| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477027
Identifier: 186477027
GI number: 186477027
Start: 2551180
End: 2552229
Strand: Direct
Name: 186477027
Synonym: Bphy_2276
Alternate gene names: NA
Gene position: 2551180-2552229 (Clockwise)
Preceding gene: 186477026
Following gene: 186477028
Centisome position: 73.33
GC content: 51.81
Gene sequence:
>1050_bases ATGGATACGACGGCTCGAGCAAGAATCGCAATAACTCCGCTTGGCATCGTGGCACTGATTTTGTTTGTCGCGCTTTGCAC GTGGGTCGAGTATGTGTTCTGGGCGAGGGAGCATGCCTCGAACATGGATGAACTGCTCGGAGCCTCGGACGGAGTATTGA GCGGAATGCCTCACTGGCGCGCCTTCCAGAACCGCCTTCTGACTCCCTATCTGATGGATCTCTTCAGGAACGTCTCGCAG AATCCGTACAACGAATTTGCGAAAGTATTCCTGACGCTGGAAAATTTCGTTTTGTGCATTTGCGCCTACGCACTGACCCG AAGAGTCAGCCTCACTATAGTAGCGCTGGTCGCATCGTCGGCGCTGTGGGTGTATTGCATGCACTATTTTAGCTATCCGT GGGACTTCACCGAATCGATGATGCTCACCTTGCTTTTTCTGCTTGCGATCAGAAGCGAAGGCATTTTTCCATTCGTCATT CTGTTTATCCTTTTTGTACTGAGCCGGGAATCCTGCACGTTCATTGGACTATTCCTGATCTTGAGGGGCGTCTCGCCAAT CGCATTCGGTCGGCGGATGGAGGTTCGCTCACTGACGTGGGGCGGCATTCTGATTGTCGTGGGGGTTGCGATCACCGAAG TACTGAGAAAAACACTCTTCAAGGCTTCGATGCTGCCAGGCGTGGGCGCGGATACGTTGCATGAGAAATTTGAAAATCAC TTCCATTACCTTCACAACGGAAAAGTGTTCCTCGTGGGAAGTAAGGGATATGACATCTCGCTCATATACGCGATGCTCAT GCTGGTTTTTCTCGCATGCGCATACGTGGGATATCGCGAAAAGGCAAGAAACCTTCTCGCTATCGGTATCACCATGACGC TGTACACGCTGAGCATTTTCATATTTGGCGTTCTCGATGAGGTGCGGCTATACCAGCCCATGACGGGGATCCTCTCTTTG ACCGTTCTTTATCTGCTATTCGAAACCGGGTCTGGCCAGAAATGGCGCGCCACGAACCTACCGTTCTTGACGCGACGCGG ATGGAGTTGA
Upstream 100 bases:
>100_bases GTCGAGGCACCCCTTCTTCATGAGAGCTAGCGCAGGAAGCGCGTCAAGAGAAATTCTTCTTGCCAATCAGCTTTGATCAA TTTTACTCAGGCGTGGAAAG
Downstream 100 bases:
>100_bases ATGTGAGCGCGACACGAACCCCGCGCACCTGACCGGAAGATGTATTCAGCCCGCCTTGCCTTCGGCGGATGCGTCGACCG GCGCAATAACGTTCTTTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MDTTARARIAITPLGIVALILFVALCTWVEYVFWAREHASNMDELLGASDGVLSGMPHWRAFQNRLLTPYLMDLFRNVSQ NPYNEFAKVFLTLENFVLCICAYALTRRVSLTIVALVASSALWVYCMHYFSYPWDFTESMMLTLLFLLAIRSEGIFPFVI LFILFVLSRESCTFIGLFLILRGVSPIAFGRRMEVRSLTWGGILIVVGVAITEVLRKTLFKASMLPGVGADTLHEKFENH FHYLHNGKVFLVGSKGYDISLIYAMLMLVFLACAYVGYREKARNLLAIGITMTLYTLSIFIFGVLDEVRLYQPMTGILSL TVLYLLFETGSGQKWRATNLPFLTRRGWS
Sequences:
>Translated_349_residues MDTTARARIAITPLGIVALILFVALCTWVEYVFWAREHASNMDELLGASDGVLSGMPHWRAFQNRLLTPYLMDLFRNVSQ NPYNEFAKVFLTLENFVLCICAYALTRRVSLTIVALVASSALWVYCMHYFSYPWDFTESMMLTLLFLLAIRSEGIFPFVI LFILFVLSRESCTFIGLFLILRGVSPIAFGRRMEVRSLTWGGILIVVGVAITEVLRKTLFKASMLPGVGADTLHEKFENH FHYLHNGKVFLVGSKGYDISLIYAMLMLVFLACAYVGYREKARNLLAIGITMTLYTLSIFIFGVLDEVRLYQPMTGILSL TVLYLLFETGSGQKWRATNLPFLTRRGWS >Mature_349_residues MDTTARARIAITPLGIVALILFVALCTWVEYVFWAREHASNMDELLGASDGVLSGMPHWRAFQNRLLTPYLMDLFRNVSQ NPYNEFAKVFLTLENFVLCICAYALTRRVSLTIVALVASSALWVYCMHYFSYPWDFTESMMLTLLFLLAIRSEGIFPFVI LFILFVLSRESCTFIGLFLILRGVSPIAFGRRMEVRSLTWGGILIVVGVAITEVLRKTLFKASMLPGVGADTLHEKFENH FHYLHNGKVFLVGSKGYDISLIYAMLMLVFLACAYVGYREKARNLLAIGITMTLYTLSIFIFGVLDEVRLYQPMTGILSL TVLYLLFETGSGQKWRATNLPFLTRRGWS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39658; Mature: 39658
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTTARARIAITPLGIVALILFVALCTWVEYVFWAREHASNMDELLGASDGVLSGMPHWR CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHCCCCHHH AFQNRLLTPYLMDLFRNVSQNPYNEFAKVFLTLENFVLCICAYALTRRVSLTIVALVASS HHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALWVYCMHYFSYPWDFTESMMLTLLFLLAIRSEGIFPFVILFILFVLSRESCTFIGLFLI HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHH LRGVSPIAFGRRMEVRSLTWGGILIVVGVAITEVLRKTLFKASMLPGVGADTLHEKFENH HHCCCHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FHYLHNGKVFLVGSKGYDISLIYAMLMLVFLACAYVGYREKARNLLAIGITMTLYTLSIF HHEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH IFGVLDEVRLYQPMTGILSLTVLYLLFETGSGQKWRATNLPFLTRRGWS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCC >Mature Secondary Structure MDTTARARIAITPLGIVALILFVALCTWVEYVFWAREHASNMDELLGASDGVLSGMPHWR CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHCCCCHHH AFQNRLLTPYLMDLFRNVSQNPYNEFAKVFLTLENFVLCICAYALTRRVSLTIVALVASS HHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALWVYCMHYFSYPWDFTESMMLTLLFLLAIRSEGIFPFVILFILFVLSRESCTFIGLFLI HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHH LRGVSPIAFGRRMEVRSLTWGGILIVVGVAITEVLRKTLFKASMLPGVGADTLHEKFENH HHCCCHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FHYLHNGKVFLVGSKGYDISLIYAMLMLVFLACAYVGYREKARNLLAIGITMTLYTLSIF HHEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH IFGVLDEVRLYQPMTGILSLTVLYLLFETGSGQKWRATNLPFLTRRGWS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA