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The map label for this gene is ypjD [C]

Identifier: 186477390

GI number: 186477390

Start: 2982450

End: 2983394

Strand: Reverse

Name: ypjD [C]

Synonym: Bphy_2642

Alternate gene names: 186477390

Gene position: 2983394-2982450 (Counterclockwise)

Preceding gene: 186477393

Following gene: 186477389

Centisome position: 85.75

GC content: 66.24

Gene sequence:

>945_bases
ATGGATATTGTACTGTATGCCCTCACTGCGCTCCTGTACGGCGGACTTGCCGTCGCGGGCTGGCGCGCGCACCGCCAGGC
GGCGACCGCGCCGATGCTCGAAAGCGTACCGCCGCTTTCCGCCGCTGCGCCGTTGCCTGCGGGCGGGCGAGGGCTGGCGG
GTGCGTCCGCCGGCATGTCGATGACGACGCGCGTCGTACTGTTCGCCGCGCTGCTCGCACACGGCGTGCTGCTTCATACC
ACGATCTTTCCGCACGACGCGATGGTGTTCGGCTTCGCGTTTGCGCTGTCCGCGATGTTCTGGCTGGGTGCTGGCATCTA
CTGGATCGAGAGTTTCTTTTTTCCGCTCGACGGCTTGCGTCTGCTCGTGCTGCCGCTCGCGTGCATCGCGTCGCTGCTGC
CGCTCCTGTTCAACGGCGTGCATGTGCTGCCGTATGCCGCCGACCCGCTGTTCAAGCTGCACTTCCTGATCGCCAACATT
GCGTATGGTCTGTTTGTGATCGCCGCGCTGCATGCCGTGCTGATGCTGCTCGTCGAACGGCGCCTGCATGCGATGCGCGG
CGGCGGCGCGCTCGCGCGCCAAAGCGCCGCGGCGGGCAACGGCTGGCTGTCGAGCGGGCTCGACACGCTGCCGCCTTTGC
TCACGCTGGAGACGCTGCTGTTTCGCCTGATCGGCGCCGGCTTCGTGCTGCTCACGCTCACCCTGGTGTCGGGCATCCTG
TTCAACGAACAGCTTCTCGACCGCGCGCTGCAACTCGATCACAAGACTGTGTTCGCGCTGCTGTCGTGGGTCATGTTCGG
TGCGCTGCTGACGGCGCGCAAGGTGTCGGGCTGGCGTGGGCGCGCGGCGTTGCGCTGGGTGCTCGCGTCGTTCGTCGCGC
TGCTGCTTGCGTATGTCGGCAGCCGCTTTGTTTTCGAGGTGCTGTTGCACCGTCCTGTTGTCTGA

Upstream 100 bases:

>100_bases
TGAGTGAGGTTGTCGAGCATGGGGGGCGGTGAGCAGTGCGGCCATTCCCGTCACAGCGCGAGAGCGGCGGACTTTGGAGG
GCCTGGTGTAAACTTCCAAT

Downstream 100 bases:

>100_bases
GTGTCATGCGACAAATTTTCCTGCTCATCCTGTTGTTCATCGTCGGCCAATGGCTCGTGAAGGCGCTGCGCCGCGCCGAG
GCATCGCGTACGGCGCGCAC

Product: cytochrome c assembly protein

Products: NA

Alternate protein names: Cytochrome C Assembly Family Protein; Transmembrane Protein; Metal Dependent Phosphohydrolase; ABC Transporter Permease; ABC-Type Transport System Permease Component-Like Protein; CcsA-Related Protein; Cytochrome Assembly Protein; ABC-Type Transport System Permease Component; Cytochrome C Assembly Transmembrane Protein

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MDIVLYALTALLYGGLAVAGWRAHRQAATAPMLESVPPLSAAAPLPAGGRGLAGASAGMSMTTRVVLFAALLAHGVLLHT
TIFPHDAMVFGFAFALSAMFWLGAGIYWIESFFFPLDGLRLLVLPLACIASLLPLLFNGVHVLPYAADPLFKLHFLIANI
AYGLFVIAALHAVLMLLVERRLHAMRGGGALARQSAAAGNGWLSSGLDTLPPLLTLETLLFRLIGAGFVLLTLTLVSGIL
FNEQLLDRALQLDHKTVFALLSWVMFGALLTARKVSGWRGRAALRWVLASFVALLLAYVGSRFVFEVLLHRPVV

Sequences:

>Translated_314_residues
MDIVLYALTALLYGGLAVAGWRAHRQAATAPMLESVPPLSAAAPLPAGGRGLAGASAGMSMTTRVVLFAALLAHGVLLHT
TIFPHDAMVFGFAFALSAMFWLGAGIYWIESFFFPLDGLRLLVLPLACIASLLPLLFNGVHVLPYAADPLFKLHFLIANI
AYGLFVIAALHAVLMLLVERRLHAMRGGGALARQSAAAGNGWLSSGLDTLPPLLTLETLLFRLIGAGFVLLTLTLVSGIL
FNEQLLDRALQLDHKTVFALLSWVMFGALLTARKVSGWRGRAALRWVLASFVALLLAYVGSRFVFEVLLHRPVV
>Mature_314_residues
MDIVLYALTALLYGGLAVAGWRAHRQAATAPMLESVPPLSAAAPLPAGGRGLAGASAGMSMTTRVVLFAALLAHGVLLHT
TIFPHDAMVFGFAFALSAMFWLGAGIYWIESFFFPLDGLRLLVLPLACIASLLPLLFNGVHVLPYAADPLFKLHFLIANI
AYGLFVIAALHAVLMLLVERRLHAMRGGGALARQSAAAGNGWLSSGLDTLPPLLTLETLLFRLIGAGFVLLTLTLVSGIL
FNEQLLDRALQLDHKTVFALLSWVMFGALLTARKVSGWRGRAALRWVLASFVALLLAYVGSRFVFEVLLHRPVV

Specific function: Unknown

COG id: COG4137

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33704; Mature: 33704

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA