| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is mmlH [H]
Identifier: 186477114
GI number: 186477114
Start: 2654930
End: 2656237
Strand: Reverse
Name: mmlH [H]
Synonym: Bphy_2363
Alternate gene names: 186477114
Gene position: 2656237-2654930 (Counterclockwise)
Preceding gene: 186477115
Following gene: 186477113
Centisome position: 76.35
GC content: 63.53
Gene sequence:
>1308_bases ATGGACAGCAAGACACTCACGGCAAACGTCGACGATGCCGCCGACATGAACACAACGGCAGACACGCAAGCGCTTTCCTG GTACGCCGAAGCCAGTCCGCGCGCCCGTCGCGCGTTCTGGAGTTGCAAGGTCGGCTACATGCTCGACGGCATGGACACGC AGATGCTGTCGTTCGTCATTCCGACACTCGTCGCAACATGGGGCATCTCGCTCGCCGACGCCGGCTTCATCGGCACCATG ACGTTGCTGTCCTCGGCGCTCGGCGGCTGGATCGCGGGAATTCTGTCCGATCGCATTGGCCGCGTGCGCACTCTGCAGCT CACCGTGCTTTGGTTCGCGGTGTTCACTGCATTGTGCGGGCTCGCGCAGAACTACGGCCAGTTGCTGGCGGCGCGCGCGT TGATGGGCTTTGGCTTCGGTGGCGAGTGGACGGCGGGCGCCGTGCTGATCGGCGAAGTGATCCGTGCACGCGATCGGGGC AAGGCGGTCGGTCTCGTTCAGTCGGGCTGGGCGCTCGGCTGGGGCATGGCCGCTTTGCTCTACGCCGTGCTGTTTTCCGT GATGGCGCCGGAAATCGCGTGGCGCGCGTTGTTCCTGATCGGCCTTGTGCCGGCGCTGCTTGTGCTTTTCATCCGCCGCT ACGTGAAAGAACCCGAAGTATTCGAGCACGCAAAGGTCCACCAGAAACACACGCATGACACGCCGCGTTTCACCGAAATC TTCTCGCCCAGACTGCTTTCGACGACGCTGCGCGCCGCTCTGCTCACGACGGGCGCACAGGGCGGTTACTACGCGATCAC GACATGGCTGCCGACGTTTCTCAAGACCGAGCGTCATCTGACCGTGATGGGCACGGGCGGCTATCTCGCGATGATCATCG CGGGTTCGTATGTGGGCTATCTGTGCAGCGCGTGGCTCACGGACCGCATTGGCCGCAAACCGAACTTCATTCTGTTCGCG CTGGGTTCGATGGCAATTGCTTTCGCGTACACGTCTTTGCCGCTCACCAATGCGTCAATGCTGTGGCTCGGCTTTCCGCT CGGTTTCTTCGCGTCGGGCATCTTCTCCGGGATGGGCGCGTTTCTCACCGAACTCTTTCCGACCCGTGTGCGCGGCTCCG GCCAGGGGTTTTGCTACAACGTCGGCCGTGCGATCGGCGCACTGTTCCCCGTGCTGATCGGCACGCTGTCGAGCCGCTTC GGCCTCGGCGCGAGCATCGGCCTGTTCGCGGTGGCCGCGTATGGCGTGCTGATCATCGCCGCGCTCACGCTGCCCGAAAC ACGCGGCCGTGAACTCGAATCGGCCTGA
Upstream 100 bases:
>100_bases CTCGAAGCCATCCGGCCATCCAGCCCGGAGGGAATGACGCATCCCTACGCTCGTGCGCGGCTTCGCTTGTTACTCATGCG TCTATCCACGGGAGCAACAG
Downstream 100 bases:
>100_bases ACCGCACGCTTTTCACCTCATTCCATTTTTCGCATCAAGCCCACGACATGATGAAGCACGATCAAGCCTCCGATGTTTGC ACGCCGTCCCGCTGGCAGTT
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MDSKTLTANVDDAADMNTTADTQALSWYAEASPRARRAFWSCKVGYMLDGMDTQMLSFVIPTLVATWGISLADAGFIGTM TLLSSALGGWIAGILSDRIGRVRTLQLTVLWFAVFTALCGLAQNYGQLLAARALMGFGFGGEWTAGAVLIGEVIRARDRG KAVGLVQSGWALGWGMAALLYAVLFSVMAPEIAWRALFLIGLVPALLVLFIRRYVKEPEVFEHAKVHQKHTHDTPRFTEI FSPRLLSTTLRAALLTTGAQGGYYAITTWLPTFLKTERHLTVMGTGGYLAMIIAGSYVGYLCSAWLTDRIGRKPNFILFA LGSMAIAFAYTSLPLTNASMLWLGFPLGFFASGIFSGMGAFLTELFPTRVRGSGQGFCYNVGRAIGALFPVLIGTLSSRF GLGASIGLFAVAAYGVLIIAALTLPETRGRELESA
Sequences:
>Translated_435_residues MDSKTLTANVDDAADMNTTADTQALSWYAEASPRARRAFWSCKVGYMLDGMDTQMLSFVIPTLVATWGISLADAGFIGTM TLLSSALGGWIAGILSDRIGRVRTLQLTVLWFAVFTALCGLAQNYGQLLAARALMGFGFGGEWTAGAVLIGEVIRARDRG KAVGLVQSGWALGWGMAALLYAVLFSVMAPEIAWRALFLIGLVPALLVLFIRRYVKEPEVFEHAKVHQKHTHDTPRFTEI FSPRLLSTTLRAALLTTGAQGGYYAITTWLPTFLKTERHLTVMGTGGYLAMIIAGSYVGYLCSAWLTDRIGRKPNFILFA LGSMAIAFAYTSLPLTNASMLWLGFPLGFFASGIFSGMGAFLTELFPTRVRGSGQGFCYNVGRAIGALFPVLIGTLSSRF GLGASIGLFAVAAYGVLIIAALTLPETRGRELESA >Mature_435_residues MDSKTLTANVDDAADMNTTADTQALSWYAEASPRARRAFWSCKVGYMLDGMDTQMLSFVIPTLVATWGISLADAGFIGTM TLLSSALGGWIAGILSDRIGRVRTLQLTVLWFAVFTALCGLAQNYGQLLAARALMGFGFGGEWTAGAVLIGEVIRARDRG KAVGLVQSGWALGWGMAALLYAVLFSVMAPEIAWRALFLIGLVPALLVLFIRRYVKEPEVFEHAKVHQKHTHDTPRFTEI FSPRLLSTTLRAALLTTGAQGGYYAITTWLPTFLKTERHLTVMGTGGYLAMIIAGSYVGYLCSAWLTDRIGRKPNFILFA LGSMAIAFAYTSLPLTNASMLWLGFPLGFFASGIFSGMGAFLTELFPTRVRGSGQGFCYNVGRAIGALFPVLIGTLSSRF GLGASIGLFAVAAYGVLIIAALTLPETRGRELESA
Specific function: Probable uptake of 4-methylmuconolactone [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=451, Percent_Identity=25.2771618625277, Blast_Score=93, Evalue=5e-19, Organism=Homo sapiens, GI213021148, Length=444, Percent_Identity=24.0990990990991, Blast_Score=85, Evalue=1e-16, Organism=Escherichia coli, GI87082404, Length=400, Percent_Identity=29.5, Blast_Score=151, Evalue=1e-37, Organism=Escherichia coli, GI87082231, Length=225, Percent_Identity=30.2222222222222, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1790550, Length=388, Percent_Identity=27.0618556701031, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI87081723, Length=393, Percent_Identity=27.2264631043257, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1788292, Length=460, Percent_Identity=27.8260869565217, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1786229, Length=420, Percent_Identity=25.4761904761905, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1789941, Length=388, Percent_Identity=27.8350515463918, Blast_Score=65, Evalue=9e-12, Organism=Escherichia coli, GI87082159, Length=413, Percent_Identity=26.1501210653753, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI32564663, Length=438, Percent_Identity=23.7442922374429, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI19922874, Length=469, Percent_Identity=24.0938166311301, Blast_Score=84, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46832; Mature: 46832
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSKTLTANVDDAADMNTTADTQALSWYAEASPRARRAFWSCKVGYMLDGMDTQMLSFVI CCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCEECCEECCCHHHHHHHHH PTLVATWGISLADAGFIGTMTLLSSALGGWIAGILSDRIGRVRTLQLTVLWFAVFTALCG HHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LAQNYGQLLAARALMGFGFGGEWTAGAVLIGEVIRARDRGKAVGLVQSGWALGWGMAALL HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHCCCHHHHHHHHHH YAVLFSVMAPEIAWRALFLIGLVPALLVLFIRRYVKEPEVFEHAKVHQKHTHDTPRFTEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHH FSPRLLSTTLRAALLTTGAQGGYYAITTWLPTFLKTERHLTVMGTGGYLAMIIAGSYVGY HCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHH LCSAWLTDRIGRKPNFILFALGSMAIAFAYTSLPLTNASMLWLGFPLGFFASGIFSGMGA HHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHH FLTELFPTRVRGSGQGFCYNVGRAIGALFPVLIGTLSSRFGLGASIGLFAVAAYGVLIIA HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ALTLPETRGRELESA HHHCCCCCCCCCCCC >Mature Secondary Structure MDSKTLTANVDDAADMNTTADTQALSWYAEASPRARRAFWSCKVGYMLDGMDTQMLSFVI CCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCEECCEECCCHHHHHHHHH PTLVATWGISLADAGFIGTMTLLSSALGGWIAGILSDRIGRVRTLQLTVLWFAVFTALCG HHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LAQNYGQLLAARALMGFGFGGEWTAGAVLIGEVIRARDRGKAVGLVQSGWALGWGMAALL HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHCCCHHHHHHHHHH YAVLFSVMAPEIAWRALFLIGLVPALLVLFIRRYVKEPEVFEHAKVHQKHTHDTPRFTEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHH FSPRLLSTTLRAALLTTGAQGGYYAITTWLPTFLKTERHLTVMGTGGYLAMIIAGSYVGY HCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHH LCSAWLTDRIGRKPNFILFALGSMAIAFAYTSLPLTNASMLWLGFPLGFFASGIFSGMGA HHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHH FLTELFPTRVRGSGQGFCYNVGRAIGALFPVLIGTLSSRFGLGASIGLFAVAAYGVLIIA HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ALTLPETRGRELESA HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9461415 [H]