| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is pyrR [H]
Identifier: 186477076
GI number: 186477076
Start: 2609906
End: 2610418
Strand: Reverse
Name: pyrR [H]
Synonym: Bphy_2325
Alternate gene names: 186477076
Gene position: 2610418-2609906 (Counterclockwise)
Preceding gene: 186477077
Following gene: 186477075
Centisome position: 75.03
GC content: 66.67
Gene sequence:
>513_bases ATGAGTTCCGTTGACGCCGAGGCGCTCTACCGCGCCGTGCTCGAACAGATTCGCACCGCATACGGCGACGCGCTGGGCGG TTCCGATGGCGCGGTGCTCGCCGGCATCTATAGCGGCGGCGCATGGCTCGCCGAGCGTCTGGCGAAAGATCTGAACGTGT CGACGTTCGGCGTCGTCAACGTTGCGCTGCATCGCGACGACTACGCGAAGAAAGGTTTGCATACGCAGGCGAGTCCCACG TCGTTGCCGTTCGAGGTGGAAGGCCGCCGAATCGTGCTCGTCGACGACGTGCTGTACACCGGCCGCACCGTGCGCGCCGC GCTGAACGAACTCTACGACTATGGGCGGCCCGCATCGGTCGAACTCGCGGTGCTCGCCGATCGTGGTGGCCGCGAGCTCC CCGTGGCGGCGCGCTTCGTCGGTGGCACGCTCGACGTGCCGGCCAATGCAACGCTCGTACTGTCGCGCGACGGCGAGCGC TTCACTTTTCACACCGAGCCGCGTGCGCATTGA
Upstream 100 bases:
>100_bases AGCGGGACGCGGCAGGCGGGCATGCTCGACGCAGAAGCCGCGTGCATCATTCTTCAGCAATATCTGGACGGACTGAGTCT GGAAGGACCAAGCGACGATC
Downstream 100 bases:
>100_bases ATGCGGCGCTTCGGCATCGAAAGCAATACGGGCAGCACACGCAGTCCCAGTCTGATTCAGGAACACCATGAACACGCCCA ACCCGGTTTCCCAAGGTTCC
Product: bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase
Products: NA
Alternate protein names: Pyrimidine operon regulatory protein; Uracil phosphoribosyltransferase; UPRTase [H]
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MSSVDAEALYRAVLEQIRTAYGDALGGSDGAVLAGIYSGGAWLAERLAKDLNVSTFGVVNVALHRDDYAKKGLHTQASPT SLPFEVEGRRIVLVDDVLYTGRTVRAALNELYDYGRPASVELAVLADRGGRELPVAARFVGGTLDVPANATLVLSRDGER FTFHTEPRAH
Sequences:
>Translated_170_residues MSSVDAEALYRAVLEQIRTAYGDALGGSDGAVLAGIYSGGAWLAERLAKDLNVSTFGVVNVALHRDDYAKKGLHTQASPT SLPFEVEGRRIVLVDDVLYTGRTVRAALNELYDYGRPASVELAVLADRGGRELPVAARFVGGTLDVPANATLVLSRDGER FTFHTEPRAH >Mature_169_residues SSVDAEALYRAVLEQIRTAYGDALGGSDGAVLAGIYSGGAWLAERLAKDLNVSTFGVVNVALHRDDYAKKGLHTQASPTS LPFEVEGRRIVLVDDVLYTGRTVRAALNELYDYGRPASVELAVLADRGGRELPVAARFVGGTLDVPANATLVLSRDGERF TFHTEPRAH
Specific function: Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant [H]
COG id: COG2065
COG function: function code F; Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 - InterPro: IPR023050 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.9 [H]
Molecular weight: Translated: 18244; Mature: 18113
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVDAEALYRAVLEQIRTAYGDALGGSDGAVLAGIYSGGAWLAERLAKDLNVSTFGVVN CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCEEEEEE VALHRDDYAKKGLHTQASPTSLPFEVEGRRIVLVDDVLYTGRTVRAALNELYDYGRPASV EEEECCHHHHCCCCCCCCCCCCCEEECCCEEEEECCCHHCCHHHHHHHHHHHHCCCCCCE ELAVLADRGGRELPVAARFVGGTLDVPANATLVLSRDGERFTFHTEPRAH EEEEEECCCCCCCCEEEEEECCEEECCCCEEEEEECCCCEEEEECCCCCC >Mature Secondary Structure SSVDAEALYRAVLEQIRTAYGDALGGSDGAVLAGIYSGGAWLAERLAKDLNVSTFGVVN CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCEEEEEE VALHRDDYAKKGLHTQASPTSLPFEVEGRRIVLVDDVLYTGRTVRAALNELYDYGRPASV EEEECCHHHHCCCCCCCCCCCCCEEECCCEEEEECCCHHCCHHHHHHHHHHHHCCCCCCE ELAVLADRGGRELPVAARFVGGTLDVPANATLVLSRDGERFTFHTEPRAH EEEEEECCCCCCCCEEEEEECCEEECCCCEEEEEECCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]