Click here to switch to the map view.

The map label for this gene is yacF [C]

Identifier: 186477407

GI number: 186477407

Start: 2999953

End: 3000708

Strand: Direct

Name: yacF [C]

Synonym: Bphy_2659

Alternate gene names: 186477407

Gene position: 2999953-3000708 (Clockwise)

Preceding gene: 186477406

Following gene: 186477408

Centisome position: 86.23

GC content: 60.19

Gene sequence:

>756_bases
TTGATTCTTTACGAGTATCCCTTCAATGAGCGAATCCGGACGCTGCTGCGCCTCGAAGATCTGTTCGAGCGCTTCACGTT
CTTTCTGACTCAGGAAGATGCCAGGGAACATCACGTCGCGCTGACTACGCTGTTCGAAATCGCCGAAGTCGCGGGCCGCG
CGGATCTCAAGTCCGATCTGATGAAGGAACTGGAGCGGCAGCGTCAAACGCTCGCTCCGTTTCGCGGCAATCCGGGCATC
GAGCAAAATGCGTTAGAAGCCGTCCTCGGCGAAATGGAACAGACGCTGGCGGGGCTCACGCAAATGCAAGGCAAGACTGG
CCAGCATCTTGCGGACAATGAGTGGCTTGCCAGCATCCGCAGCAGGGCTATCATCCCCGGCGGCACCTGCAAGTTCGATC
TTCCTTCGTACTACGCGTGGCAGCAGACGCATCCTGACCAGCGACGCCAGGACATCGCCAAGTGGATCATGCCCCTCCTG
CCGCTGCGCGACGCGGCCGCCATCGTGCTGCGACTCGCGCGCGAATCGGGGCAGGCGTCGAAAGTCATGGCGATGCAGGG
GAGCTATCAGCAGATGCTGTCGGGCCGCACGTATCAGCTGATGCAGGTACGCGTGGCACCGGAGTTGCGCGTGATCCCGG
AAGCAAGCGCCAACAAGTACATGCTGTGGGTGCGCTTTACGGTGCAGGATGGCGATCTGCGTCCGCGCGCAGTCGATGTC
GACGTACCGTTCCAGTTGACACTGTGCAGTCTTTAA

Upstream 100 bases:

>100_bases
TGACGGAGGCCCGCTGAAAAAGTGCGTGATTGCGAGGGTAGTCTCACGGCATTAGAATGTCCTGCAATTCCGTCACCGAC
CACGCCCGAGGCGAGCCCGC

Downstream 100 bases:

>100_bases
CCCGACGCAAACAACCCCACCTGTGTGGTGTTATCGATTGCGATTGAACGTCTGATCGAATGGTCACTGTAGTCAAATGC
CCGAGCTGCGGAAGGGATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MILYEYPFNERIRTLLRLEDLFERFTFFLTQEDAREHHVALTTLFEIAEVAGRADLKSDLMKELERQRQTLAPFRGNPGI
EQNALEAVLGEMEQTLAGLTQMQGKTGQHLADNEWLASIRSRAIIPGGTCKFDLPSYYAWQQTHPDQRRQDIAKWIMPLL
PLRDAAAIVLRLARESGQASKVMAMQGSYQQMLSGRTYQLMQVRVAPELRVIPEASANKYMLWVRFTVQDGDLRPRAVDV
DVPFQLTLCSL

Sequences:

>Translated_251_residues
MILYEYPFNERIRTLLRLEDLFERFTFFLTQEDAREHHVALTTLFEIAEVAGRADLKSDLMKELERQRQTLAPFRGNPGI
EQNALEAVLGEMEQTLAGLTQMQGKTGQHLADNEWLASIRSRAIIPGGTCKFDLPSYYAWQQTHPDQRRQDIAKWIMPLL
PLRDAAAIVLRLARESGQASKVMAMQGSYQQMLSGRTYQLMQVRVAPELRVIPEASANKYMLWVRFTVQDGDLRPRAVDV
DVPFQLTLCSL
>Mature_251_residues
MILYEYPFNERIRTLLRLEDLFERFTFFLTQEDAREHHVALTTLFEIAEVAGRADLKSDLMKELERQRQTLAPFRGNPGI
EQNALEAVLGEMEQTLAGLTQMQGKTGQHLADNEWLASIRSRAIIPGGTCKFDLPSYYAWQQTHPDQRRQDIAKWIMPLL
PLRDAAAIVLRLARESGQASKVMAMQGSYQQMLSGRTYQLMQVRVAPELRVIPEASANKYMLWVRFTVQDGDLRPRAVDV
DVPFQLTLCSL

Specific function: Unknown

COG id: COG4582

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0289 family [H]

Homologues:

Organism=Escherichia coli, GI1786291, Length=251, Percent_Identity=30.6772908366534, Blast_Score=125, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009777 [H]

Pfam domain/function: PF07072 DUF1342 [H]

EC number: NA

Molecular weight: Translated: 28785; Mature: 28785

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILYEYPFNERIRTLLRLEDLFERFTFFLTQEDAREHHVALTTLFEIAEVAGRADLKSDL
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MKELERQRQTLAPFRGNPGIEQNALEAVLGEMEQTLAGLTQMQGKTGQHLADNEWLASIR
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
SRAIIPGGTCKFDLPSYYAWQQTHPDQRRQDIAKWIMPLLPLRDAAAIVLRLARESGQAS
HCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHH
KVMAMQGSYQQMLSGRTYQLMQVRVAPELRVIPEASANKYMLWVRFTVQDGDLRPRAVDV
HHHHHCCCHHHHHCCCCEEEEEEEECCCEEECCCCCCCEEEEEEEEEEECCCCCCEEEEE
DVPFQLTLCSL
CCCCEEEEECC
>Mature Secondary Structure
MILYEYPFNERIRTLLRLEDLFERFTFFLTQEDAREHHVALTTLFEIAEVAGRADLKSDL
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MKELERQRQTLAPFRGNPGIEQNALEAVLGEMEQTLAGLTQMQGKTGQHLADNEWLASIR
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
SRAIIPGGTCKFDLPSYYAWQQTHPDQRRQDIAKWIMPLLPLRDAAAIVLRLARESGQAS
HCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHH
KVMAMQGSYQQMLSGRTYQLMQVRVAPELRVIPEASANKYMLWVRFTVQDGDLRPRAVDV
HHHHHCCCHHHHHCCCCEEEEEEEECCCEEECCCCCCCEEEEEEEEEEECCCCCCEEEEE
DVPFQLTLCSL
CCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA