Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186477192

Identifier: 186477192

GI number: 186477192

Start: 2744824

End: 2745243

Strand: Reverse

Name: 186477192

Synonym: Bphy_2443

Alternate gene names: NA

Gene position: 2745243-2744824 (Counterclockwise)

Preceding gene: 186477193

Following gene: 186477188

Centisome position: 78.9

GC content: 65.95

Gene sequence:

>420_bases
ATGAAGCCGAACACGCACGCATTCTCCCTGCTGGAACTGGTTGTCGCACTGGCGATCGCAGCGACGCTCGCTGCTTTCGC
AATACCGTCGTATCGCGACCATATCGCGAAGGCTCACCGAACCGATGCGGCGTCCGCGCTGTTTCGCGCGGCGCAGTTCG
CCGAGTCCGCCGTGCGTGCAGACGGTGCACCGTTGCCGGCCGGTCTGGATCAGGCGCCGCAAGGGGGCAAGGCGATCTAC
CGGCTGCGCATCCTGCCCGCCGACGACACGAACGGTGGCTACGCGCTCGAAGCGCAGCCGCTCGAAACCGGTCCGATGGC
CGGCGACGCGTGCGGCACGTTCATACTTGATGCAACAGGGCTAAGAAACAATCGGGGTGCAGCGGGCGCCAACCCCGACG
ATTGCTGGAGTGCGCGCTAG

Upstream 100 bases:

>100_bases
GGCTGCAATTGCAGCTGGTGATAGATGGCGGCGCAGTTGAAAGGCATTGGCGCCGGATTGCCGCGCGCCCCTTCTGAACG
CTGGTCTGATGAGGGTCGAC

Downstream 100 bases:

>100_bases
ATGGAAAACGCATCGACGACGCGCGCCATGTCAGGGCGGGTTCATATCGGCGTCCTCCGACGCGGCGGAGGACGCCGCCT
TGCGCGATTCCCGCTTCACC

Product: hypothetical protein

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein; Fimbrial Protein

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MKPNTHAFSLLELVVALAIAATLAAFAIPSYRDHIAKAHRTDAASALFRAAQFAESAVRADGAPLPAGLDQAPQGGKAIY
RLRILPADDTNGGYALEAQPLETGPMAGDACGTFILDATGLRNNRGAAGANPDDCWSAR

Sequences:

>Translated_139_residues
MKPNTHAFSLLELVVALAIAATLAAFAIPSYRDHIAKAHRTDAASALFRAAQFAESAVRADGAPLPAGLDQAPQGGKAIY
RLRILPADDTNGGYALEAQPLETGPMAGDACGTFILDATGLRNNRGAAGANPDDCWSAR
>Mature_139_residues
MKPNTHAFSLLELVVALAIAATLAAFAIPSYRDHIAKAHRTDAASALFRAAQFAESAVRADGAPLPAGLDQAPQGGKAIY
RLRILPADDTNGGYALEAQPLETGPMAGDACGTFILDATGLRNNRGAAGANPDDCWSAR

Specific function: Unknown

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14387; Mature: 14387

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPNTHAFSLLELVVALAIAATLAAFAIPSYRDHIAKAHRTDAASALFRAAQFAESAVRA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC
DGAPLPAGLDQAPQGGKAIYRLRILPADDTNGGYALEAQPLETGPMAGDACGTFILDATG
CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHEEECCC
LRNNRGAAGANPDDCWSAR
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKPNTHAFSLLELVVALAIAATLAAFAIPSYRDHIAKAHRTDAASALFRAAQFAESAVRA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC
DGAPLPAGLDQAPQGGKAIYRLRILPADDTNGGYALEAQPLETGPMAGDACGTFILDATG
CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCCHHHHHEEECCC
LRNNRGAAGANPDDCWSAR
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA