| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is cobP [H]
Identifier: 186476955
GI number: 186476955
Start: 2478824
End: 2479372
Strand: Direct
Name: cobP [H]
Synonym: Bphy_2204
Alternate gene names: 186476955
Gene position: 2478824-2479372 (Clockwise)
Preceding gene: 186476952
Following gene: 186476956
Centisome position: 71.25
GC content: 67.4
Gene sequence:
>549_bases ATGATTTCCCGCGACCTCACCTTCGTCCTCGGCGGCGCGCGCTCGGGCAAGAGCCTGCATGCCGAACAACTCGCAAGCAC GAGCGCATGGCCCGTGACCTATGTTGCGACCGCACGCATCGGCGACGACGAATTCGCCGCACGCGTCGCGCGTCATCGCG AGCGGCGGCCCGCGAATTGGGCGCTGCTCGAAGCGCCGCTCGATCTGCCGCAAGCCACCGCATCGATCGACCGTTCGGAG CACTGCATTCTGATCGACTGCCTGACGCTGTGGCTCGCGAACCTGCTCTGCCCTGCCGACGGCTCGCCGCCGCTTGCCGA CTACCCCGACCGCCTCGCCGCGCTCGAAACGACGCTCGCGCAAGCGCGCTCGAAGATCATCGTCGTCAGCAACGAGATCG GTCTCGGCGTGGTGCCGCTCGGTGCAGCGACGCGACTCTACGTCGATGAACTGGGACGCCTGAACCAGCGCATCGCGGCC ATCAGCACGCAGACCACGATGATGGTCGCGGGCCTGCCGCTGCAACTCAAACCGGCGAGCCGCGCATGA
Upstream 100 bases:
>100_bases ACGGTGGCCACGAGCGCAAGCGGAAAAAAGGGAAGCCCGCATTATCCCATCGCGCCTGCGTCCCGCGCTGCCACGGCAGC ACAGTCGGTACAATCACGCG
Downstream 100 bases:
>100_bases TGCTCCTGTCCCTGCCCTTCGTCGCGACACTCGCCACGGCAGCCGTCGCCGTGGACAGATGGCTCGGCGAGCCCGAGCGC GGGCATCCCCTCGTCGCTTT
Product: adenosylcobinamide-phosphate guanylyltransferase
Products: NA
Alternate protein names: Adenosylcobinamide kinase; Adenosylcobinamide-phosphate guanylyltransferase [H]
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MISRDLTFVLGGARSGKSLHAEQLASTSAWPVTYVATARIGDDEFAARVARHRERRPANWALLEAPLDLPQATASIDRSE HCILIDCLTLWLANLLCPADGSPPLADYPDRLAALETTLAQARSKIIVVSNEIGLGVVPLGAATRLYVDELGRLNQRIAA ISTQTTMMVAGLPLQLKPASRA
Sequences:
>Translated_182_residues MISRDLTFVLGGARSGKSLHAEQLASTSAWPVTYVATARIGDDEFAARVARHRERRPANWALLEAPLDLPQATASIDRSE HCILIDCLTLWLANLLCPADGSPPLADYPDRLAALETTLAQARSKIIVVSNEIGLGVVPLGAATRLYVDELGRLNQRIAA ISTQTTMMVAGLPLQLKPASRA >Mature_182_residues MISRDLTFVLGGARSGKSLHAEQLASTSAWPVTYVATARIGDDEFAARVARHRERRPANWALLEAPLDLPQATASIDRSE HCILIDCLTLWLANLLCPADGSPPLADYPDRLAALETTLAQARSKIIVVSNEIGLGVVPLGAATRLYVDELGRLNQRIAA ISTQTTMMVAGLPLQLKPASRA
Specific function: Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate [H]
COG id: COG2087
COG function: function code H; Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788302, Length=181, Percent_Identity=34.2541436464088, Blast_Score=108, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003203 [H]
Pfam domain/function: PF02283 CobU [H]
EC number: =2.7.1.156; =2.7.7.62 [H]
Molecular weight: Translated: 19564; Mature: 19564
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISRDLTFVLGGARSGKSLHAEQLASTSAWPVTYVATARIGDDEFAARVARHRERRPANW CCCCCEEEEEECCCCCCCCCHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCE ALLEAPLDLPQATASIDRSEHCILIDCLTLWLANLLCPADGSPPLADYPDRLAALETTLA EEEECCCCCCHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH QARSKIIVVSNEIGLGVVPLGAATRLYVDELGRLNQRIAAISTQTTMMVAGLPLQLKPAS HHCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEECCCC RA CC >Mature Secondary Structure MISRDLTFVLGGARSGKSLHAEQLASTSAWPVTYVATARIGDDEFAARVARHRERRPANW CCCCCEEEEEECCCCCCCCCHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCE ALLEAPLDLPQATASIDRSEHCILIDCLTLWLANLLCPADGSPPLADYPDRLAALETTLA EEEECCCCCCHHHHHCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH QARSKIIVVSNEIGLGVVPLGAATRLYVDELGRLNQRIAAISTQTTMMVAGLPLQLKPAS HHCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEECCCC RA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1655697; 1655696 [H]