| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476974
Identifier: 186476974
GI number: 186476974
Start: 2495918
End: 2496688
Strand: Reverse
Name: 186476974
Synonym: Bphy_2223
Alternate gene names: NA
Gene position: 2496688-2495918 (Counterclockwise)
Preceding gene: 186476975
Following gene: 186476971
Centisome position: 71.76
GC content: 66.41
Gene sequence:
>771_bases GTGTCCCAATCCTCCGATCCTTCCGACCAAGACATCCCTCTTCTGACCGACGTGATGGAGACGGGTCACGACCCGCACGC AAAGACAAAGCGCCCCAAGCGCAGCGGCTCGCATGAGCATGCGGGTTCGCATGCGCGCAAGCATCGGGCGACGCATGACG GTGCCAGTGCCCATGAAGCGGCAGATGAAGCGGCAGATGAAGCGGCACAGGAAGCGGCTCGCGACGAGTACGACGCGCCG CACGAATCCGCTCCGCATCCATCGCCTTCGCCGCGAGTGGAAGCGGCAGCGCCGCCCGCCGACGATGACGACGTGCCCCT GCTGGATTCCGTCTACGAGTCTCCCGAAGTGCTGAGCGGCCGTGCGCTGCAGCCCGAGCGCGAAGCGCCGCAGGCGCTGG CGCGCGAGCCCGCGCAGTTCGTGCCGGGCGAAGCGGAATTCACGTCGGGCTCAACGGCTGAGCGCTATGTCCCGCCGCCC GTTGCGGACCTGGCGCAGGCTCAGGCGCACCACGCGAGTACCCCGGCCGCCACGACTGACTACGACGCCGACCTGTTGGC CGAGCGTCTGCGCGGCCGTTTCGCGACGTATCTGAATGGGGATGGAAGGAATCTGATTGAAGCACGGTGCCGTGACGCGT TCCAAGATCACACGACCTGGCTCGTCAACCAGATCACGCGCGAAGTCGCGCTCGCGCTGGAAACGGAGATGCTGCGCTGG GTTCGCGAGGCGATCCGCGAAGAACTCGGCAACTCGGCGACGGGTAAGTAA
Upstream 100 bases:
>100_bases CGCCTGACCGGTTCCTGTCCGCTCGGTGCGCGGTCTTGTCCCGCATTCTTGTCCGATAGGCGCAGATCCGGCGCGTCCGA TCTTTAAAGGGAGAGTTTTC
Downstream 100 bases:
>100_bases ACCGCAACCGGTTACTTGAGCGTCAGGATCCAGCTTGCGAGCGAGGTGGCCTCGTCCGCCGTGAGCTGGGTGTTCGCGGG CATCGGCACGGGTCCCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSQSSDPSDQDIPLLTDVMETGHDPHAKTKRPKRSGSHEHAGSHARKHRATHDGASAHEAADEAADEAAQEAARDEYDAP HESAPHPSPSPRVEAAAPPADDDDVPLLDSVYESPEVLSGRALQPEREAPQALAREPAQFVPGEAEFTSGSTAERYVPPP VADLAQAQAHHASTPAATTDYDADLLAERLRGRFATYLNGDGRNLIEARCRDAFQDHTTWLVNQITREVALALETEMLRW VREAIREELGNSATGK
Sequences:
>Translated_256_residues MSQSSDPSDQDIPLLTDVMETGHDPHAKTKRPKRSGSHEHAGSHARKHRATHDGASAHEAADEAADEAAQEAARDEYDAP HESAPHPSPSPRVEAAAPPADDDDVPLLDSVYESPEVLSGRALQPEREAPQALAREPAQFVPGEAEFTSGSTAERYVPPP VADLAQAQAHHASTPAATTDYDADLLAERLRGRFATYLNGDGRNLIEARCRDAFQDHTTWLVNQITREVALALETEMLRW VREAIREELGNSATGK >Mature_255_residues SQSSDPSDQDIPLLTDVMETGHDPHAKTKRPKRSGSHEHAGSHARKHRATHDGASAHEAADEAADEAAQEAARDEYDAPH ESAPHPSPSPRVEAAAPPADDDDVPLLDSVYESPEVLSGRALQPEREAPQALAREPAQFVPGEAEFTSGSTAERYVPPPV ADLAQAQAHHASTPAATTDYDADLLAERLRGRFATYLNGDGRNLIEARCRDAFQDHTTWLVNQITREVALALETEMLRWV REAIREELGNSATGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27781; Mature: 27650
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSSDPSDQDIPLLTDVMETGHDPHAKTKRPKRSGSHEHAGSHARKHRATHDGASAHEA CCCCCCCCCCCCHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHH ADEAADEAAQEAARDEYDAPHESAPHPSPSPRVEAAAPPADDDDVPLLDSVYESPEVLSG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHCC RALQPEREAPQALAREPAQFVPGEAEFTSGSTAERYVPPPVADLAQAQAHHASTPAATTD CCCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC YDADLLAERLRGRFATYLNGDGRNLIEARCRDAFQDHTTWLVNQITREVALALETEMLRW CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VREAIREELGNSATGK HHHHHHHHHCCCCCCC >Mature Secondary Structure SQSSDPSDQDIPLLTDVMETGHDPHAKTKRPKRSGSHEHAGSHARKHRATHDGASAHEA CCCCCCCCCCCHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHH ADEAADEAAQEAARDEYDAPHESAPHPSPSPRVEAAAPPADDDDVPLLDSVYESPEVLSG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHCC RALQPEREAPQALAREPAQFVPGEAEFTSGSTAERYVPPPVADLAQAQAHHASTPAATTD CCCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC YDADLLAERLRGRFATYLNGDGRNLIEARCRDAFQDHTTWLVNQITREVALALETEMLRW CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VREAIREELGNSATGK HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA