| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is ywtG [H]
Identifier: 186477230
GI number: 186477230
Start: 2789759
End: 2791249
Strand: Direct
Name: ywtG [H]
Synonym: Bphy_2481
Alternate gene names: 186477230
Gene position: 2789759-2791249 (Clockwise)
Preceding gene: 186477229
Following gene: 186477231
Centisome position: 80.18
GC content: 66.93
Gene sequence:
>1491_bases ATGTCCACTCTTCTCGCGCCCGAAGCAGGCGTCGCGCAGGCATCGTCCCGCGCCGATAACAAGCCCGTCATCCGCTCCGC CGCCGACGTCTCGGCACTCGTCAACCAGGGCGCCGCCGTCGGCAGCGACGCGCGCATCGTCGTCGCGATCGCACTGGGCG GCGTCTTCCTCGATGCCTACGATCTCGGCGCGCTCGCGTTCGGCCTCAAGGACGTGGCGCGCGAATTCTCGCTGACGCCC GCCGGCACGGGCTTCGTCGCTTCGGCGATCACGTTCGGCGCGATCGTCGGCGCGTGTCTCGGCGGTTTTCTGACCGATCG CCTCGGCCGCTATCGCGTGTTCATGGCCGACATGTTCTTCTTCGTGATCGCCGCGCTCGCCTGCGCGTTCGCGCCGAACG CCTGGGTGCTCGGCGGCGCACGCTTCGTGATGGGACTGGGCGTCGGCATCGACCTGCCTGTCGCGATGGCGTTTCTCGCC GAGTTCTCGCGCCTGCAGGGCAAGGGCAACAAGGCCGCTCGCGTGGCGATGTGGTGTCCCGTCTGGTACGCGGCCATCAG CGTGTCGTATCTGCTGGTGCTCGCGTTCTACGCGACGCTGCCGGAAACCCACCAGCCTCTGCTATGGCGTCTGATTCTCG GCTTTGGCGCCGTGCCCGCCATCGTCATCATCGCGATCCGCAGCCGCTATATCAGCGAATCGCCTGTCTGGGCCGCGAAT CAGGGCGATCTTACGGGCGCTGCGCAGATCCTGAGGCGCTCATATGGTATCGACGCCGACGTCGCGCCGGATGCCGCCGC TGCCGCACAACGCAGCCACGTGCGTACGGCATCGTGGAAAAACTACGGCACGCTGCTCAAGGGCGTCTATCTGAAGCGCA CGGTGCTCGCGACGGTGATCGCAATCGCTTCGTCGTTCGCCTATAACGCGGTCGCGTTCGGTCTGCCCGTCATCATTTCC AGCTTCCTCGCGCAGTCGATGCTCACGACGATCCTCGCATCGCTCGTGCTCAATCTCGCGTTCGCATTCGTGGGCGGCAT TATCGCGGTGCGCACGGTGCCGAAGGTCGGCGCCTGGAAGCTGACGGTGCTCGGCTACGCTTGCCAGCTCGTCGCGCTGG TGGGCCTTGCCGTCGTCGGCAAACCGGCGGGCGGCGCGCAGGTCGCCGTCGCGATCGCAATGCTCGCGCTGTTCCTGTTC GGCCAGGGTTTCGGGCCGGGCTCGCATAGCATGACGTTCGCGTCGCTGAGCTATCCGACTTCGCTGCGCGGCGTCGGTGT CGGCTTCAACCAGACGCTGATGCGCGCCAGTTCCACGGTTTCGCTGTTCCTCTTCCCCGTGCTCGCGGCCGCGCTGCATA CGCGCGTGTTCTGGATCATCGCGGCCGCGCCGCTGTGCGGCCTCGTCGCGCTGCTGGCAATCCGCTGGGAGCCGTCGGGT TACGACGTCGACGCCGAAGACTTCGCACCCGCCGCGGCAGCTAGACCGTAA
Upstream 100 bases:
>100_bases ATGACGGCGAGCATGAGCTAATAACAAAAATAACGTTGATTGCGGCAACTGGGCGCCAGTACGATCCGCCCTTTTGCGCG TTTTTGCGCGCACACGCCGC
Downstream 100 bases:
>100_bases AGGCCTCGCTCCGGCGAGACGTCCGCTGACGTCGTTGTGACATCGGGGGTCTCCGGGCAACGGGAGACCCTCTTTTGCAT TTTGGCGCGCCGCGCGGCGT
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MSTLLAPEAGVAQASSRADNKPVIRSAADVSALVNQGAAVGSDARIVVAIALGGVFLDAYDLGALAFGLKDVAREFSLTP AGTGFVASAITFGAIVGACLGGFLTDRLGRYRVFMADMFFFVIAALACAFAPNAWVLGGARFVMGLGVGIDLPVAMAFLA EFSRLQGKGNKAARVAMWCPVWYAAISVSYLLVLAFYATLPETHQPLLWRLILGFGAVPAIVIIAIRSRYISESPVWAAN QGDLTGAAQILRRSYGIDADVAPDAAAAAQRSHVRTASWKNYGTLLKGVYLKRTVLATVIAIASSFAYNAVAFGLPVIIS SFLAQSMLTTILASLVLNLAFAFVGGIIAVRTVPKVGAWKLTVLGYACQLVALVGLAVVGKPAGGAQVAVAIAMLALFLF GQGFGPGSHSMTFASLSYPTSLRGVGVGFNQTLMRASSTVSLFLFPVLAAALHTRVFWIIAAAPLCGLVALLAIRWEPSG YDVDAEDFAPAAAARP
Sequences:
>Translated_496_residues MSTLLAPEAGVAQASSRADNKPVIRSAADVSALVNQGAAVGSDARIVVAIALGGVFLDAYDLGALAFGLKDVAREFSLTP AGTGFVASAITFGAIVGACLGGFLTDRLGRYRVFMADMFFFVIAALACAFAPNAWVLGGARFVMGLGVGIDLPVAMAFLA EFSRLQGKGNKAARVAMWCPVWYAAISVSYLLVLAFYATLPETHQPLLWRLILGFGAVPAIVIIAIRSRYISESPVWAAN QGDLTGAAQILRRSYGIDADVAPDAAAAAQRSHVRTASWKNYGTLLKGVYLKRTVLATVIAIASSFAYNAVAFGLPVIIS SFLAQSMLTTILASLVLNLAFAFVGGIIAVRTVPKVGAWKLTVLGYACQLVALVGLAVVGKPAGGAQVAVAIAMLALFLF GQGFGPGSHSMTFASLSYPTSLRGVGVGFNQTLMRASSTVSLFLFPVLAAALHTRVFWIIAAAPLCGLVALLAIRWEPSG YDVDAEDFAPAAAARP >Mature_495_residues STLLAPEAGVAQASSRADNKPVIRSAADVSALVNQGAAVGSDARIVVAIALGGVFLDAYDLGALAFGLKDVAREFSLTPA GTGFVASAITFGAIVGACLGGFLTDRLGRYRVFMADMFFFVIAALACAFAPNAWVLGGARFVMGLGVGIDLPVAMAFLAE FSRLQGKGNKAARVAMWCPVWYAAISVSYLLVLAFYATLPETHQPLLWRLILGFGAVPAIVIIAIRSRYISESPVWAANQ GDLTGAAQILRRSYGIDADVAPDAAAAAQRSHVRTASWKNYGTLLKGVYLKRTVLATVIAIASSFAYNAVAFGLPVIISS FLAQSMLTTILASLVLNLAFAFVGGIIAVRTVPKVGAWKLTVLGYACQLVALVGLAVVGKPAGGAQVAVAIAMLALFLFG QGFGPGSHSMTFASLSYPTSLRGVGVGFNQTLMRASSTVSLFLFPVLAAALHTRVFWIIAAAPLCGLVALLAIRWEPSGY DVDAEDFAPAAAARP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1788068, Length=239, Percent_Identity=29.7071129707113, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI87082159, Length=402, Percent_Identity=26.3681592039801, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1789207, Length=314, Percent_Identity=27.7070063694268, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1786229, Length=395, Percent_Identity=22.7848101265823, Blast_Score=82, Evalue=9e-17, Organism=Escherichia coli, GI1788074, Length=348, Percent_Identity=25.8620689655172, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1789312, Length=442, Percent_Identity=25.7918552036199, Blast_Score=73, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17565978, Length=341, Percent_Identity=25.8064516129032, Blast_Score=65, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6320705, Length=259, Percent_Identity=25.0965250965251, Blast_Score=70, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6324469, Length=454, Percent_Identity=21.8061674008811, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR003663 - InterPro: IPR005829 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 51635; Mature: 51504
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLLAPEAGVAQASSRADNKPVIRSAADVSALVNQGAAVGSDARIVVAIALGGVFLDAY CCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHH DLGALAFGLKDVAREFSLTPAGTGFVASAITFGAIVGACLGGFLTDRLGRYRVFMADMFF HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVIAALACAFAPNAWVLGGARFVMGLGVGIDLPVAMAFLAEFSRLQGKGNKAARVAMWCP HHHHHHHHHCCCCCEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEHHHH VWYAAISVSYLLVLAFYATLPETHQPLLWRLILGFGAVPAIVIIAIRSRYISESPVWAAN HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCC QGDLTGAAQILRRSYGIDADVAPDAAAAAQRSHVRTASWKNYGTLLKGVYLKRTVLATVI CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH AIASSFAYNAVAFGLPVIISSFLAQSMLTTILASLVLNLAFAFVGGIIAVRTVPKVGAWK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH LTVLGYACQLVALVGLAVVGKPAGGAQVAVAIAMLALFLFGQGFGPGSHSMTFASLSYPT HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC SLRGVGVGFNQTLMRASSTVSLFLFPVLAAALHTRVFWIIAAAPLCGLVALLAIRWEPSG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC YDVDAEDFAPAAAARP CCCCHHHCCCCCCCCC >Mature Secondary Structure STLLAPEAGVAQASSRADNKPVIRSAADVSALVNQGAAVGSDARIVVAIALGGVFLDAY CCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHH DLGALAFGLKDVAREFSLTPAGTGFVASAITFGAIVGACLGGFLTDRLGRYRVFMADMFF HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVIAALACAFAPNAWVLGGARFVMGLGVGIDLPVAMAFLAEFSRLQGKGNKAARVAMWCP HHHHHHHHHCCCCCEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEHHHH VWYAAISVSYLLVLAFYATLPETHQPLLWRLILGFGAVPAIVIIAIRSRYISESPVWAAN HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCC QGDLTGAAQILRRSYGIDADVAPDAAAAAQRSHVRTASWKNYGTLLKGVYLKRTVLATVI CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH AIASSFAYNAVAFGLPVIISSFLAQSMLTTILASLVLNLAFAFVGGIIAVRTVPKVGAWK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH LTVLGYACQLVALVGLAVVGKPAGGAQVAVAIAMLALFLFGQGFGPGSHSMTFASLSYPT HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC SLRGVGVGFNQTLMRASSTVSLFLFPVLAAALHTRVFWIIAAAPLCGLVALLAIRWEPSG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC YDVDAEDFAPAAAARP CCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]