| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477142
Identifier: 186477142
GI number: 186477142
Start: 2685429
End: 2685929
Strand: Reverse
Name: 186477142
Synonym: Bphy_2391
Alternate gene names: NA
Gene position: 2685929-2685429 (Counterclockwise)
Preceding gene: 186477144
Following gene: 186477141
Centisome position: 77.2
GC content: 59.48
Gene sequence:
>501_bases ATGTGTCGACCACCTTCTCCCGGTGCGGCGGCCCTCTTTGGCGAGCAGCGGCCCAACGACCGATCTCTACCCACTTCGGT CAGACGACCATCACCGAAGCCGTCAGTCGGTCGAATGCGGGGGTTGATAGCTGGAGCCGCTCAAAGCGGCCGTTGGCGAC CTCACGCAATCGGCCATGAGCGGTCAGTCGACGCGCGCCTCCGGATCGTCGACAATCAAGATTCATCATCGGAAACTGGG CGTCGACGATATATGGATTGGACATTCCGGACGCGGTGGAAAGAAGAGCTGGTCTGCTCAAGTTCGATTGGCGGGTTGAT TCTCGAGATGCCGATGGGTGTCCCATCTATCTATCTGCCAACCGAAGCGGCGTGGCAAGCCTCTGCGCCTGAATGGGCGC GACCGTACTGGGACTCGATTCACACACAGCTAAAGTCGTGGTGTGCGCTCCACAGCTTTCCCCTCGTCGTGGACAGTACG GCAAGCGTGTTCAACGAGTAG
Upstream 100 bases:
>100_bases AAGCGATCGACAAGGAGACGGCTAGATCTCGGCAAAAAACGGAGCTATCGAGTAGCGCCAACGGCGTCACTGACTTCCCC TTCGAGAGGACAAAGGCGAG
Downstream 100 bases:
>100_bases CGCTGGGATTGACGATCGGCCATGAACACCACAAACCTTCTAAGCAAGATCGATCAGGCGCTAACAGGCATCGAACTCAA CTCTAGCGGCGCATCGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MCRPPSPGAAALFGEQRPNDRSLPTSVRRPSPKPSVGRMRGLIAGAAQSGRWRPHAIGHERSVDARLRIVDNQDSSSETG RRRYMDWTFRTRWKEELVCSSSIGGLILEMPMGVPSIYLPTEAAWQASAPEWARPYWDSIHTQLKSWCALHSFPLVVDST ASVFNE
Sequences:
>Translated_166_residues MCRPPSPGAAALFGEQRPNDRSLPTSVRRPSPKPSVGRMRGLIAGAAQSGRWRPHAIGHERSVDARLRIVDNQDSSSETG RRRYMDWTFRTRWKEELVCSSSIGGLILEMPMGVPSIYLPTEAAWQASAPEWARPYWDSIHTQLKSWCALHSFPLVVDST ASVFNE >Mature_166_residues MCRPPSPGAAALFGEQRPNDRSLPTSVRRPSPKPSVGRMRGLIAGAAQSGRWRPHAIGHERSVDARLRIVDNQDSSSETG RRRYMDWTFRTRWKEELVCSSSIGGLILEMPMGVPSIYLPTEAAWQASAPEWARPYWDSIHTQLKSWCALHSFPLVVDST ASVFNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18589; Mature: 18589
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRPPSPGAAALFGEQRPNDRSLPTSVRRPSPKPSVGRMRGLIAGAAQSGRWRPHAIGHE CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC RSVDARLRIVDNQDSSSETGRRRYMDWTFRTRWKEELVCSSSIGGLILEMPMGVPSIYLP CCCCEEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCEEECC TEAAWQASAPEWARPYWDSIHTQLKSWCALHSFPLVVDSTASVFNE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCHHHHHCC >Mature Secondary Structure MCRPPSPGAAALFGEQRPNDRSLPTSVRRPSPKPSVGRMRGLIAGAAQSGRWRPHAIGHE CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC RSVDARLRIVDNQDSSSETGRRRYMDWTFRTRWKEELVCSSSIGGLILEMPMGVPSIYLP CCCCEEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCEEECC TEAAWQASAPEWARPYWDSIHTQLKSWCALHSFPLVVDSTASVFNE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA