| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yhgN [C]
Identifier: 186477393
GI number: 186477393
Start: 2985631
End: 2986236
Strand: Reverse
Name: yhgN [C]
Synonym: Bphy_2645
Alternate gene names: 186477393
Gene position: 2986236-2985631 (Counterclockwise)
Preceding gene: 186477394
Following gene: 186477390
Centisome position: 85.83
GC content: 61.06
Gene sequence:
>606_bases GTGGAGTACAACTTCCTGTCCGCGACCATCCTGCTGATTCTCATCACTGATCCACTCGGCAACATCCCGCTCTTCATCAA TTGCCTGCGGGGTGTTGCGCCTCACCGGCGCATTCGTGTAATTCTGCGCGAAGTCGCCATCGCGTTCGTGATTCTGCTGA TCTTCATGCTCGTCGGCGACCGCTTTCTGCGGATGATGAGTCTGACCGATCTGTCATTGCGTATCGGCGGCGGGATCGTG CTGTTCCTGATCGCGCTGCGGATGATCTTTCCGCATCCCGACGGCCCTTTCGGCGCCGACACGCGCGCCGCCGAACCGTT GATTGTGCCGCTCGCGATTCCAGCGCTCGCCGGTCCGTCTGCGCTGGCCACGGTGATGCTGCTGACGTCGCAGGCACCGA ACAAGATGCTCGAATGGGTTGCGGCGCTGACGGTGACGATGATCGTGTGCGCGCTCGTGCTGGTGATGGCGGAGCGCATC CAGCAATGGCTCGGCGAGCGCACGGTGATGGCGTTCGAGCGTTTGATGGGTCTCGTGCTCGTCGCGATTTCGGTGGAGAT GATGCTCGGCGGGATTCGCACTTTCGTGCATCAGCTCGAAAAGTGA
Upstream 100 bases:
>100_bases CCGCCGCGATGCGGAAGCCACGCTGTTGCCCGTCGAAGCGGCGGCACAGGCAGTGATCGACAAGATCCACGCAGCGCTCG CGCGCTGATGGGAGCGGACG
Downstream 100 bases:
>100_bases AGCATGGCCATCCGGCCAACAAAAAAGCGACCCGCAGGTCGCTTTTTTATTTTGCAGCGCTGTAGCGCTGCCAGAAACTG CATCACGCGCCTTCCGTCAG
Product: multiple antibiotic resistance (MarC)-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MEYNFLSATILLILITDPLGNIPLFINCLRGVAPHRRIRVILREVAIAFVILLIFMLVGDRFLRMMSLTDLSLRIGGGIV LFLIALRMIFPHPDGPFGADTRAAEPLIVPLAIPALAGPSALATVMLLTSQAPNKMLEWVAALTVTMIVCALVLVMAERI QQWLGERTVMAFERLMGLVLVAISVEMMLGGIRTFVHQLEK
Sequences:
>Translated_201_residues MEYNFLSATILLILITDPLGNIPLFINCLRGVAPHRRIRVILREVAIAFVILLIFMLVGDRFLRMMSLTDLSLRIGGGIV LFLIALRMIFPHPDGPFGADTRAAEPLIVPLAIPALAGPSALATVMLLTSQAPNKMLEWVAALTVTMIVCALVLVMAERI QQWLGERTVMAFERLMGLVLVAISVEMMLGGIRTFVHQLEK >Mature_201_residues MEYNFLSATILLILITDPLGNIPLFINCLRGVAPHRRIRVILREVAIAFVILLIFMLVGDRFLRMMSLTDLSLRIGGGIV LFLIALRMIFPHPDGPFGADTRAAEPLIVPLAIPALAGPSALATVMLLTSQAPNKMLEWVAALTVTMIVCALVLVMAERI QQWLGERTVMAFERLMGLVLVAISVEMMLGGIRTFVHQLEK
Specific function: Unknown
COG id: COG2095
COG function: function code U; Multiple antibiotic transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0056 (marC) family [H]
Homologues:
Organism=Escherichia coli, GI1789842, Length=192, Percent_Identity=44.7916666666667, Blast_Score=159, Evalue=1e-40, Organism=Escherichia coli, GI1787494, Length=194, Percent_Identity=26.2886597938144, Blast_Score=67, Evalue=6e-13, Organism=Escherichia coli, GI1787809, Length=194, Percent_Identity=26.2886597938144, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002771 [H]
Pfam domain/function: PF01914 MarC [H]
EC number: NA
Molecular weight: Translated: 22159; Mature: 22159
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYNFLSATILLILITDPLGNIPLFINCLRGVAPHRRIRVILREVAIAFVILLIFMLVGD CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RFLRMMSLTDLSLRIGGGIVLFLIALRMIFPHPDGPFGADTRAAEPLIVPLAIPALAGPS HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHCCHH ALATVMLLTSQAPNKMLEWVAALTVTMIVCALVLVMAERIQQWLGERTVMAFERLMGLVL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAISVEMMLGGIRTFVHQLEK HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEYNFLSATILLILITDPLGNIPLFINCLRGVAPHRRIRVILREVAIAFVILLIFMLVGD CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RFLRMMSLTDLSLRIGGGIVLFLIALRMIFPHPDGPFGADTRAAEPLIVPLAIPALAGPS HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHCCHH ALATVMLLTSQAPNKMLEWVAALTVTMIVCALVLVMAERIQQWLGERTVMAFERLMGLVL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAISVEMMLGGIRTFVHQLEK HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12522265 [H]