| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is lgt
Identifier: 186476970
GI number: 186476970
Start: 2491633
End: 2492538
Strand: Reverse
Name: lgt
Synonym: Bphy_2219
Alternate gene names: 186476970
Gene position: 2492538-2491633 (Counterclockwise)
Preceding gene: 186476971
Following gene: 186476964
Centisome position: 71.64
GC content: 62.25
Gene sequence:
>906_bases ATGCACATCCATCCGAATTTCGATCCCGTCGCCATCCATCTGGGGCCGCTCGCTGTCCGCTGGTACGGCCTGATGTATCT GGTCGCCTTCATCATGGCAATTGTCGTGGGCCGGCTGCGGCTACGTCTGCCGCATGTCGCCGCACAAGGCTGGACGCCGA AGGACATCGACGACATGTTGTTTTACGGCGTGCTCGGCACGATCCTCGGCGGGCGTTTTGGCTACGTGCTGTTCTACAAG GCGAGTTGGTACTTTGCGCATCCTCTCGACGTCTTCAAGGTCTGGGAAGGCGGCATGTCGTTTCACGGCGGCTTTCTCGG CGTGACGTTCGCGATGATCCTGTTTGCATGGCAGCGAAAGCGCACGTGGTTGCAGGTGACGGACTTCGTCGCGCCGATGG TGCCGGCGGGTCTTGCGGCGGGGCGCCTCGGCAACTTCATCAATGGCGAGTTGTGGGGGCGTGTGACTTCGCCCGATGCG CCGTGGGCGATGCTGTTCCCGGGCGCCGCGAACGAAGACGCGGGCTGGCTCGTTACGCATCCGGCGCAGGCTGCGCAATG GCATCTCGCCGATGTGTTCGCGCAATATCACATGCTGCCGCGCCATCCGTCGCAACTGTACGAGATTGCCCTCGAGGGCG TCGTGCTGTTCCTTGTGCTTTGGTTGTTTTCGCGCAAGCCGCGGCCTGTTGGTGCTGCTTCGGCGGTGTTTCTGATCGGG TATGGGCTTGCGCGGTTTACCGTTGAGTTCGCTCGGGAGCCGGACGATTTTCTTGGGCTGCTGGCGCTAGGCTTGTCGAT GGGGCAGTGGCTTTCGCTGCCGATGATCATTGCTGGTGTCGTGATGTTGTTGTGGGCGTATCGGAGGAATGGGCGCTCGG CGGCCCAGGCGGCCGGGGTTAGCTGA
Upstream 100 bases:
>100_bases CGTGCGCATGCCGATGCACTCGCCAGCTAGAGAACGCTTTGCCGTGGCAAGCGTCCAATGCGCTTGAGTCCCGGATTTCC CGAACCCCTATAACGATACG
Downstream 100 bases:
>100_bases GGTTTTTGTCTGCGAGCCAGTCGCCATTCTGGTTTTTGCTTTCGCTGGCATCCAGCGAAAGCAAAAACCCAGAAAAAGCC ACAAGACAGCAGCCTCACTT
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MHIHPNFDPVAIHLGPLAVRWYGLMYLVAFIMAIVVGRLRLRLPHVAAQGWTPKDIDDMLFYGVLGTILGGRFGYVLFYK ASWYFAHPLDVFKVWEGGMSFHGGFLGVTFAMILFAWQRKRTWLQVTDFVAPMVPAGLAAGRLGNFINGELWGRVTSPDA PWAMLFPGAANEDAGWLVTHPAQAAQWHLADVFAQYHMLPRHPSQLYEIALEGVVLFLVLWLFSRKPRPVGAASAVFLIG YGLARFTVEFAREPDDFLGLLALGLSMGQWLSLPMIIAGVVMLLWAYRRNGRSAAQAAGVS
Sequences:
>Translated_301_residues MHIHPNFDPVAIHLGPLAVRWYGLMYLVAFIMAIVVGRLRLRLPHVAAQGWTPKDIDDMLFYGVLGTILGGRFGYVLFYK ASWYFAHPLDVFKVWEGGMSFHGGFLGVTFAMILFAWQRKRTWLQVTDFVAPMVPAGLAAGRLGNFINGELWGRVTSPDA PWAMLFPGAANEDAGWLVTHPAQAAQWHLADVFAQYHMLPRHPSQLYEIALEGVVLFLVLWLFSRKPRPVGAASAVFLIG YGLARFTVEFAREPDDFLGLLALGLSMGQWLSLPMIIAGVVMLLWAYRRNGRSAAQAAGVS >Mature_301_residues MHIHPNFDPVAIHLGPLAVRWYGLMYLVAFIMAIVVGRLRLRLPHVAAQGWTPKDIDDMLFYGVLGTILGGRFGYVLFYK ASWYFAHPLDVFKVWEGGMSFHGGFLGVTFAMILFAWQRKRTWLQVTDFVAPMVPAGLAAGRLGNFINGELWGRVTSPDA PWAMLFPGAANEDAGWLVTHPAQAAQWHLADVFAQYHMLPRHPSQLYEIALEGVVLFLVLWLFSRKPRPVGAASAVFLIG YGLARFTVEFAREPDDFLGLLALGLSMGQWLSLPMIIAGVVMLLWAYRRNGRSAAQAAGVS
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family
Homologues:
Organism=Escherichia coli, GI1789192, Length=287, Percent_Identity=56.4459930313589, Blast_Score=313, Evalue=7e-87,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LGT_BURP8 (B2JES9)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001858440.1 - GeneID: 6243705 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_2219 - HOGENOM: HBG450278 - OMA: NGELYGK - ProtClustDB: PRK00052 - HAMAP: MF_01147 - InterPro: IPR001640 - TIGRFAMs: TIGR00544
Pfam domain/function: PF01790 LGT
EC number: 2.4.99.- [C]
Molecular weight: Translated: 33472; Mature: 33472
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1d9b2530)-; HASH(0x1f5d1f14)-; HASH(0x1f979a58)-; HASH(0x1f910f48)-; HASH(0x1e616254)-; HASH(0x1f8cd6f8)-; HASH(0x1f1475a0)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIHPNFDPVAIHLGPLAVRWYGLMYLVAFIMAIVVGRLRLRLPHVAAQGWTPKDIDDML CCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHH FYGVLGTILGGRFGYVLFYKASWYFAHPLDVFKVWEGGMSFHGGFLGVTFAMILFAWQRK HHHHHHHHHCCCCCEEEEEECCEEEECHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC RTWLQVTDFVAPMVPAGLAAGRLGNFINGELWGRVTSPDAPWAMLFPGAANEDAGWLVTH CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCEECCCCCCEEEEECCCCCCCCCEEEEC PAQAAQWHLADVFAQYHMLPRHPSQLYEIALEGVVLFLVLWLFSRKPRPVGAASAVFLIG CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH YGLARFTVEFAREPDDFLGLLALGLSMGQWLSLPMIIAGVVMLLWAYRRNGRSAAQAAGV HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC S H >Mature Secondary Structure MHIHPNFDPVAIHLGPLAVRWYGLMYLVAFIMAIVVGRLRLRLPHVAAQGWTPKDIDDML CCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHH FYGVLGTILGGRFGYVLFYKASWYFAHPLDVFKVWEGGMSFHGGFLGVTFAMILFAWQRK HHHHHHHHHCCCCCEEEEEECCEEEECHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC RTWLQVTDFVAPMVPAGLAAGRLGNFINGELWGRVTSPDAPWAMLFPGAANEDAGWLVTH CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCEECCCCCCEEEEECCCCCCCCCEEEEC PAQAAQWHLADVFAQYHMLPRHPSQLYEIALEGVVLFLVLWLFSRKPRPVGAASAVFLIG CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH YGLARFTVEFAREPDDFLGLLALGLSMGQWLSLPMIIAGVVMLLWAYRRNGRSAAQAAGV HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC S H
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA