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The map label for this gene is lumQ [H]

Identifier: 186477229

GI number: 186477229

Start: 2788554

End: 2789618

Strand: Direct

Name: lumQ [H]

Synonym: Bphy_2480

Alternate gene names: 186477229

Gene position: 2788554-2789618 (Clockwise)

Preceding gene: 186477227

Following gene: 186477230

Centisome position: 80.15

GC content: 65.54

Gene sequence:

>1065_bases
ATGCGATATGAGCACGCGGTGAGTCGGTGGATGGATTCAACCTCGTCGAGCGCAGTCGTCAACCTCGGGCACATGGTCAA
ACGCATCGGTATTCTCGTTTTTGAACGATTTCCGCTTAGCGACGTTTGCCTGCTCGCTGACGCATTCCGACTCGCCAACG
AAGCACAAGCCGACCAGGCCGGCGGCGAGGGTTCGGGTGTCGAACCCTCCTACTCGATCGTCATGCTGTCCGAAATGGGC
GGCAGCGTCGTCAGCAGCTGTTCGCTGCGCGTGTGGACGGAGAGCCTCAATGGACCGCTGCTGAACGGCTTCGACACGCT
GTTCATCGTCGGCGGTCCGGGTGCGTCGCGCGCCAAAGCGAACGAGCGGCTGATCCGCCGGCTGCGCGCAATCGCGCCGA
AAATACGCGTCGTCAAGGCGCTCGACGAAGGACTCGGCGTGCTGGCCGCCGCGGATATCGCCTTCGAACGGCGCGGCTGG
CGCAGCATGCCGGGCGCAACCGACGCCGCGGGCAGGCCCGTCGCGCCCGTCGCCAACGAAACCCAATGGCAGATCGAGCC
AGGCGCCTCCATCGACGTCGACGCGCCCGTGCGTTCGATCGCGGCCGCGCTCACCGTGATCAAGCGCGATCACGGCACGC
CGATCGCGCGGATCGTGTCGGAGCGCGCACTGTCGGGCGCGTCGCGCCGGCTCGACGCGATCCTCGACGACGACGAGAAA
AAGGGCATCAGCCGCAAGATCACGACAGCCGCGCACTGGATTCGCGAGAACTACACGCGGCATATCTCGGTGGCGGAAGC
AGCCGCCGTCGCCAAGATGAGCGAGCGCAACTTCCTGCGGCGTTTCAAGGCGCAGGTCGGGCTCACGCCGTCGGAATATC
TGCTGCGCGCGCGGCTCGACGCGAGCTGTCTGCTGCTGGCGGAAACCGACATGTCGATCGACGGCATCGCGCGGCGTTGC
GGCGTGCGCAGCGGCGACGGACTCGCGAAAATCTTCCGCAAGCGCCTGTCCATTTCTCCTACCGACTATCGTGCGGCGCA
TCGGCACAGCGTTACCAAGAACTGA

Upstream 100 bases:

>100_bases
TTCAGACTCGGGTGATCAGCGCGCAAAGACGTAGGCCTATGATGGAGCCAAGGCACGCAGACCTTTATTCTTTCGCCGTC
CTCGGCACTGGAGACAGACG

Downstream 100 bases:

>100_bases
TCGCCCGAGCCTGTCTCTAACGAGCCGTCGTGCAGCCCGCATGACGGCGAGCATGAGCTAATAACAAAAATAACGTTGAT
TGCGGCAACTGGGCGCCAGT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MRYEHAVSRWMDSTSSSAVVNLGHMVKRIGILVFERFPLSDVCLLADAFRLANEAQADQAGGEGSGVEPSYSIVMLSEMG
GSVVSSCSLRVWTESLNGPLLNGFDTLFIVGGPGASRAKANERLIRRLRAIAPKIRVVKALDEGLGVLAAADIAFERRGW
RSMPGATDAAGRPVAPVANETQWQIEPGASIDVDAPVRSIAAALTVIKRDHGTPIARIVSERALSGASRRLDAILDDDEK
KGISRKITTAAHWIRENYTRHISVAEAAAVAKMSERNFLRRFKAQVGLTPSEYLLRARLDASCLLLAETDMSIDGIARRC
GVRSGDGLAKIFRKRLSISPTDYRAAHRHSVTKN

Sequences:

>Translated_354_residues
MRYEHAVSRWMDSTSSSAVVNLGHMVKRIGILVFERFPLSDVCLLADAFRLANEAQADQAGGEGSGVEPSYSIVMLSEMG
GSVVSSCSLRVWTESLNGPLLNGFDTLFIVGGPGASRAKANERLIRRLRAIAPKIRVVKALDEGLGVLAAADIAFERRGW
RSMPGATDAAGRPVAPVANETQWQIEPGASIDVDAPVRSIAAALTVIKRDHGTPIARIVSERALSGASRRLDAILDDDEK
KGISRKITTAAHWIRENYTRHISVAEAAAVAKMSERNFLRRFKAQVGLTPSEYLLRARLDASCLLLAETDMSIDGIARRC
GVRSGDGLAKIFRKRLSISPTDYRAAHRHSVTKN
>Mature_354_residues
MRYEHAVSRWMDSTSSSAVVNLGHMVKRIGILVFERFPLSDVCLLADAFRLANEAQADQAGGEGSGVEPSYSIVMLSEMG
GSVVSSCSLRVWTESLNGPLLNGFDTLFIVGGPGASRAKANERLIRRLRAIAPKIRVVKALDEGLGVLAAADIAFERRGW
RSMPGATDAAGRPVAPVANETQWQIEPGASIDVDAPVRSIAAALTVIKRDHGTPIARIVSERALSGASRRLDAILDDDEK
KGISRKITTAAHWIRENYTRHISVAEAAAVAKMSERNFLRRFKAQVGLTPSEYLLRARLDASCLLLAETDMSIDGIARRC
GVRSGDGLAKIFRKRLSISPTDYRAAHRHSVTKN

Specific function: Probable transcriptional regulator. Its target gene(s) is not yet known [H]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38413; Mature: 38413

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYEHAVSRWMDSTSSSAVVNLGHMVKRIGILVFERFPLSDVCLLADAFRLANEAQADQA
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
GGEGSGVEPSYSIVMLSEMGGSVVSSCSLRVWTESLNGPLLNGFDTLFIVGGPGASRAKA
CCCCCCCCCCEEEEEEHHCCCHHHHHCHHEEEHHHCCCCEECCCCEEEEEECCCCCHHHH
NERLIRRLRAIAPKIRVVKALDEGLGVLAAADIAFERRGWRSMPGATDAAGRPVAPVANE
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
TQWQIEPGASIDVDAPVRSIAAALTVIKRDHGTPIARIVSERALSGASRRLDAILDDDEK
CEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
KGISRKITTAAHWIRENYTRHISVAEAAAVAKMSERNFLRRFKAQVGLTPSEYLLRARLD
CCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
ASCLLLAETDMSIDGIARRCGVRSGDGLAKIFRKRLSISPTDYRAAHRHSVTKN
CEEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MRYEHAVSRWMDSTSSSAVVNLGHMVKRIGILVFERFPLSDVCLLADAFRLANEAQADQA
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
GGEGSGVEPSYSIVMLSEMGGSVVSSCSLRVWTESLNGPLLNGFDTLFIVGGPGASRAKA
CCCCCCCCCCEEEEEEHHCCCHHHHHCHHEEEHHHCCCCEECCCCEEEEEECCCCCHHHH
NERLIRRLRAIAPKIRVVKALDEGLGVLAAADIAFERRGWRSMPGATDAAGRPVAPVANE
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
TQWQIEPGASIDVDAPVRSIAAALTVIKRDHGTPIARIVSERALSGASRRLDAILDDDEK
CEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
KGISRKITTAAHWIRENYTRHISVAEAAAVAKMSERNFLRRFKAQVGLTPSEYLLRARLD
CCCHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
ASCLLLAETDMSIDGIARRCGVRSGDGLAKIFRKRLSISPTDYRAAHRHSVTKN
CEEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7503752 [H]