| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is cysC [H]
Identifier: 186477083
GI number: 186477083
Start: 2615093
End: 2615752
Strand: Direct
Name: cysC [H]
Synonym: Bphy_2332
Alternate gene names: 186477083
Gene position: 2615093-2615752 (Clockwise)
Preceding gene: 186477082
Following gene: 186477086
Centisome position: 75.16
GC content: 61.52
Gene sequence:
>660_bases GTGCCCAACAGTCGCCAGGCTCGCGATGAGCCGGAAAACCGCGCGCCCGTCGAACGCATACGGCCTCATGTCCAACGCTT CAATGGCGCGATCACAGACCGCGACCGCGCGGCGCTGCTCGGCCACATGCCCGTCACCGTGTGGCTCACGGGTTTGTCGG GCGCGGGGAAGTCAACCATCGCGTTTCATCTGGAGCGCGAACTGATGTCGATGGGGCACGCGTGTTATGTGCTCGATGGC GACAACATCCGTCACGGTTTGACGAGCGACCTCGGCTTTTCGAAGGAAGATCGCCGGGAGAACATTCGCCGCGTCGCGCA CGTCGCGCGACTGATGAACGACGCCGGGCTGATCGTGATTGCCGCGCTGATTTCGCCGATGCGCGAAGACCGGGAGATGG CGTGCGCCATCATCGGCAATGACAGCTTTGTCGAGACTTATGTAGCCGCTTCAGCAAACGATTGCGCGAAACGCGACCCC AAAGGGCTCTATGCGAAGGCGCAAGCAGGCATCATCGAATCGTTCACGGGTGTGACCGCGCCGTACGAACCACCGGAGAA TCCCGAACTGCTCGTCGATACGGCGACGCTGACAGAAGCAGCCAGCGTATCGTGTGTGCTCGAATATTTGCGGGAACGCT TTCTGGTGCTGCGACGCTGA
Upstream 100 bases:
>100_bases TTTCTACGGCGGAAACAAACGGATAACCGAATTGGAACACCTCCGCCCCAGCGCTGCTGCTGGCGCTCCCGATGCGCGTG CACGCTGCGTTCAAAGCAGC
Downstream 100 bases:
>100_bases AGCCGTCGTGCACTAGCTCAATCGCTTGCTACAACCAGAGCACCAAAAGAAAAACCCGCATCGCTGCGGGTTTTTCTTTT TTTGGCACGGGAAGCACGCT
Product: adenylyl-sulfate kinase
Products: NA
Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase [H]
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MPNSRQARDEPENRAPVERIRPHVQRFNGAITDRDRAALLGHMPVTVWLTGLSGAGKSTIAFHLERELMSMGHACYVLDG DNIRHGLTSDLGFSKEDRRENIRRVAHVARLMNDAGLIVIAALISPMREDREMACAIIGNDSFVETYVAASANDCAKRDP KGLYAKAQAGIIESFTGVTAPYEPPENPELLVDTATLTEAASVSCVLEYLRERFLVLRR
Sequences:
>Translated_219_residues MPNSRQARDEPENRAPVERIRPHVQRFNGAITDRDRAALLGHMPVTVWLTGLSGAGKSTIAFHLERELMSMGHACYVLDG DNIRHGLTSDLGFSKEDRRENIRRVAHVARLMNDAGLIVIAALISPMREDREMACAIIGNDSFVETYVAASANDCAKRDP KGLYAKAQAGIIESFTGVTAPYEPPENPELLVDTATLTEAASVSCVLEYLRERFLVLRR >Mature_218_residues PNSRQARDEPENRAPVERIRPHVQRFNGAITDRDRAALLGHMPVTVWLTGLSGAGKSTIAFHLERELMSMGHACYVLDGD NIRHGLTSDLGFSKEDRRENIRRVAHVARLMNDAGLIVIAALISPMREDREMACAIIGNDSFVETYVAASANDCAKRDPK GLYAKAQAGIIESFTGVTAPYEPPENPELLVDTATLTEAASVSCVLEYLRERFLVLRR
Specific function: Catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI62912492, Length=178, Percent_Identity=51.685393258427, Blast_Score=172, Evalue=2e-43, Organism=Homo sapiens, GI34447231, Length=178, Percent_Identity=51.685393258427, Blast_Score=172, Evalue=2e-43, Organism=Homo sapiens, GI46094058, Length=178, Percent_Identity=51.123595505618, Blast_Score=172, Evalue=2e-43, Organism=Escherichia coli, GI1789107, Length=186, Percent_Identity=47.3118279569892, Blast_Score=173, Evalue=7e-45, Organism=Caenorhabditis elegans, GI17542422, Length=192, Percent_Identity=51.0416666666667, Blast_Score=186, Evalue=6e-48, Organism=Saccharomyces cerevisiae, GI6322852, Length=182, Percent_Identity=46.1538461538462, Blast_Score=160, Evalue=2e-40, Organism=Drosophila melanogaster, GI24667032, Length=180, Percent_Identity=47.7777777777778, Blast_Score=164, Evalue=3e-41, Organism=Drosophila melanogaster, GI24667028, Length=180, Percent_Identity=47.7777777777778, Blast_Score=164, Evalue=3e-41, Organism=Drosophila melanogaster, GI24667036, Length=180, Percent_Identity=47.7777777777778, Blast_Score=164, Evalue=3e-41, Organism=Drosophila melanogaster, GI116007838, Length=180, Percent_Identity=47.7777777777778, Blast_Score=164, Evalue=3e-41, Organism=Drosophila melanogaster, GI24667044, Length=180, Percent_Identity=47.7777777777778, Blast_Score=164, Evalue=3e-41, Organism=Drosophila melanogaster, GI24667040, Length=180, Percent_Identity=47.7777777777778, Blast_Score=164, Evalue=4e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 [H]
Pfam domain/function: PF01583 APS_kinase [H]
EC number: =2.7.1.25 [H]
Molecular weight: Translated: 24217; Mature: 24086
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNSRQARDEPENRAPVERIRPHVQRFNGAITDRDRAALLGHMPVTVWLTGLSGAGKSTI CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCHH AFHLERELMSMGHACYVLDGDNIRHGLTSDLGFSKEDRRENIRRVAHVARLMNDAGLIVI HHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH AALISPMREDREMACAIIGNDSFVETYVAASANDCAKRDPKGLYAKAQAGIIESFTGVTA HHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCC PYEPPENPELLVDTATLTEAASVSCVLEYLRERFLVLRR CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PNSRQARDEPENRAPVERIRPHVQRFNGAITDRDRAALLGHMPVTVWLTGLSGAGKSTI CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCHH AFHLERELMSMGHACYVLDGDNIRHGLTSDLGFSKEDRRENIRRVAHVARLMNDAGLIVI HHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH AALISPMREDREMACAIIGNDSFVETYVAASANDCAKRDPKGLYAKAQAGIIESFTGVTA HHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCC PYEPPENPELLVDTATLTEAASVSCVLEYLRERFLVLRR CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA