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The map label for this gene is ydgJ [C]

Identifier: 186476991

GI number: 186476991

Start: 2513261

End: 2514406

Strand: Reverse

Name: ydgJ [C]

Synonym: Bphy_2240

Alternate gene names: 186476991

Gene position: 2514406-2513261 (Counterclockwise)

Preceding gene: 186476992

Following gene: 186476989

Centisome position: 72.27

GC content: 66.67

Gene sequence:

>1146_bases
ATGAAACGAAGACTCAGGCTGGGCATGGTCGGCGGCGGTCAGGGGGCGTTCATCGGTGCGGTGCACCGAATCGCGGCGCG
CATCGACGATCGCTTCGAGCTGGTGGCGGCCGCGTTGTCGTCCGACCCTCAGCGTGCGCACGCCAGCGCCGACGAGATCG
GCGTCGCGCGCAGCTACGCGAGCTGGGACGAGATGGCCCGCGCCGAAGCCGCACGCGACGACGGCATCGACGCGGTGTCG
ATCGTCACGCCCAACCATTTGCATGCGCCCGTGGCGACGGCATTCCTCAATGCCGGCATCCACGTGATCTGCGACAAGCC
GCTGGCAATGACGCTCGAAGAGGGCGAAGCGCTCGCGCAACTCGCGCGCGACAAGAAGCGGCTCTTTGCTCTGACGCATA
CCTACTCCGGCTATCCGATGGCGCGCCATGCGCGCGAACTCGTCGAGGCGGGCGAGATCGGCGAGGTGCGCGTCGTGCAG
GTCGAATATGCGCAGGACTGGCTCGCGAAGCCGATTGAACTCGCGGGCGACAACCGCCAGGCGGCATGGCGCACCGATCC
GAAGCAGGCAGGGCGCGCGGGGTGTCTCGGCGACATCGGCACGCATGCCTACCACCTCGCCGCGTTTGCGACGGGCATGC
TGCCCATTGAGATTGCCGCCGAATTGCATACGTTCGTCGCGGGCCGTCAGGTCGACGACCATATTCAGGCGATGCTGCGC
TATGAGAACGGCGCGCGCGGCATGTTGTGGGCGAGCCAGGTCGCGAGCGGCGCGGAAAACGCGCTGCGTTTGCGTGTCCA
TGGGACGAAAGCGGGCATCGCGTTCGATCAGGAGAACCCGAACGAACTGCTGTTCACGCCGTTGGGCGGCGCGACGCAAC
GGCTCACGCGCGGGCGCGTCGACAGCGCGGTCGCGCGAGATGCGACGCGCGTGCCGCCAGGGCATCCCGAAGGGTATCTC
GAAGCGTTCGCGCAGCTTTACAAGGACGCGGCGCGGCAGATCGAAGCGATCGACGCGGGCGTACCCGTGCCGCCCGAAAG
CCGTTTGCTGACGACCGTCGATGACGGCGTCGCAGGTCTGCGTTTCATCGATGCCGTCTTCGAAAGCCACGCAACGCTTG
TGTATTCACGCGTGAAGAACGGCTGA

Upstream 100 bases:

>100_bases
AATTGAAACGCGTGCTCGGGCTCTGAGGCGCGCAGCCGAACACGTCCAGCGCGTCCAGCACGTTCAACAGGTTCAGCACG
TCGAACAGGAGCAGATCGCA

Downstream 100 bases:

>100_bases
CGCCCGCGCACGGATTCAGCGCTTGCTGCGTCTGATCTGTTCTTCGAATGCCAGGTCGAGCTTGCTGGCCTTGCGCGGCT
TTTTCGGGCCGTAGTCGTCG

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MKRRLRLGMVGGGQGAFIGAVHRIAARIDDRFELVAAALSSDPQRAHASADEIGVARSYASWDEMARAEAARDDGIDAVS
IVTPNHLHAPVATAFLNAGIHVICDKPLAMTLEEGEALAQLARDKKRLFALTHTYSGYPMARHARELVEAGEIGEVRVVQ
VEYAQDWLAKPIELAGDNRQAAWRTDPKQAGRAGCLGDIGTHAYHLAAFATGMLPIEIAAELHTFVAGRQVDDHIQAMLR
YENGARGMLWASQVASGAENALRLRVHGTKAGIAFDQENPNELLFTPLGGATQRLTRGRVDSAVARDATRVPPGHPEGYL
EAFAQLYKDAARQIEAIDAGVPVPPESRLLTTVDDGVAGLRFIDAVFESHATLVYSRVKNG

Sequences:

>Translated_381_residues
MKRRLRLGMVGGGQGAFIGAVHRIAARIDDRFELVAAALSSDPQRAHASADEIGVARSYASWDEMARAEAARDDGIDAVS
IVTPNHLHAPVATAFLNAGIHVICDKPLAMTLEEGEALAQLARDKKRLFALTHTYSGYPMARHARELVEAGEIGEVRVVQ
VEYAQDWLAKPIELAGDNRQAAWRTDPKQAGRAGCLGDIGTHAYHLAAFATGMLPIEIAAELHTFVAGRQVDDHIQAMLR
YENGARGMLWASQVASGAENALRLRVHGTKAGIAFDQENPNELLFTPLGGATQRLTRGRVDSAVARDATRVPPGHPEGYL
EAFAQLYKDAARQIEAIDAGVPVPPESRLLTTVDDGVAGLRFIDAVFESHATLVYSRVKNG
>Mature_381_residues
MKRRLRLGMVGGGQGAFIGAVHRIAARIDDRFELVAAALSSDPQRAHASADEIGVARSYASWDEMARAEAARDDGIDAVS
IVTPNHLHAPVATAFLNAGIHVICDKPLAMTLEEGEALAQLARDKKRLFALTHTYSGYPMARHARELVEAGEIGEVRVVQ
VEYAQDWLAKPIELAGDNRQAAWRTDPKQAGRAGCLGDIGTHAYHLAAFATGMLPIEIAAELHTFVAGRQVDDHIQAMLR
YENGARGMLWASQVASGAENALRLRVHGTKAGIAFDQENPNELLFTPLGGATQRLTRGRVDSAVARDATRVPPGHPEGYL
EAFAQLYKDAARQIEAIDAGVPVPPESRLLTTVDDGVAGLRFIDAVFESHATLVYSRVKNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=283, Percent_Identity=25.4416961130742, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787574, Length=263, Percent_Identity=28.1368821292776, Blast_Score=66, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24581117, Length=288, Percent_Identity=26.3888888888889, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24581115, Length=233, Percent_Identity=26.6094420600858, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 41087; Mature: 41087

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRLRLGMVGGGQGAFIGAVHRIAARIDDRFELVAAALSSDPQRAHASADEIGVARSYA
CCCCEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHH
SWDEMARAEAARDDGIDAVSIVTPNHLHAPVATAFLNAGIHVICDKPLAMTLEEGEALAQ
HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCEEEEECCCCEEEEHHHHHHHH
LARDKKRLFALTHTYSGYPMARHARELVEAGEIGEVRVVQVEYAQDWLAKPIELAGDNRQ
HHHHHHHEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEHHHHHHCCCHHHCCCCCC
AAWRTDPKQAGRAGCLGDIGTHAYHLAAFATGMLPIEIAAELHTFVAGRQVDDHIQAMLR
CCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
YENGARGMLWASQVASGAENALRLRVHGTKAGIAFDQENPNELLFTPLGGATQRLTRGRV
HCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCEEECCCCCCCEEEECCCCHHHHHHHCCH
DSAVARDATRVPPGHPEGYLEAFAQLYKDAARQIEAIDAGVPVPPESRLLTTVDDGVAGL
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHH
RFIDAVFESHATLVYSRVKNG
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRRLRLGMVGGGQGAFIGAVHRIAARIDDRFELVAAALSSDPQRAHASADEIGVARSYA
CCCCEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHH
SWDEMARAEAARDDGIDAVSIVTPNHLHAPVATAFLNAGIHVICDKPLAMTLEEGEALAQ
HHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCEEEEECCCCEEEEHHHHHHHH
LARDKKRLFALTHTYSGYPMARHARELVEAGEIGEVRVVQVEYAQDWLAKPIELAGDNRQ
HHHHHHHEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEEHHHHHHCCCHHHCCCCCC
AAWRTDPKQAGRAGCLGDIGTHAYHLAAFATGMLPIEIAAELHTFVAGRQVDDHIQAMLR
CCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
YENGARGMLWASQVASGAENALRLRVHGTKAGIAFDQENPNELLFTPLGGATQRLTRGRV
HCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCEEECCCCCCCEEEECCCCHHHHHHHCCH
DSAVARDATRVPPGHPEGYLEAFAQLYKDAARQIEAIDAGVPVPPESRLLTTVDDGVAGL
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHH
RFIDAVFESHATLVYSRVKNG
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]