| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477239
Identifier: 186477239
GI number: 186477239
Start: 2800713
End: 2801399
Strand: Direct
Name: 186477239
Synonym: Bphy_2490
Alternate gene names: NA
Gene position: 2800713-2801399 (Clockwise)
Preceding gene: 186477238
Following gene: 186477240
Centisome position: 80.5
GC content: 59.53
Gene sequence:
>687_bases ATGGCTAATCTCGCTCTCTTCGACCTCGATCACACGCTCATCCCCACCGACAGCGACCACGAATGGGGCCGCTTCATGGT GAAACTCGGCATTGTCGAAGCCGAAAGTTTCACGCGTGAAAACGATCGCTTCTTTGCCGACTACAAGGCCGGCAAGCTCG ACATTCATGCCTATCTGGTCGCGATGCTCACGCCGCTGGCGAAATACCCGCGCTCGCAGCTGAAAACGTGGCACGACCAG TACATGCACGAAGTCATCAAGCCGGCCATCGTGCCCGCGGCGATGGAGCTCGTGCAGAAGCACCTCGACGCAGGCGACCT GTGCTGCATGGTCACCGCGACCAACGAGTTCATCACCGCGCCCATCGCCGAAGTATTCGGCATCGACAAGCTGATCGCGT GTGAAGTGGAGACGATCGACGGGCATCCGGCATCGGACTACACGGGTTTCCCGAAAGGCACGCCGAGCTACCGGGAAGGC AAGATCGCGCGCACGGAAGAATGGCTCGCGTCGCTTGGCAAAACATGGTCCGACTTCGAGCGCAGTTATTTCTACAGCGA TTCGCATAACGACATCCCGCTGCTCGAAAAGGTCACCGACCCGATCGCGACCAACCCCGACGACACGCTGCGCGCTCACG CACAGAAGCAAGGCTGGCGCATCCTCGAACTCTTTCAACCCACGTGA
Upstream 100 bases:
>100_bases ACGATGCTCGCCTCGCCCGACAATGCGGGCAGCAGCGCTGACGGCCCGCGACGTGCGGCGCTACAAGCCTCATCATCCGC TTCAAGTAAAATAGTCCCTC
Downstream 100 bases:
>100_bases TCAAGAAACTCATTCGCAAGCTGTTCGGACAGGACGCGGAGCCCGCTGACGAGGCCGCGCCTTCCACGGAATCCGACGAC TCCTCGTTCGACGAGCGCCC
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MANLALFDLDHTLIPTDSDHEWGRFMVKLGIVEAESFTRENDRFFADYKAGKLDIHAYLVAMLTPLAKYPRSQLKTWHDQ YMHEVIKPAIVPAAMELVQKHLDAGDLCCMVTATNEFITAPIAEVFGIDKLIACEVETIDGHPASDYTGFPKGTPSYREG KIARTEEWLASLGKTWSDFERSYFYSDSHNDIPLLEKVTDPIATNPDDTLRAHAQKQGWRILELFQPT
Sequences:
>Translated_228_residues MANLALFDLDHTLIPTDSDHEWGRFMVKLGIVEAESFTRENDRFFADYKAGKLDIHAYLVAMLTPLAKYPRSQLKTWHDQ YMHEVIKPAIVPAAMELVQKHLDAGDLCCMVTATNEFITAPIAEVFGIDKLIACEVETIDGHPASDYTGFPKGTPSYREG KIARTEEWLASLGKTWSDFERSYFYSDSHNDIPLLEKVTDPIATNPDDTLRAHAQKQGWRILELFQPT >Mature_227_residues ANLALFDLDHTLIPTDSDHEWGRFMVKLGIVEAESFTRENDRFFADYKAGKLDIHAYLVAMLTPLAKYPRSQLKTWHDQY MHEVIKPAIVPAAMELVQKHLDAGDLCCMVTATNEFITAPIAEVFGIDKLIACEVETIDGHPASDYTGFPKGTPSYREGK IARTEEWLASLGKTWSDFERSYFYSDSHNDIPLLEKVTDPIATNPDDTLRAHAQKQGWRILELFQPT
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25864; Mature: 25732
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLALFDLDHTLIPTDSDHEWGRFMVKLGIVEAESFTRENDRFFADYKAGKLDIHAYLV CCCEEEEECCCEECCCCCCCHHHHEEHHHEEEHHHHHCCCCCCEEEECCCCCHHHHHHHH AMLTPLAKYPRSQLKTWHDQYMHEVIKPAIVPAAMELVQKHLDAGDLCCMVTATNEFITA HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHH PIAEVFGIDKLIACEVETIDGHPASDYTGFPKGTPSYREGKIARTEEWLASLGKTWSDFE HHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHH RSYFYSDSHNDIPLLEKVTDPIATNPDDTLRAHAQKQGWRILELFQPT HHHEECCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEECCC >Mature Secondary Structure ANLALFDLDHTLIPTDSDHEWGRFMVKLGIVEAESFTRENDRFFADYKAGKLDIHAYLV CCEEEEECCCEECCCCCCCHHHHEEHHHEEEHHHHHCCCCCCEEEECCCCCHHHHHHHH AMLTPLAKYPRSQLKTWHDQYMHEVIKPAIVPAAMELVQKHLDAGDLCCMVTATNEFITA HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHH PIAEVFGIDKLIACEVETIDGHPASDYTGFPKGTPSYREGKIARTEEWLASLGKTWSDFE HHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHH RSYFYSDSHNDIPLLEKVTDPIATNPDDTLRAHAQKQGWRILELFQPT HHHEECCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA