGCGGT
GTAAGACCAATGAGGACATC

Downstream 100 bases:

>100_bases
TTCGCGCCGCCAGTCAGGCATCAGTCGACGCCCCGCTTCATGCGGGGCGTTTGCCAAAAGCGACACAGATAGTTGCCAAC
GGCTTTTTGACGCATCAGAA

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MEIDLNADLGEGCGSDEALLDLVSSANIACGWHAGGPNAMRECVRWAVEKGVSIGAHPSFNDPENFGRKEMDLPAGEIYA
GVLYQLGALSAIAQAEGGRIAHVKPHGALYNQAARDPKIADAIVSAVHDFDPSVAVFALANSGLVTAARNAGLVAIEEVF
ADRGYRADGSLVPRKEPGAMLDDEDEVLARTLTMVREQRVQALSGEWVPLNAQTICLHGDGPHALAFARRIRNALEAAGI
GVHAANAVRV

Sequences:

>Translated_250_residues
MEIDLNADLGEGCGSDEALLDLVSSANIACGWHAGGPNAMRECVRWAVEKGVSIGAHPSFNDPENFGRKEMDLPAGEIYA
GVLYQLGALSAIAQAEGGRIAHVKPHGALYNQAARDPKIADAIVSAVHDFDPSVAVFALANSGLVTAARNAGLVAIEEVF
ADRGYRADGSLVPRKEPGAMLDDEDEVLARTLTMVREQRVQALSGEWVPLNAQTICLHGDGPHALAFARRIRNALEAAGI
GVHAANAVRV
>Mature_250_residues
MEIDLNADLGEGCGSDEALLDLVSSANIACGWHAGGPNAMRECVRWAVEKGVSIGAHPSFNDPENFGRKEMDLPAGEIYA
GVLYQLGALSAIAQAEGGRIAHVKPHGALYNQAARDPKIADAIVSAVHDFDPSVAVFALANSGLVTAARNAGLVAIEEVF
ADRGYRADGSLVPRKEPGAMLDDEDEVLARTLTMVREQRVQALSGEWVPLNAQTICLHGDGPHALAFARRIRNALEAAGI
GVHAANAVRV

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family

Homologues:

Organism=Escherichia coli, GI1786931, Length=244, Percent_Identity=59.8360655737705, Blast_Score=305, Evalue=3e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2905_BURP8 (B2JIN1)

Other databases:

- EMBL:   CP001043
- RefSeq:   YP_001859123.1
- ProteinModelPortal:   B2JIN1
- GeneID:   6244388
- GenomeReviews:   CP001043_GR
- KEGG:   bph:Bphy_2905
- HOGENOM:   HBG482818
- OMA:   QTICLHG
- ProtClustDB:   PRK05406
- HAMAP:   MF_00691
- InterPro:   IPR011330
- InterPro:   IPR005501

Pfam domain/function: PF03746 LamB_YcsF; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 26321; Mature: 26321

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIDLNADLGEGCGSDEALLDLVSSANIACGWHAGGPNAMRECVRWAVEKGVSIGAHPSF
CEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCEECCCCCC
NDPENFGRKEMDLPAGEIYAGVLYQLGALSAIAQAEGGRIAHVKPHGALYNQAARDPKIA
CCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCHHH
DAIVSAVHDFDPSVAVFALANSGLVTAARNAGLVAIEEVFADRGYRADGSLVPRKEPGAM
HHHHHHHHCCCCCEEEEEEECCCEEEECCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCC
LDDEDEVLARTLTMVREQRVQALSGEWVPLNAQTICLHGDGPHALAFARRIRNALEAAGI
CCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHCC
GVHAANAVRV
CEECCCEECC
>Mature Secondary Structure
MEIDLNADLGEGCGSDEALLDLVSSANIACGWHAGGPNAMRECVRWAVEKGVSIGAHPSF
CEEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCEECCCCCC
NDPENFGRKEMDLPAGEIYAGVLYQLGALSAIAQAEGGRIAHVKPHGALYNQAARDPKIA
CCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCHHH
DAIVSAVHDFDPSVAVFALANSGLVTAARNAGLVAIEEVFADRGYRADGSLVPRKEPGAM
HHHHHHHHCCCCCEEEEEEECCCEEEECCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCC
LDDEDEVLARTLTMVREQRVQALSGEWVPLNAQTICLHGDGPHALAFARRIRNALEAAGI
CCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHCC
GVHAANAVRV
CEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA