Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is yhgN [C]

Identifier: 186477393

GI number: 186477393

Start: 2985631

End: 2986236

Strand: Reverse

Name: yhgN [C]

Synonym: Bphy_2645

Alternate gene names: 186477393

Gene position: 2986236-2985631 (Counterclockwise)

Preceding gene: 186477394

Following gene: 186477390

Centisome position: 85.83

GC content: 61.06

Gene sequence:

>606_bases
GTGGAGTACAACTTCCTGTCCGCGACCATCCTGCTGATTCTCATCACTGATCCACTCGGCAACATCCCGCTCTTCATCAA
TTGCCTGCGGGGTGTTGCGCCTCACCGGCGCATTCGTGTAATTCTGCGCGAAGTCGCCATCGCGTTCGTGATTCTGCTGA
TCTTCATGCTCGTCGGCGACCGCTTTCTGCGGATGATGAGTCTGACCGATCTGTCATTGCGTATCGGCGGCGGGATCGTG
CTGTTCCTGATCGCGCTGCGGATGATCTTTCCGCATCCCGACGGCCCTTTCGGCGCCGACACGCGCGCCGCCGAACCGTT
GATTGTGCCGCTCGCGATTCCAGCGCTCGCCGGTCCGTCTGCGCTGGCCACGGTGATGCTGCTGACGTCGCAGGCACCGA
ACAAGATGCTCGAATGGGTTGCGGCGCTGACGGTGACGATGATCGTGTGCGCGCTCGTGCTGGTGATGGCGGAGCGCATC
CAGCAATGGCTCGGCGAGCGCACGGTGATGGCGTTCGAGCGTTTGATGGGTCTCGTGCTCGTCGCGATTTCGGTGGAGAT
GATGCTCGGCGGGATTCGCACTTTCGTGCATCAGCTCGAAAAGTGA

Upstream 100 bases:

>100_bases
CCGCCGCGATGCGGAAGCCACGCTGTTGCCCGTCGAAGCGGCGGCACAGGCAGTGATCGACAAGATCCACGCAGCGCTCG
CGCGCTGATGGGAGCGGACG

Downstream 100 bases:

>100_bases
AGCATGGCCATCCGGCCAACAAAAAAGCGACCCGCAGGTCGCTTTTTTATTTTGCAGCGCTGTAGCGCTGCCAGAAACTG
CATCACGCGCCTTCCGTCAG

Product: multiple antibiotic resistance (MarC)-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MEYNFLSATILLILITDPLGNIPLFINCLRGVAPHRRIRVILREVAIAFVILLIFMLVGDRFLRMMSLTDLSLRIGGGIV
LFLIALRMIFPHPDGPFGADTRAAEPLIVPLAIPALAGPSALATVMLLTSQAPNKMLEWVAALTVTMIVCALVLVMAERI
QQWLGERTVMAFERLMGLVLVAISVEMMLGGIRTFVHQLEK

Sequences:

>Translated_201_residues
MEYNFLSATILLILITDPLGNIPLFINCLRGVAPHRRIRVILREVAIAFVILLIFMLVGDRFLRMMSLTDLSLRIGGGIV
LFLIALRMIFPHPDGPFGADTRAAEPLIVPLAIPALAGPSALATVMLLTSQAPNKMLEWVAALTVTMIVCALVLVMAERI
QQWLGERTVMAFERLMGLVLVAISVEMMLGGIRTFVHQLEK
>Mature_201_residues
MEYNFLSATILLILITDPLGNIPLFINCLRGVAPHRRIRVILREVAIAFVILLIFMLVGDRFLRMMSLTDLSLRIGGGIV
LFLIALRMIFPHPDGPFGADTRAAEPLIVPLAIPALAGPSALATVMLLTSQAPNKMLEWVAALTVTMIVCALVLVMAERI
QQWLGERTVMAFERLMGLVLVAISVEMMLGGIRTFVHQLEK

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1789842, Length=192, Percent_Identity=44.7916666666667, Blast_Score=159, Evalue=1e-40,
Organism=Escherichia coli, GI1787494, Length=194, Percent_Identity=26.2886597938144, Blast_Score=67, Evalue=6e-13,
Organism=Escherichia coli, GI1787809, Length=194, Percent_Identity=26.2886597938144, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 22159; Mature: 22159

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYNFLSATILLILITDPLGNIPLFINCLRGVAPHRRIRVILREVAIAFVILLIFMLVGD
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFLRMMSLTDLSLRIGGGIVLFLIALRMIFPHPDGPFGADTRAAEPLIVPLAIPALAGPS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHCCHH
ALATVMLLTSQAPNKMLEWVAALTVTMIVCALVLVMAERIQQWLGERTVMAFERLMGLVL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAISVEMMLGGIRTFVHQLEK
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEYNFLSATILLILITDPLGNIPLFINCLRGVAPHRRIRVILREVAIAFVILLIFMLVGD
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFLRMMSLTDLSLRIGGGIVLFLIALRMIFPHPDGPFGADTRAAEPLIVPLAIPALAGPS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHCCHH
ALATVMLLTSQAPNKMLEWVAALTVTMIVCALVLVMAERIQQWLGERTVMAFERLMGLVL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAISVEMMLGGIRTFVHQLEK
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]