| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477052
Identifier: 186477052
GI number: 186477052
Start: 2584363
End: 2586114
Strand: Reverse
Name: 186477052
Synonym: Bphy_2301
Alternate gene names: NA
Gene position: 2586114-2584363 (Counterclockwise)
Preceding gene: 186477053
Following gene: 186477051
Centisome position: 74.33
GC content: 51.37
Gene sequence:
>1752_bases ATGAACAAAAGCAAAATTCTTAACGCCGGACGTAGTGATGCCGTTGTATACATCCTATTTGGAGTCCTGCTCGCATTTTT CACCTATCAGTCCGTACACTGGCTGGTCGAATATCGCTTTGGACAATCGTTGGATATTGATGAGTCAGGATATCTGACGC TCGCGCTGTCGTTCGCAAAAGCCAAACTAAATGCGGGCTGGATTGGTTGGTGGCGGGCTCTTTCTGCCCCCTTGGGTTTT GCTCCGTTGGCTCCTGCTGTCGCCTCGTTAGCGATGGTTGTATTCGGGGTCAACGAGAACTATGGCATTCTTTGCAATGT TGGCTTCGCGGTGGGAACGCTAGTGTTGCTGTTCACCGTGCTGCGGCGTTCGTCATTGCCGCATGCGTTGCTTGCTTGCA TTCTATTGGCATCGATGCAGAACTTCGTGATGTTCAGCCGTAGCTTTCAGTTTGTCACGGCGACGACATTCTTCTTCTTT GCTGCCTTCGCCTGCTTCGTATTTTCCGATGGCTTTCGCCGCAGTTCCTATTCCGCACTTCTGGGGGCAACTCTCGGATG CATGGTATTGTCGCGGACGATGGCGCTCGCTTTCTTGCCGGCCTTTGTGCTTTCGTTTCTCATTTACCTTTACCTGGCGC GTGCTTTCTCGCGCGATACGATCAAGAACATCGTGCTGTCAATCGTTGTATTTCTCGTAGTTGCCGCGCCGTGGTATCTG AGAAATTTCGAAACCGTATTCGGATATCTGTTTTCATTCGGCTACGGGGCGCACGCCGCTGAGTACGGTCAGTCGCGAGG AATTTTCACATTGGCAAATTTGTACCTGCGCATTCGATGGGTGCTCGTCCAAATGCGCTTGCCTCATTTCGTCCTGATCG TGCCGATCTTCATCGCAGGGTTTATATTTTCGGTCTTTCGAAAAGCGCGGAGTCTCGGCGACAATCTGATTATCTCGGGT GTTGTGCTTTGTCTCGGATGCTTTTTTGTGCTTTCGACGAGTCAAAATATGGGGACGGGCTTTGATTCCCCTATTTATAC TGTGATGATTTTTTGTGTCGCAGCCTGGCTTGCCAAGCGCGGCCTACGGTGGTTGCAACCCGTGTACTTCGCATTAGTGA TCGTGTTTTTTTCAATAGCGGCGTACGCACATAACGATGTGCAGCGCTGCGAGGCACTGCCAAAGCCTCTCGGTCAACGA TTTGGTAAGGACGATCTAGCTGGCCCTTGGCTGAATTGCGGGACGGTGCTGCAAAGCTGGCTGGAGCAGAACGGCTATCC TCCTGAGGACACGCCGGATCGTGTTCTGACTCGTGACGGTGCGATCGAGTGGCGACATATAAGTAAGGCGGTTTCAGATT ATCTGTCGACGGCAGACGTCAACAAAGGACCGGTTTTATTCCTTTCGCGCCATATGATACTGAACGTCAATACAGTTGGA TTGGAATTGATCAAGAAATTCGGCTACAACCTGCCGATGATTCAAATCGATCCGGGGACGCTCAAGCCTGACGTGAAGTC TTATGGGGAATGGCTAGCCCAGCCTCCTCAAGACTCAGCATGCTTTGCATTGATGCTAAATCAATCGAATGGGGAGTTCT ATCCACGCGCGGACCTCGCGACGATGGAATCTGCTCTAAAAGCCTCCGGATTCCAGCAGGTTAAGGATTTCCCAACTCCG CGCCCCGGTCAGCGTCTTGGTGTGTGGAAAAGAAACGCAGCGAGTTGCAACGCTGGATTTGCAATGAAGTGA
Upstream 100 bases:
>100_bases TGGTAAAAGTCTCGATCTTCAGATAATTGCCAGGAATCAATTCGCGCCTAAACGCAGAGCGAAGGAATCAGGGCTTAGGT CTTCAATATTGGACGCGGTA
Downstream 100 bases:
>100_bases GGGAACGACTTCGAAAATTGGCTTAGCTAGGTGTTTTGCCTGATGCCTACCAAGCACTTGAGTCTGTGTTCCGGCAATCA GGGTGGCGCAAATGCCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 583; Mature: 583
Protein sequence:
>583_residues MNKSKILNAGRSDAVVYILFGVLLAFFTYQSVHWLVEYRFGQSLDIDESGYLTLALSFAKAKLNAGWIGWWRALSAPLGF APLAPAVASLAMVVFGVNENYGILCNVGFAVGTLVLLFTVLRRSSLPHALLACILLASMQNFVMFSRSFQFVTATTFFFF AAFACFVFSDGFRRSSYSALLGATLGCMVLSRTMALAFLPAFVLSFLIYLYLARAFSRDTIKNIVLSIVVFLVVAAPWYL RNFETVFGYLFSFGYGAHAAEYGQSRGIFTLANLYLRIRWVLVQMRLPHFVLIVPIFIAGFIFSVFRKARSLGDNLIISG VVLCLGCFFVLSTSQNMGTGFDSPIYTVMIFCVAAWLAKRGLRWLQPVYFALVIVFFSIAAYAHNDVQRCEALPKPLGQR FGKDDLAGPWLNCGTVLQSWLEQNGYPPEDTPDRVLTRDGAIEWRHISKAVSDYLSTADVNKGPVLFLSRHMILNVNTVG LELIKKFGYNLPMIQIDPGTLKPDVKSYGEWLAQPPQDSACFALMLNQSNGEFYPRADLATMESALKASGFQQVKDFPTP RPGQRLGVWKRNAASCNAGFAMK
Sequences:
>Translated_583_residues MNKSKILNAGRSDAVVYILFGVLLAFFTYQSVHWLVEYRFGQSLDIDESGYLTLALSFAKAKLNAGWIGWWRALSAPLGF APLAPAVASLAMVVFGVNENYGILCNVGFAVGTLVLLFTVLRRSSLPHALLACILLASMQNFVMFSRSFQFVTATTFFFF AAFACFVFSDGFRRSSYSALLGATLGCMVLSRTMALAFLPAFVLSFLIYLYLARAFSRDTIKNIVLSIVVFLVVAAPWYL RNFETVFGYLFSFGYGAHAAEYGQSRGIFTLANLYLRIRWVLVQMRLPHFVLIVPIFIAGFIFSVFRKARSLGDNLIISG VVLCLGCFFVLSTSQNMGTGFDSPIYTVMIFCVAAWLAKRGLRWLQPVYFALVIVFFSIAAYAHNDVQRCEALPKPLGQR FGKDDLAGPWLNCGTVLQSWLEQNGYPPEDTPDRVLTRDGAIEWRHISKAVSDYLSTADVNKGPVLFLSRHMILNVNTVG LELIKKFGYNLPMIQIDPGTLKPDVKSYGEWLAQPPQDSACFALMLNQSNGEFYPRADLATMESALKASGFQQVKDFPTP RPGQRLGVWKRNAASCNAGFAMK >Mature_583_residues MNKSKILNAGRSDAVVYILFGVLLAFFTYQSVHWLVEYRFGQSLDIDESGYLTLALSFAKAKLNAGWIGWWRALSAPLGF APLAPAVASLAMVVFGVNENYGILCNVGFAVGTLVLLFTVLRRSSLPHALLACILLASMQNFVMFSRSFQFVTATTFFFF AAFACFVFSDGFRRSSYSALLGATLGCMVLSRTMALAFLPAFVLSFLIYLYLARAFSRDTIKNIVLSIVVFLVVAAPWYL RNFETVFGYLFSFGYGAHAAEYGQSRGIFTLANLYLRIRWVLVQMRLPHFVLIVPIFIAGFIFSVFRKARSLGDNLIISG VVLCLGCFFVLSTSQNMGTGFDSPIYTVMIFCVAAWLAKRGLRWLQPVYFALVIVFFSIAAYAHNDVQRCEALPKPLGQR FGKDDLAGPWLNCGTVLQSWLEQNGYPPEDTPDRVLTRDGAIEWRHISKAVSDYLSTADVNKGPVLFLSRHMILNVNTVG LELIKKFGYNLPMIQIDPGTLKPDVKSYGEWLAQPPQDSACFALMLNQSNGEFYPRADLATMESALKASGFQQVKDFPTP RPGQRLGVWKRNAASCNAGFAMK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64846; Mature: 64846
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSKILNAGRSDAVVYILFGVLLAFFTYQSVHWLVEYRFGQSLDIDESGYLTLALSFAK CCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHH AKLNAGWIGWWRALSAPLGFAPLAPAVASLAMVVFGVNENYGILCNVGFAVGTLVLLFTV HHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHH LRRSSLPHALLACILLASMQNFVMFSRSFQFVTATTFFFFAAFACFVFSDGFRRSSYSAL HHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LGATLGCMVLSRTMALAFLPAFVLSFLIYLYLARAFSRDTIKNIVLSIVVFLVVAAPWYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNFETVFGYLFSFGYGAHAAEYGQSRGIFTLANLYLRIRWVLVQMRLPHFVLIVPIFIAG HHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH FIFSVFRKARSLGDNLIISGVVLCLGCFFVLSTSQNMGTGFDSPIYTVMIFCVAAWLAKR HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHC GLRWLQPVYFALVIVFFSIAAYAHNDVQRCEALPKPLGQRFGKDDLAGPWLNCGTVLQSW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHH LEQNGYPPEDTPDRVLTRDGAIEWRHISKAVSDYLSTADVNKGPVLFLSRHMILNVNTVG HHCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECEEEEECHHHH LELIKKFGYNLPMIQIDPGTLKPDVKSYGEWLAQPPQDSACFALMLNQSNGEFYPRADLA HHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHH TMESALKASGFQQVKDFPTPRPGQRLGVWKRNAASCNAGFAMK HHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNKSKILNAGRSDAVVYILFGVLLAFFTYQSVHWLVEYRFGQSLDIDESGYLTLALSFAK CCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHH AKLNAGWIGWWRALSAPLGFAPLAPAVASLAMVVFGVNENYGILCNVGFAVGTLVLLFTV HHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHH LRRSSLPHALLACILLASMQNFVMFSRSFQFVTATTFFFFAAFACFVFSDGFRRSSYSAL HHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LGATLGCMVLSRTMALAFLPAFVLSFLIYLYLARAFSRDTIKNIVLSIVVFLVVAAPWYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNFETVFGYLFSFGYGAHAAEYGQSRGIFTLANLYLRIRWVLVQMRLPHFVLIVPIFIAG HHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH FIFSVFRKARSLGDNLIISGVVLCLGCFFVLSTSQNMGTGFDSPIYTVMIFCVAAWLAKR HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHC GLRWLQPVYFALVIVFFSIAAYAHNDVQRCEALPKPLGQRFGKDDLAGPWLNCGTVLQSW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHH LEQNGYPPEDTPDRVLTRDGAIEWRHISKAVSDYLSTADVNKGPVLFLSRHMILNVNTVG HHCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECEEEEECHHHH LELIKKFGYNLPMIQIDPGTLKPDVKSYGEWLAQPPQDSACFALMLNQSNGEFYPRADLA HHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHH TMESALKASGFQQVKDFPTPRPGQRLGVWKRNAASCNAGFAMK HHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA