| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477191
Identifier: 186477191
GI number: 186477191
Start: 2744308
End: 2744793
Strand: Direct
Name: 186477191
Synonym: Bphy_2442
Alternate gene names: NA
Gene position: 2744308-2744793 (Clockwise)
Preceding gene: 186477190
Following gene: 186477199
Centisome position: 78.88
GC content: 66.26
Gene sequence:
>486_bases ATGAGCCAGGTCCATTCCGATAACGCATTTCGCAGCCGCCGACCGACCTCCAAAGATCTGAGCGCGCCGCATCTGCGCGC GCTGCGCAAGGAACTGCTGATCGTGCGCGCGGATGTCGAGCGAATGGAGCTCGCGCAGGCGACCTACGAACTTCGCAACG CGGTCACGCATTTCAGCTGGCTCAAGTTCATCGTGCCGGGATTCGGCGCGATGCGCTCGATGCCCTGGGGACGCCGGCGC GGCTGGGCCGCGAGCGGCATCGGCGCGTTGCTCAAGGACTACCCGCTGATCAGCTCGATCGTGTCGCTGGTGCTTGCCAA ACCGATCCGCAACAGTGTGCTCGGCGTGGCGAAGCCCACGCTCAAGTGGGGCGGCCTCGGCCTCGCGGCCTGGGAGGCCT TTCGCATCTATCAGCAGGTGAAGCGGGAATCGCGCAAGGCGGCGTCCTCCGCCGCGTCGGAGGACGCCGATATGAACCCG CCCTGA
Upstream 100 bases:
>100_bases CTTCGAAGCGACGCTTCACGAGTTCGAGAAAGACCGCGAGATTTTCCGCAAACACTGAACCGGGCGTCGTTCTCTTCCCT GTCCATCCATCGATAACTTC
Downstream 100 bases:
>100_bases CATGGCGCGCGTCGTCGATGCGTTTTCCATCTAGCGCGCACTCCAGCAATCGTCGGGGTTGGCGCCCGCTGCACCCCGAT TGTTTCTTAGCCCTGTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSQVHSDNAFRSRRPTSKDLSAPHLRALRKELLIVRADVERMELAQATYELRNAVTHFSWLKFIVPGFGAMRSMPWGRRR GWAASGIGALLKDYPLISSIVSLVLAKPIRNSVLGVAKPTLKWGGLGLAAWEAFRIYQQVKRESRKAASSAASEDADMNP P
Sequences:
>Translated_161_residues MSQVHSDNAFRSRRPTSKDLSAPHLRALRKELLIVRADVERMELAQATYELRNAVTHFSWLKFIVPGFGAMRSMPWGRRR GWAASGIGALLKDYPLISSIVSLVLAKPIRNSVLGVAKPTLKWGGLGLAAWEAFRIYQQVKRESRKAASSAASEDADMNP P >Mature_160_residues SQVHSDNAFRSRRPTSKDLSAPHLRALRKELLIVRADVERMELAQATYELRNAVTHFSWLKFIVPGFGAMRSMPWGRRRG WAASGIGALLKDYPLISSIVSLVLAKPIRNSVLGVAKPTLKWGGLGLAAWEAFRIYQQVKRESRKAASSAASEDADMNPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17900; Mature: 17769
Theoretical pI: Translated: 11.36; Mature: 11.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVHSDNAFRSRRPTSKDLSAPHLRALRKELLIVRADVERMELAQATYELRNAVTHFSW CCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKFIVPGFGAMRSMPWGRRRGWAASGIGALLKDYPLISSIVSLVLAKPIRNSVLGVAKPT HHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LKWGGLGLAAWEAFRIYQQVKRESRKAASSAASEDADMNPP HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SQVHSDNAFRSRRPTSKDLSAPHLRALRKELLIVRADVERMELAQATYELRNAVTHFSW CCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKFIVPGFGAMRSMPWGRRRGWAASGIGALLKDYPLISSIVSLVLAKPIRNSVLGVAKPT HHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LKWGGLGLAAWEAFRIYQQVKRESRKAASSAASEDADMNPP HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA