Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is 186476974

Identifier: 186476974

GI number: 186476974

Start: 2495918

End: 2496688

Strand: Reverse

Name: 186476974

Synonym: Bphy_2223

Alternate gene names: NA

Gene position: 2496688-2495918 (Counterclockwise)

Preceding gene: 186476975

Following gene: 186476971

Centisome position: 71.76

GC content: 66.41

Gene sequence:

>771_bases
GTGTCCCAATCCTCCGATCCTTCCGACCAAGACATCCCTCTTCTGACCGACGTGATGGAGACGGGTCACGACCCGCACGC
AAAGACAAAGCGCCCCAAGCGCAGCGGCTCGCATGAGCATGCGGGTTCGCATGCGCGCAAGCATCGGGCGACGCATGACG
GTGCCAGTGCCCATGAAGCGGCAGATGAAGCGGCAGATGAAGCGGCACAGGAAGCGGCTCGCGACGAGTACGACGCGCCG
CACGAATCCGCTCCGCATCCATCGCCTTCGCCGCGAGTGGAAGCGGCAGCGCCGCCCGCCGACGATGACGACGTGCCCCT
GCTGGATTCCGTCTACGAGTCTCCCGAAGTGCTGAGCGGCCGTGCGCTGCAGCCCGAGCGCGAAGCGCCGCAGGCGCTGG
CGCGCGAGCCCGCGCAGTTCGTGCCGGGCGAAGCGGAATTCACGTCGGGCTCAACGGCTGAGCGCTATGTCCCGCCGCCC
GTTGCGGACCTGGCGCAGGCTCAGGCGCACCACGCGAGTACCCCGGCCGCCACGACTGACTACGACGCCGACCTGTTGGC
CGAGCGTCTGCGCGGCCGTTTCGCGACGTATCTGAATGGGGATGGAAGGAATCTGATTGAAGCACGGTGCCGTGACGCGT
TCCAAGATCACACGACCTGGCTCGTCAACCAGATCACGCGCGAAGTCGCGCTCGCGCTGGAAACGGAGATGCTGCGCTGG
GTTCGCGAGGCGATCCGCGAAGAACTCGGCAACTCGGCGACGGGTAAGTAA

Upstream 100 bases:

>100_bases
CGCCTGACCGGTTCCTGTCCGCTCGGTGCGCGGTCTTGTCCCGCATTCTTGTCCGATAGGCGCAGATCCGGCGCGTCCGA
TCTTTAAAGGGAGAGTTTTC

Downstream 100 bases:

>100_bases
ACCGCAACCGGTTACTTGAGCGTCAGGATCCAGCTTGCGAGCGAGGTGGCCTCGTCCGCCGTGAGCTGGGTGTTCGCGGG
CATCGGCACGGGTCCCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MSQSSDPSDQDIPLLTDVMETGHDPHAKTKRPKRSGSHEHAGSHARKHRATHDGASAHEAADEAADEAAQEAARDEYDAP
HESAPHPSPSPRVEAAAPPADDDDVPLLDSVYESPEVLSGRALQPEREAPQALAREPAQFVPGEAEFTSGSTAERYVPPP
VADLAQAQAHHASTPAATTDYDADLLAERLRGRFATYLNGDGRNLIEARCRDAFQDHTTWLVNQITREVALALETEMLRW
VREAIREELGNSATGK

Sequences:

>Translated_256_residues
MSQSSDPSDQDIPLLTDVMETGHDPHAKTKRPKRSGSHEHAGSHARKHRATHDGASAHEAADEAADEAAQEAARDEYDAP
HESAPHPSPSPRVEAAAPPADDDDVPLLDSVYESPEVLSGRALQPEREAPQALAREPAQFVPGEAEFTSGSTAERYVPPP
VADLAQAQAHHASTPAATTDYDADLLAERLRGRFATYLNGDGRNLIEARCRDAFQDHTTWLVNQITREVALALETEMLRW
VREAIREELGNSATGK
>Mature_255_residues
SQSSDPSDQDIPLLTDVMETGHDPHAKTKRPKRSGSHEHAGSHARKHRATHDGASAHEAADEAADEAAQEAARDEYDAPH
ESAPHPSPSPRVEAAAPPADDDDVPLLDSVYESPEVLSGRALQPEREAPQALAREPAQFVPGEAEFTSGSTAERYVPPPV
ADLAQAQAHHASTPAATTDYDADLLAERLRGRFATYLNGDGRNLIEARCRDAFQDHTTWLVNQITREVALALETEMLRWV
REAIREELGNSATGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27781; Mature: 27650

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSSDPSDQDIPLLTDVMETGHDPHAKTKRPKRSGSHEHAGSHARKHRATHDGASAHEA
CCCCCCCCCCCCHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHH
ADEAADEAAQEAARDEYDAPHESAPHPSPSPRVEAAAPPADDDDVPLLDSVYESPEVLSG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHCC
RALQPEREAPQALAREPAQFVPGEAEFTSGSTAERYVPPPVADLAQAQAHHASTPAATTD
CCCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
YDADLLAERLRGRFATYLNGDGRNLIEARCRDAFQDHTTWLVNQITREVALALETEMLRW
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VREAIREELGNSATGK
HHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SQSSDPSDQDIPLLTDVMETGHDPHAKTKRPKRSGSHEHAGSHARKHRATHDGASAHEA
CCCCCCCCCCCHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHH
ADEAADEAAQEAARDEYDAPHESAPHPSPSPRVEAAAPPADDDDVPLLDSVYESPEVLSG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHCC
RALQPEREAPQALAREPAQFVPGEAEFTSGSTAERYVPPPVADLAQAQAHHASTPAATTD
CCCCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
YDADLLAERLRGRFATYLNGDGRNLIEARCRDAFQDHTTWLVNQITREVALALETEMLRW
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VREAIREELGNSATGK
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA