| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477111
Identifier: 186477111
GI number: 186477111
Start: 2650114
End: 2650566
Strand: Direct
Name: 186477111
Synonym: Bphy_2360
Alternate gene names: NA
Gene position: 2650114-2650566 (Clockwise)
Preceding gene: 186477109
Following gene: 186477112
Centisome position: 76.17
GC content: 56.95
Gene sequence:
>453_bases ATGGACGAACAGATCAAGGAAAAGATCCTGTCATTGCTGGATCAGCACCGAATCATGACGATCGCCACGCTAAGGCCGGA CGGCTGGCCGCAGGCGACCACCGTTGGGTATGTGAGCCAGGGACTGACGCTTTACTTCCTTTGCGGTCTGGAAAGTCAGA AGGCCGCCAATCTGGCCCGGGACGACCGGGTATCGCTCACGATCGACCACGACACGTCAGATCTGATGGCGATTACCGGT CTGTCGATGGCGGCGCACGCACAACCAGTAAACGATCGCGCCGAAGCAGAGAGGGTCTTGCGCATGCTTCCACTGAAGTA TCCGGATATGCACGCGCTGCCGATGCCAATGCCGTCTCCTGACGAAGTCCGGATATTTCGTGTGACTCCGACAGTCATTT CGGTGCTCGATTATTCGCAAGGCTTCGGGCACACCGAACTTTGCACTTGCTAA
Upstream 100 bases:
>100_bases CGTGCATCTCGAAGTCGGTCATCTTCGGTATTTGATTTGTATCAAGCGCCGGATGACCCGGTGGTACAGGATAGGATTTT CACGAACCGGAAGGTGATCC
Downstream 100 bases:
>100_bases ATCTCCTTGCATATCGCAAACGCAAAACTCAATGACGCGGTGCTCACATCGTCCCAGGTGGGCGGCCTGCGCCAAAGCGG GCTGCCTTTATGCATTGATC
Product: pyridoxamine 5'-phosphate oxidase-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MDEQIKEKILSLLDQHRIMTIATLRPDGWPQATTVGYVSQGLTLYFLCGLESQKAANLARDDRVSLTIDHDTSDLMAITG LSMAAHAQPVNDRAEAERVLRMLPLKYPDMHALPMPMPSPDEVRIFRVTPTVISVLDYSQGFGHTELCTC
Sequences:
>Translated_150_residues MDEQIKEKILSLLDQHRIMTIATLRPDGWPQATTVGYVSQGLTLYFLCGLESQKAANLARDDRVSLTIDHDTSDLMAITG LSMAAHAQPVNDRAEAERVLRMLPLKYPDMHALPMPMPSPDEVRIFRVTPTVISVLDYSQGFGHTELCTC >Mature_150_residues MDEQIKEKILSLLDQHRIMTIATLRPDGWPQATTVGYVSQGLTLYFLCGLESQKAANLARDDRVSLTIDHDTSDLMAITG LSMAAHAQPVNDRAEAERVLRMLPLKYPDMHALPMPMPSPDEVRIFRVTPTVISVLDYSQGFGHTELCTC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16727; Mature: 16727
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEQIKEKILSLLDQHRIMTIATLRPDGWPQATTVGYVSQGLTLYFLCGLESQKAANLAR CCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHCCCEEEEEECCCCHHHHCCCC DDRVSLTIDHDTSDLMAITGLSMAAHAQPVNDRAEAERVLRMLPLKYPDMHALPMPMPSP CCEEEEEEECCCCCCHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC DEVRIFRVTPTVISVLDYSQGFGHTELCTC CCEEEEEECHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MDEQIKEKILSLLDQHRIMTIATLRPDGWPQATTVGYVSQGLTLYFLCGLESQKAANLAR CCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHCCCEEEEEECCCCHHHHCCCC DDRVSLTIDHDTSDLMAITGLSMAAHAQPVNDRAEAERVLRMLPLKYPDMHALPMPMPSP CCEEEEEEECCCCCCHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC DEVRIFRVTPTVISVLDYSQGFGHTELCTC CCEEEEEECHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA