| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477207
Identifier: 186477207
GI number: 186477207
Start: 2757263
End: 2758330
Strand: Reverse
Name: 186477207
Synonym: Bphy_2458
Alternate gene names: NA
Gene position: 2758330-2757263 (Counterclockwise)
Preceding gene: 186477208
Following gene: 186477198
Centisome position: 79.28
GC content: 65.54
Gene sequence:
>1068_bases ATGCGGATACTTCATCTCGTGCTGGAGCCGAGGCTGTCGGGCGCGGAAGTGCTGGCGAAGGATCTCGCGATCCATCAGCA GCGCGAGGGCAGCGTGGTCGGCGTGACGGCGCTGTTGCCCGAGCGGCCCGACTTCACGCCCTTCACGCGCGAGCTGGCGA GCCACGGCGTCGAGTGTGTGTTTCCCGCGAGGCGCTCGAGGCTGCCTGGCAAGCTGATTCATCTCGCCGCCGTGCTGCGG CGCTTCCGGCCCGATGTGCTATTCGCGCACGCGACGATTCCCGCGTTTTACGCGCGCGCATTGCCGACCAACGTGCCCGT GATCTACGTGATGCACTCCGCGGTCAACGACTTCGAGCGCAAGCTGTTTCGCAACGTTGAGCGCCTGCTGTCGTCGCGGG CGCGGGCAGTGATCGGCGTGTCGCCCGCGAACGTGCGGGACTATAAGGACTGCGTCGGTTCGCATCCGCTCGTGACGTTG ATCCCGAATGGCGTCGACGTGTCGCGCTTCGCATTCGACGATCGCCCGCGTTCCGGCGATGCGTTGCCGCAGATCGTGCA GATCGGCCGGTATACGTCGGTGAAGAACCAGTTGCAGACGGTGCATGCGTTCAGCGAGGTGGCGGCGCAGGTGCAGGACG TGCGGCTGCAACTATACGGCGTGGTCGAGGACCCCGCTTATCTCGCGGCGATCGAGGATCTGGTGAAGAAGCTCGGCCTC GAAGACCGGGTGAGCGTCGATGGTCCCATTTCGGACGTGAGCGGGGTGCTACGCGGGTCGAATGCGTTCGCGATGCCGTC GCGCTCGGAAGGACACAGCATCGCGTTTCTCGAGGCGCTGGCGTCGGGGATTCCTGTTGTGGCGAGCACGATCACGCCGT TTCAGTTTGCAAAGACGCTGCCCGGCGTGCAACTGGTCGATACCGACGATACTTCCGCGTATGCTGCGGCGCTGTTGACC GCGCTCGCGCAGCCCAAGGCGCCGAGGTCGCTCGCAGGTCTGACGCTGCAGGATACGGCGCAGCGCTATCTGGCCGTTGC GCAGCAGGTGATCGGCGCGCGGGTGTGA
Upstream 100 bases:
>100_bases CGACGCACTACTGGGGCGTGACGGGGATCGCGTGGGGGATGACGGTCGGCCTGAGTTCGGCGGCTGCATGGATGATGTAC CGGGCCGCGAGGGCGCTGTG
Downstream 100 bases:
>100_bases AAGCGGGCCTGGACGTGTTGCACGCGGAGGCGGACGCGGCGAAGTGAGACGCGCCTTGAAGACTTCAACTCAGCGCGGAC CATCTCAGCGAGCTTTCTGC
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Glycosyl Transferase; Lipopolysaccharide Biosynthesis Protein; Group 1 Glycosyl Transferase; Lipopolysaccharide Core Biosynthesis Glycosyltransferase; Glycosyltransferase-Like Protein; Glycosyl Transferase Group 1 Protein; Glycosyl Transferase Family Protein; Glycogen Synthase; Glycosyltransferase Group 1 Family Protein
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MRILHLVLEPRLSGAEVLAKDLAIHQQREGSVVGVTALLPERPDFTPFTRELASHGVECVFPARRSRLPGKLIHLAAVLR RFRPDVLFAHATIPAFYARALPTNVPVIYVMHSAVNDFERKLFRNVERLLSSRARAVIGVSPANVRDYKDCVGSHPLVTL IPNGVDVSRFAFDDRPRSGDALPQIVQIGRYTSVKNQLQTVHAFSEVAAQVQDVRLQLYGVVEDPAYLAAIEDLVKKLGL EDRVSVDGPISDVSGVLRGSNAFAMPSRSEGHSIAFLEALASGIPVVASTITPFQFAKTLPGVQLVDTDDTSAYAAALLT ALAQPKAPRSLAGLTLQDTAQRYLAVAQQVIGARV
Sequences:
>Translated_355_residues MRILHLVLEPRLSGAEVLAKDLAIHQQREGSVVGVTALLPERPDFTPFTRELASHGVECVFPARRSRLPGKLIHLAAVLR RFRPDVLFAHATIPAFYARALPTNVPVIYVMHSAVNDFERKLFRNVERLLSSRARAVIGVSPANVRDYKDCVGSHPLVTL IPNGVDVSRFAFDDRPRSGDALPQIVQIGRYTSVKNQLQTVHAFSEVAAQVQDVRLQLYGVVEDPAYLAAIEDLVKKLGL EDRVSVDGPISDVSGVLRGSNAFAMPSRSEGHSIAFLEALASGIPVVASTITPFQFAKTLPGVQLVDTDDTSAYAAALLT ALAQPKAPRSLAGLTLQDTAQRYLAVAQQVIGARV >Mature_355_residues MRILHLVLEPRLSGAEVLAKDLAIHQQREGSVVGVTALLPERPDFTPFTRELASHGVECVFPARRSRLPGKLIHLAAVLR RFRPDVLFAHATIPAFYARALPTNVPVIYVMHSAVNDFERKLFRNVERLLSSRARAVIGVSPANVRDYKDCVGSHPLVTL IPNGVDVSRFAFDDRPRSGDALPQIVQIGRYTSVKNQLQTVHAFSEVAAQVQDVRLQLYGVVEDPAYLAAIEDLVKKLGL EDRVSVDGPISDVSGVLRGSNAFAMPSRSEGHSIAFLEALASGIPVVASTITPFQFAKTLPGVQLVDTDDTSAYAAALLT ALAQPKAPRSLAGLTLQDTAQRYLAVAQQVIGARV
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38505; Mature: 38505
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILHLVLEPRLSGAEVLAKDLAIHQQREGSVVGVTALLPERPDFTPFTRELASHGVECV CCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHCCCEEE FPARRSRLPGKLIHLAAVLRRFRPDVLFAHATIPAFYARALPTNVPVIYVMHSAVNDFER ECHHHCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHH KLFRNVERLLSSRARAVIGVSPANVRDYKDCVGSHPLVTLIPNGVDVSRFAFDDRPRSGD HHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCCCEEEECCCCCCHHHHCCCCCCCCCC ALPQIVQIGRYTSVKNQLQTVHAFSEVAAQVQDVRLQLYGVVEDPAYLAAIEDLVKKLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHCCC EDRVSVDGPISDVSGVLRGSNAFAMPSRSEGHSIAFLEALASGIPVVASTITPFQFAKTL CCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHCCCCEEHHHCCHHHHHHHC PGVQLVDTDDTSAYAAALLTALAQPKAPRSLAGLTLQDTAQRYLAVAQQVIGARV CCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRILHLVLEPRLSGAEVLAKDLAIHQQREGSVVGVTALLPERPDFTPFTRELASHGVECV CCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHCCCEEE FPARRSRLPGKLIHLAAVLRRFRPDVLFAHATIPAFYARALPTNVPVIYVMHSAVNDFER ECHHHCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHH KLFRNVERLLSSRARAVIGVSPANVRDYKDCVGSHPLVTLIPNGVDVSRFAFDDRPRSGD HHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHCCCCEEEECCCCCCHHHHCCCCCCCCCC ALPQIVQIGRYTSVKNQLQTVHAFSEVAAQVQDVRLQLYGVVEDPAYLAAIEDLVKKLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHCCC EDRVSVDGPISDVSGVLRGSNAFAMPSRSEGHSIAFLEALASGIPVVASTITPFQFAKTL CCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHCCCCEEHHHCCHHHHHHHC PGVQLVDTDDTSAYAAALLTALAQPKAPRSLAGLTLQDTAQRYLAVAQQVIGARV CCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA