| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477099
Identifier: 186477099
GI number: 186477099
Start: 2634464
End: 2634859
Strand: Direct
Name: 186477099
Synonym: Bphy_2348
Alternate gene names: NA
Gene position: 2634464-2634859 (Clockwise)
Preceding gene: 186477098
Following gene: 186477105
Centisome position: 75.72
GC content: 63.13
Gene sequence:
>396_bases ATGTCCAATAGTGAAAGCGTCTTCGCAGCGTGCGCCTTGTGGCGGTTCATCACGCGTGTCATTTCTTCGAGCAAGGAGTT CATCGTGCGCAACCTCATCGCGACGCTTCAAGTGACCATTGCCCTCTTGCTGTCGACGAGCGCGGCGCTCACGCTGGCGC AAGGGCTTTCCACGTATGACGACGTCAACGCACCCGCCAACAGTACCCGCCTGATGCCCAACGCGGCGCGCGGCAGCGAA TATCCGACGCACGGCAACCAGCAGGCGGGCGAACTCAATCTGAATCCGACCGATCCGCGCGCGCAGCTCGTCAACGGCAC GCCGAACAACGCGCAATCGGGCGGATATGGCTCGCCGCTCGCGGGTGTGCGCACTGCCGTGCAACCGGGCCAATAG
Upstream 100 bases:
>100_bases CGAGAGCTGGGCGGGTTTAACGAAAACCTGCAACAAAAACGCGACGCGATCCGCGCATAGCGCACATCCGCGAGCGCGAC GCCTTGAACTCGCGAAAGCG
Downstream 100 bases:
>100_bases CGCGCATCGCGGGCATAAAGATAAAAAAGCCCGCTTACGCGGGCAACCTTCTACCAGGAGACATCGACGAAACACGCTCA GCCTTTCGTGGCGCCGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MSNSESVFAACALWRFITRVISSSKEFIVRNLIATLQVTIALLLSTSAALTLAQGLSTYDDVNAPANSTRLMPNAARGSE YPTHGNQQAGELNLNPTDPRAQLVNGTPNNAQSGGYGSPLAGVRTAVQPGQ
Sequences:
>Translated_131_residues MSNSESVFAACALWRFITRVISSSKEFIVRNLIATLQVTIALLLSTSAALTLAQGLSTYDDVNAPANSTRLMPNAARGSE YPTHGNQQAGELNLNPTDPRAQLVNGTPNNAQSGGYGSPLAGVRTAVQPGQ >Mature_130_residues SNSESVFAACALWRFITRVISSSKEFIVRNLIATLQVTIALLLSTSAALTLAQGLSTYDDVNAPANSTRLMPNAARGSEY PTHGNQQAGELNLNPTDPRAQLVNGTPNNAQSGGYGSPLAGVRTAVQPGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13745; Mature: 13613
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSESVFAACALWRFITRVISSSKEFIVRNLIATLQVTIALLLSTSAALTLAQGLSTYD CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH DVNAPANSTRLMPNAARGSEYPTHGNQQAGELNLNPTDPRAQLVNGTPNNAQSGGYGSPL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCH AGVRTAVQPGQ HHHHHHCCCCC >Mature Secondary Structure SNSESVFAACALWRFITRVISSSKEFIVRNLIATLQVTIALLLSTSAALTLAQGLSTYD CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH DVNAPANSTRLMPNAARGSEYPTHGNQQAGELNLNPTDPRAQLVNGTPNNAQSGGYGSPL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCH AGVRTAVQPGQ HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA