Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is 186477203

Identifier: 186477203

GI number: 186477203

Start: 2752687

End: 2753742

Strand: Direct

Name: 186477203

Synonym: Bphy_2454

Alternate gene names: NA

Gene position: 2752687-2753742 (Clockwise)

Preceding gene: 186477202

Following gene: 186477204

Centisome position: 79.12

GC content: 66.1

Gene sequence:

>1056_bases
ATGATCCGCCGACAGAACAACGCCTATCCGCTTCAGCCGCCGCGCGAACGCGGCACAGGGCGCGCCATTGCGCTCGCCGT
GCTGATGCACGTGCTGCTCGGGTTCTTCCTGTATCACGGCATTCACTGGCAGAACAGCACACCCGCGGGCGCCGAAGCCG
AACTGTGGACGGAAGTGCCCGACGTGCCGACGCCGCGCCCCGCTCCGCCGCCGCCCGCGCCTGCACCTGTCAAGCCCGCG
CCGCAGGTCAATGACGAGGAAGCCGAGATCGCACTGCAGGAGAAGAAGCGCAAGCAGCAGCAGGAAGCTGAGCGTCAGGC
TGAACTCGCCGAGCAGCAGCGCCGGCAGAAACTGCAGGCTCAGCAGGAAGCCGAGGCGAAGCGCCAGCAGCAACTCGCCG
CCGACCAGGCAGCCGCCGCCGCCAAGCTCAAGCAACAGCAGCAGCTGCAGGCCGAAAAGCTCAAGCAACAACAGCAGCAA
CAGCAAGCTGAAAAGCTCAAGCAGCAGCAGCTCGCCCAGCAGAAACAGGAGCAGTTGAAGAAGCAGCAGGAAGAGCAGCA
GAAGGAACAGGAAGCAAAGCAGGCGCAAGCCGAGGCCCAGGCCAAGGCCGACGCCGCGAAGGCAGCCAAGGCCAAAGCCC
AGGCGCAAGCGCAGGCCGAGGCCGCGAAGAAGCTGGACGCGGAACGCCGCCAGCGCCTCGCGTCGTTGCAGGGCATGGCG
GGCGGTGAAGGTTCGACGGGCAACGGTCTAGCGAAGAGTGGTACGGGCACGGGCTCGGGCGGCAACGCTGCGTCGCCCGG
TTATGCGGATAAGGTCAAACGCCGCGTACAACCGAACATCATCTGGTCGGGCGATACGTCGGGTCTCGAAACCGTCGTTT
CCGTGCGCTGCTCGCCGACGGGCACGCTGCTGAGCGCGACGATCACGCGCAGCAGCGGCAATCAGGCGTGGGACGATGCC
GCATTGCGCGCCGTGCAACGCTCGGATCCGATGCCGCAGGACATCAACGGCAAGACGCCCGAAAGCTTCAAGATTACGCT
GCGGCCGGCCGCCTGA

Upstream 100 bases:

>100_bases
TTGCCGCCGACAAGACGGTTAAATATGAAGTCGTGATGAACGTGATGTCCGACCTCAAGGCTCGCGGCGTCAAGCGCGTT
GGATTGCTCGTCAAATCGCA

Downstream 100 bases:

>100_bases
AGCCACGTTTACGGTTCGCCCGCTCGCGCGGGCCTAGCGGGAACGATTTCTGCTCAAGGCGGTCTGTTTGCAGTTGTGGA
GTGTTAGAAATTTGTTTTTT

Product: protein TolA

Products: NA

Alternate protein names: NB-Like; NB Family Protein; NB C-Terminal; LA-Related Transport Transmembrane Protein; Membrane Spanning Protein In lA-TolQ-TolR Complex; LA Family Protein; LA Protein; NB Protein; Protein la; NB-Like Protein; NB Domain-Containing Protein; TOLA-Like Transport Transmembrane Protein

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MIRRQNNAYPLQPPRERGTGRAIALAVLMHVLLGFFLYHGIHWQNSTPAGAEAELWTEVPDVPTPRPAPPPPAPAPVKPA
PQVNDEEAEIALQEKKRKQQQEAERQAELAEQQRRQKLQAQQEAEAKRQQQLAADQAAAAAKLKQQQQLQAEKLKQQQQQ
QQAEKLKQQQLAQQKQEQLKKQQEEQQKEQEAKQAQAEAQAKADAAKAAKAKAQAQAQAEAAKKLDAERRQRLASLQGMA
GGEGSTGNGLAKSGTGTGSGGNAASPGYADKVKRRVQPNIIWSGDTSGLETVVSVRCSPTGTLLSATITRSSGNQAWDDA
ALRAVQRSDPMPQDINGKTPESFKITLRPAA

Sequences:

>Translated_351_residues
MIRRQNNAYPLQPPRERGTGRAIALAVLMHVLLGFFLYHGIHWQNSTPAGAEAELWTEVPDVPTPRPAPPPPAPAPVKPA
PQVNDEEAEIALQEKKRKQQQEAERQAELAEQQRRQKLQAQQEAEAKRQQQLAADQAAAAAKLKQQQQLQAEKLKQQQQQ
QQAEKLKQQQLAQQKQEQLKKQQEEQQKEQEAKQAQAEAQAKADAAKAAKAKAQAQAQAEAAKKLDAERRQRLASLQGMA
GGEGSTGNGLAKSGTGTGSGGNAASPGYADKVKRRVQPNIIWSGDTSGLETVVSVRCSPTGTLLSATITRSSGNQAWDDA
ALRAVQRSDPMPQDINGKTPESFKITLRPAA
>Mature_351_residues
MIRRQNNAYPLQPPRERGTGRAIALAVLMHVLLGFFLYHGIHWQNSTPAGAEAELWTEVPDVPTPRPAPPPPAPAPVKPA
PQVNDEEAEIALQEKKRKQQQEAERQAELAEQQRRQKLQAQQEAEAKRQQQLAADQAAAAAKLKQQQQLQAEKLKQQQQQ
QQAEKLKQQQLAQQKQEQLKKQQEEQQKEQEAKQAQAEAQAKADAAKAAKAKAQAQAQAEAAKKLDAERRQRLASLQGMA
GGEGSTGNGLAKSGTGTGSGGNAASPGYADKVKRRVQPNIIWSGDTSGLETVVSVRCSPTGTLLSATITRSSGNQAWDDA
ALRAVQRSDPMPQDINGKTPESFKITLRPAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38155; Mature: 38155

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRQNNAYPLQPPRERGTGRAIALAVLMHVLLGFFLYHGIHWQNSTPAGAEAELWTEVP
CCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCC
DVPTPRPAPPPPAPAPVKPAPQVNDEEAEIALQEKKRKQQQEAERQAELAEQQRRQKLQA
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQEAEAKRQQQLAADQAAAAAKLKQQQQLQAEKLKQQQQQQQAEKLKQQQLAQQKQEQLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQQEEQQKEQEAKQAQAEAQAKADAAKAAKAKAQAQAQAEAAKKLDAERRQRLASLQGMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GGEGSTGNGLAKSGTGTGSGGNAASPGYADKVKRRVQPNIIWSGDTSGLETVVSVRCSPT
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCC
GTLLSATITRSSGNQAWDDAALRAVQRSDPMPQDINGKTPESFKITLRPAA
CHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MIRRQNNAYPLQPPRERGTGRAIALAVLMHVLLGFFLYHGIHWQNSTPAGAEAELWTEVP
CCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCC
DVPTPRPAPPPPAPAPVKPAPQVNDEEAEIALQEKKRKQQQEAERQAELAEQQRRQKLQA
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQEAEAKRQQQLAADQAAAAAKLKQQQQLQAEKLKQQQQQQQAEKLKQQQLAQQKQEQLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQQEEQQKEQEAKQAQAEAQAKADAAKAAKAKAQAQAQAEAAKKLDAERRQRLASLQGMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GGEGSTGNGLAKSGTGTGSGGNAASPGYADKVKRRVQPNIIWSGDTSGLETVVSVRCSPT
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCC
GTLLSATITRSSGNQAWDDAALRAVQRSDPMPQDINGKTPESFKITLRPAA
CHHHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA