| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477000
Identifier: 186477000
GI number: 186477000
Start: 2522302
End: 2523792
Strand: Direct
Name: 186477000
Synonym: Bphy_2249
Alternate gene names: NA
Gene position: 2522302-2523792 (Clockwise)
Preceding gene: 186476999
Following gene: 186477002
Centisome position: 72.5
GC content: 65.59
Gene sequence:
>1491_bases ATGAAAACATGGTTTCCGTGTCGCGCCTCGGCGCGGCCGCTCGTCGTCGCATTGTTCGCGACAAGCGTCGCGCTGACTGC ATGTGGCGGTGGAGGCGGCAACGACAGCGGCCTGGACCCGTCTGTCAGCAATGTTGCACCTAATAAGCCGGCGGGTTCGG CGATCGCGCCTGTGCCGGCGAGTGCAGCGCCGGCAGCGAGTACGCCCGCTGCAGTGACTCCGTCGCCGGCAGTCAGCGCG CCAGCGGCAGTCACTGCGCCTTCGGCAGCCACGCCTGCGAGCGGGACGGGCACGTCGTCAGGCAGCGAGCAGGTGGCAAG CACTGGCGGCAGCAAGCCCGACAACACTGAAACGAACGATCTGCCCGCGTCTCCGCCCGTCGCCATCAACACCGTACCGA TCACGGTCGACAACAAGCTCGACGCCACGATCGTCAATGCGCCCTATGTCAGCGTGACGATCTGCGTGCCGGGCGCACAA GGCCCGACGCAATGCGCGACCCTCGATCACATGTTGCTCGACACAGGCTCGTCAGGCGTACGGGTGATATCGAGCGCCCT CGGCGCCGCGCTCGCCGCACGATTGCCCGCACAAACAGGCGCCGGCAACGATCCGACGGGCAACGCAGCCCTCGCCCAAT GCGCGATTTTCGCGTCGGGCTACACGTGGGGGCCGATAAGGCGCGCGGATGTGAAGATCGGCGGCGAGACGGCGAGCAAC ATCCCGATTCAGGTCATCGGCGACAGCGGATTCACGTGGACGCCGAATGACTGCACCGCACATGGCGCGTCCAGCATGAA TGACGTCAAGACGTTGGGCGCGAAAGGGATCGTCGGCATCGGCCATCTGGCGCACGACTTCCCGCAGGCGGCACAAACAG CGCTCGCGGCCACGTACTACTACTGCCCGACGCCCTGGTCGTGCACCGCCGCGAGCGTGCCGCTCGACAGGCAGACGGCC AATCCCGTCGCCGCCTTCGCGACCGACAACAACGGCACGGTCATCCGCCTGCCCGCACTACCTGCAACGGGCGAGGCAAG CGTCACGGGCAAACTGCTGTTCGGCATCGGCACACGCGACAACAACACGTTGCCGTCGAGCGCTACGCGCCTCACCGTGA CAGACCGAGGGTTGTTCACAACGAACTACAAGGGGCGCACGCTATCGAGCGTCATCGATAGCGGCTCGAACGGACTGTTC TTCGCTGATTCGACGCTGCCCGTCTTCGGAGGCTGGTACGCGCCGCCCGCCGCGCAAACGCTGAGCGCGTCGATGCTATC GAATACGGGCAATGCGCAATCGACGGCCTCGTTTGCGATCGCCGATTCGTCGAGCCTCTTCGAGCTCGGCTATGCGGCGC ACGACAATCTCGGCGCACCGCTGAACAGCATGTTCATGTGGGGCTTGCCGTTCTTCTATGGGCGCAGCGTATATACGGCG CTGAGCGGCGTGCAGGCGGGACCGCAGACAGGCCCCTACGTGGCGTTCTGA
Upstream 100 bases:
>100_bases GCGACCTGCAGATCGAGTCCGTCGGACATCAGGGTGCCTTCGCAGGCCGCGCCTGCGTACCGCGGCTCGTGCCCGCCAAC GTCAACGTGGATGCGTTGCA
Downstream 100 bases:
>100_bases TCGACAGCGCATCATTCGATGCGCCAGCAACCAACGGCGGATCGGCGTGCAAGCCATCCGCCGTTTTTCATTGCATACCC CGCGCCCGTGCACAACAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MKTWFPCRASARPLVVALFATSVALTACGGGGGNDSGLDPSVSNVAPNKPAGSAIAPVPASAAPAASTPAAVTPSPAVSA PAAVTAPSAATPASGTGTSSGSEQVASTGGSKPDNTETNDLPASPPVAINTVPITVDNKLDATIVNAPYVSVTICVPGAQ GPTQCATLDHMLLDTGSSGVRVISSALGAALAARLPAQTGAGNDPTGNAALAQCAIFASGYTWGPIRRADVKIGGETASN IPIQVIGDSGFTWTPNDCTAHGASSMNDVKTLGAKGIVGIGHLAHDFPQAAQTALAATYYYCPTPWSCTAASVPLDRQTA NPVAAFATDNNGTVIRLPALPATGEASVTGKLLFGIGTRDNNTLPSSATRLTVTDRGLFTTNYKGRTLSSVIDSGSNGLF FADSTLPVFGGWYAPPAAQTLSASMLSNTGNAQSTASFAIADSSSLFELGYAAHDNLGAPLNSMFMWGLPFFYGRSVYTA LSGVQAGPQTGPYVAF
Sequences:
>Translated_496_residues MKTWFPCRASARPLVVALFATSVALTACGGGGGNDSGLDPSVSNVAPNKPAGSAIAPVPASAAPAASTPAAVTPSPAVSA PAAVTAPSAATPASGTGTSSGSEQVASTGGSKPDNTETNDLPASPPVAINTVPITVDNKLDATIVNAPYVSVTICVPGAQ GPTQCATLDHMLLDTGSSGVRVISSALGAALAARLPAQTGAGNDPTGNAALAQCAIFASGYTWGPIRRADVKIGGETASN IPIQVIGDSGFTWTPNDCTAHGASSMNDVKTLGAKGIVGIGHLAHDFPQAAQTALAATYYYCPTPWSCTAASVPLDRQTA NPVAAFATDNNGTVIRLPALPATGEASVTGKLLFGIGTRDNNTLPSSATRLTVTDRGLFTTNYKGRTLSSVIDSGSNGLF FADSTLPVFGGWYAPPAAQTLSASMLSNTGNAQSTASFAIADSSSLFELGYAAHDNLGAPLNSMFMWGLPFFYGRSVYTA LSGVQAGPQTGPYVAF >Mature_496_residues MKTWFPCRASARPLVVALFATSVALTACGGGGGNDSGLDPSVSNVAPNKPAGSAIAPVPASAAPAASTPAAVTPSPAVSA PAAVTAPSAATPASGTGTSSGSEQVASTGGSKPDNTETNDLPASPPVAINTVPITVDNKLDATIVNAPYVSVTICVPGAQ GPTQCATLDHMLLDTGSSGVRVISSALGAALAARLPAQTGAGNDPTGNAALAQCAIFASGYTWGPIRRADVKIGGETASN IPIQVIGDSGFTWTPNDCTAHGASSMNDVKTLGAKGIVGIGHLAHDFPQAAQTALAATYYYCPTPWSCTAASVPLDRQTA NPVAAFATDNNGTVIRLPALPATGEASVTGKLLFGIGTRDNNTLPSSATRLTVTDRGLFTTNYKGRTLSSVIDSGSNGLF FADSTLPVFGGWYAPPAAQTLSASMLSNTGNAQSTASFAIADSSSLFELGYAAHDNLGAPLNSMFMWGLPFFYGRSVYTA LSGVQAGPQTGPYVAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49705; Mature: 49705
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTWFPCRASARPLVVALFATSVALTACGGGGGNDSGLDPSVSNVAPNKPAGSAIAPVPA CCCCCCCCCCCCCEEEEEEHHHHEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC SAAPAASTPAAVTPSPAVSAPAAVTAPSAATPASGTGTSSGSEQVASTGGSKPDNTETND CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC LPASPPVAINTVPITVDNKLDATIVNAPYVSVTICVPGAQGPTQCATLDHMLLDTGSSGV CCCCCCEEEEEEEEEECCCCCEEEEECCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCHH RVISSALGAALAARLPAQTGAGNDPTGNAALAQCAIFASGYTWGPIRRADVKIGGETASN HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHEEEECCCCCCCEEEEEEEECCCCCCC IPIQVIGDSGFTWTPNDCTAHGASSMNDVKTLGAKGIVGIGHLAHDFPQAAQTALAATYY CCEEEECCCCCEECCCCCCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHEEEE YCPTPWSCTAASVPLDRQTANPVAAFATDNNGTVIRLPALPATGEASVTGKLLFGIGTRD ECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEEEEECCCC NNTLPSSATRLTVTDRGLFTTNYKGRTLSSVIDSGSNGLFFADSTLPVFGGWYAPPAAQT CCCCCCCCEEEEEECCCEEEECCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHH LSASMLSNTGNAQSTASFAIADSSSLFELGYAAHDNLGAPLNSMFMWGLPFFYGRSVYTA HHHHHHHCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHH LSGVQAGPQTGPYVAF HHCCCCCCCCCCCCCC >Mature Secondary Structure MKTWFPCRASARPLVVALFATSVALTACGGGGGNDSGLDPSVSNVAPNKPAGSAIAPVPA CCCCCCCCCCCCCEEEEEEHHHHEEEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC SAAPAASTPAAVTPSPAVSAPAAVTAPSAATPASGTGTSSGSEQVASTGGSKPDNTETND CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC LPASPPVAINTVPITVDNKLDATIVNAPYVSVTICVPGAQGPTQCATLDHMLLDTGSSGV CCCCCCEEEEEEEEEECCCCCEEEEECCEEEEEEEECCCCCCCHHHHHHHHHCCCCCCHH RVISSALGAALAARLPAQTGAGNDPTGNAALAQCAIFASGYTWGPIRRADVKIGGETASN HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHEEEECCCCCCCEEEEEEEECCCCCCC IPIQVIGDSGFTWTPNDCTAHGASSMNDVKTLGAKGIVGIGHLAHDFPQAAQTALAATYY CCEEEECCCCCEECCCCCCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHEEEE YCPTPWSCTAASVPLDRQTANPVAAFATDNNGTVIRLPALPATGEASVTGKLLFGIGTRD ECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEEEEECCCC NNTLPSSATRLTVTDRGLFTTNYKGRTLSSVIDSGSNGLFFADSTLPVFGGWYAPPAAQT CCCCCCCCEEEEEECCCEEEECCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHH LSASMLSNTGNAQSTASFAIADSSSLFELGYAAHDNLGAPLNSMFMWGLPFFYGRSVYTA HHHHHHHCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHH LSGVQAGPQTGPYVAF HHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA