| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is gntK [H]
Identifier: 186477325
GI number: 186477325
Start: 2898078
End: 2898572
Strand: Reverse
Name: gntK [H]
Synonym: Bphy_2577
Alternate gene names: 186477325
Gene position: 2898572-2898078 (Counterclockwise)
Preceding gene: 186477326
Following gene: 186477323
Centisome position: 83.31
GC content: 59.39
Gene sequence:
>495_bases ATGATTTTGATCGCGATGGGCGTATCGGGCGCCGGCAAGACCCGGATTGGGGAATTGCTGGCTGAGCGGCTCAAGTGCAG TTTCACCGACGGCGACGCGTTTCACAGCGCCGCCAACAAGGAGAAGATGCACAACGGCATTCCGTTGACGGATGAAGACC GCTGGCCGTGGCTCAGAACGATCCGTGCGGCGATCGAAGAGAAGCAGCGGGCGGGCGAGACGGCGGTGTTCACGTGCTCG TCGTTGAAGCGCTCGTACCGCGATATCTTGCGGGACGGAGATCGCGATGTGTGTTTTGTTTACCTGAAGGGCACGCGGGA GTTGTTGCAGGAGCGACTGCAGACGCGGACCGGGCATTTCTTCGACCCGTCGTTGTTGCAGAGTCAGCTCGATACGCTGG AAGAGCCAGGCGAGGATGAGGCGATTACGGTGAGTATCGAGCTGACGCCCGAAGAAATCGTGGATAAGACGCTGGCTATG GTGAAAGCGCGTTAG
Upstream 100 bases:
>100_bases GGGCAGACGTTTCAGACGTGGTCGCTCTGCGAAACCATCATTTCGCTGATGGGTCTGGGTTTGACCTTCGCGTTGGCGGC GGTCCTGTAAGGAGTTTCAA
Downstream 100 bases:
>100_bases CGTTTTACGTGGTCTGCTGCTTGTTGCGGGCCTCGGGGTCTTGTCCTGATTCGCCAGCGTTGCCCCGCAGAGGAGCAACG CCAGCGAACCAGAAGCAAAA
Product: carbohydrate kinase
Products: NA
Alternate protein names: Gluconate kinase 2 [H]
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MILIAMGVSGAGKTRIGELLAERLKCSFTDGDAFHSAANKEKMHNGIPLTDEDRWPWLRTIRAAIEEKQRAGETAVFTCS SLKRSYRDILRDGDRDVCFVYLKGTRELLQERLQTRTGHFFDPSLLQSQLDTLEEPGEDEAITVSIELTPEEIVDKTLAM VKAR
Sequences:
>Translated_164_residues MILIAMGVSGAGKTRIGELLAERLKCSFTDGDAFHSAANKEKMHNGIPLTDEDRWPWLRTIRAAIEEKQRAGETAVFTCS SLKRSYRDILRDGDRDVCFVYLKGTRELLQERLQTRTGHFFDPSLLQSQLDTLEEPGEDEAITVSIELTPEEIVDKTLAM VKAR >Mature_164_residues MILIAMGVSGAGKTRIGELLAERLKCSFTDGDAFHSAANKEKMHNGIPLTDEDRWPWLRTIRAAIEEKQRAGETAVFTCS SLKRSYRDILRDGDRDVCFVYLKGTRELLQERLQTRTGHFFDPSLLQSQLDTLEEPGEDEAITVSIELTPEEIVDKTLAM VKAR
Specific function: Gluconate utilization system GNT-I. [C]
COG id: COG3265
COG function: function code G; Gluconate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gluconokinase gntK/gntV family [H]
Homologues:
Organism=Homo sapiens, GI299758445, Length=181, Percent_Identity=38.121546961326, Blast_Score=127, Evalue=3e-30, Organism=Escherichia coli, GI87082265, Length=163, Percent_Identity=41.7177914110429, Blast_Score=147, Evalue=3e-37, Organism=Escherichia coli, GI1790719, Length=147, Percent_Identity=47.6190476190476, Blast_Score=138, Evalue=2e-34, Organism=Caenorhabditis elegans, GI25146487, Length=167, Percent_Identity=44.9101796407186, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6320454, Length=146, Percent_Identity=37.6712328767123, Blast_Score=101, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR006001 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 18499; Mature: 18499
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILIAMGVSGAGKTRIGELLAERLKCSFTDGDAFHSAANKEKMHNGIPLTDEDRWPWLRT CEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHH IRAAIEEKQRAGETAVFTCSSLKRSYRDILRDGDRDVCFVYLKGTRELLQERLQTRTGHF HHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCC FDPSLLQSQLDTLEEPGEDEAITVSIELTPEEIVDKTLAMVKAR CCHHHHHHHHHHHCCCCCCCEEEEEEEECHHHHHHHHHHHHCCC >Mature Secondary Structure MILIAMGVSGAGKTRIGELLAERLKCSFTDGDAFHSAANKEKMHNGIPLTDEDRWPWLRT CEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHH IRAAIEEKQRAGETAVFTCSSLKRSYRDILRDGDRDVCFVYLKGTRELLQERLQTRTGHF HHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCC FDPSLLQSQLDTLEEPGEDEAITVSIELTPEEIVDKTLAMVKAR CCHHHHHHHHHHHCCCCCCCEEEEEEEECHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9135111; 9278503; 8655507; 11468405 [H]