| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is flbA [H]
Identifier: 186476952
GI number: 186476952
Start: 2474905
End: 2476575
Strand: Direct
Name: flbA [H]
Synonym: Bphy_2201
Alternate gene names: 186476952
Gene position: 2474905-2476575 (Clockwise)
Preceding gene: 186476951
Following gene: 186476955
Centisome position: 71.13
GC content: 66.01
Gene sequence:
>1671_bases ATGCCCTCTGAATCTCCGAACTTGCAGGCCGCCTTCGAAGCCCACCTCGCCGGCCGTCTCGACGCAGCGGAACGCGGCTA TCGCGCCACGCTCGACCACGATCCACACCACGCCGACGCACTGCATCTGCTCGGCGTGGTGCTGTCCGCGCGGGGCATGT GGATCGAAGCGGAAGCGCTGCTGCGCCGCGCAATCTCATTGCGTGACGACGCGCATTTTCTCGCCAATCTCGGCGAGATC CTGCTGCGTCGCCAGCGAACGCAGGAGGCCGAACAAGCCTGCCTTCGAGCTCTCGAACTCGACCCGCGCTGCGGACTAGC GCATTTCTACCTGGCTGAAGCGCTGATGAAAACAGCGCGTGCACGCGAAGCCGAAGCGGCGTATCGCCGGGCAATAGAAC TGGAGCCGAGGCTCCTTGCCGCCCGTAACAATCTCGGCACGCTGCTGATGGACGAGAGCCGTCTCGACGAATCCGTCGCC ATGTTCCGCGAGACGCTCGAAATCGACGGGACGCATATCCACGCGCTATACAACCTCGGCATGGCGTTGCTGCGCAGCGT GCGACCCGCCGAGGCAGCCACGGCGTTCCGGCAGGCGCTCGCCGTACAGCCGGATCACCGCGACGCGTTGCACAATCTGG GCACGGCGCTCAAGCTCAATGGCCACTACGACGAAGCGGAGGCCGTCTATCGTCAGACCCTCGCGCTTGCGCCCGATTTC GCCGACGTCCAATGGAATCTCGCGGTTCTCCTGCTTACCCAAGGCCGCCTTGCGGAAGGCTGGCCGCTCGCCGAAGCGCG CTATGCGCCGCAGCGCTTTCCGAAGGACGTCGCGCCGCCGGCCGGCACGCCGCAGTGGCAAGGCGAATCGATCGACGGAA AAGCGCTCGTGTTGTGGCACGAGCAAGGCTATGGTGACTGCGTGCAGTTTGCGCGCTATGCGCCGCTTTTGAAGGCGCTC GGCGTGCGTCATCTGACGCTGATGTGCCCCGCGCCCCTCGAACCGCTGATGAAAACGCTGGATAGCGTCGACGAGGTCAA GACGCATAGCGGCCAGATCGGGCAGCACGATTTCTGGGTGTATCCGTTGAGCCTGCCGTTGCGGTTCGGCACGACGCTCG ACACGATTCCCGCCGCGCTGCCGTATCTGCATGCATCGCCGGAACGCATCGAGCGCTGGCGCGCCGCTCTGCCGGCGGTG CCCGGGCTGAAAGTCGGACTCGTGTGGAAAGGCTTCGCCGGAAACCAGCACGACGCGACGCGCTCGCTTCCCGGCCTCGC GCCGCTCGCGCCGTTGTGGAGCGTGCCCGGCGTGACGTTCTTCAGCCTGCAAAAGGGCCAGGGGGAGGACGAAGCGGCCG CGCCGCCCGCCGGGCAGCCCATCGTGAATCTCGGCTCGGCGATCGACGATTTTGCGGATACGGCGGCCATCATCGTGCAA CTGGATCTGCTGATCGCCGTCGACACGGCTGCGGCGCACGTCGCGGGCGCACTCGGCAAACCGTGCTGGCTGATGCTGCC GCACGACTGGACCGACTGGCGCTGGCTGCTCGAACGCGACGATTCGCCGTGGTATCCGGGCGTCATGCGCCTGTTCAGGC AGTCGGCCACGCGCAACTGGGAGGAAGTGGCCGAACGCATCGCGCATGCGTTACGGCAGTGGCAAAAGTGA
Upstream 100 bases:
>100_bases TGACGATTTACGACAAATCCGGCGAGCACTGCCGAACATCAGGCGATTAAGATGCGAGGTTTCACTGCGATTTCTGCCGC GCTTTCGGTGCGGCTGCACC
Downstream 100 bases:
>100_bases TCGCGCGGAAGTCCTCAGGCTGAAGCGACCAGGCGGGCGACCCAGGGGCCCAGGCCCCGTTCACCCGCCTGCCATGCAGA TCAGGCAGCGTTGCGAACCT
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 556; Mature: 555
Protein sequence:
>556_residues MPSESPNLQAAFEAHLAGRLDAAERGYRATLDHDPHHADALHLLGVVLSARGMWIEAEALLRRAISLRDDAHFLANLGEI LLRRQRTQEAEQACLRALELDPRCGLAHFYLAEALMKTARAREAEAAYRRAIELEPRLLAARNNLGTLLMDESRLDESVA MFRETLEIDGTHIHALYNLGMALLRSVRPAEAATAFRQALAVQPDHRDALHNLGTALKLNGHYDEAEAVYRQTLALAPDF ADVQWNLAVLLLTQGRLAEGWPLAEARYAPQRFPKDVAPPAGTPQWQGESIDGKALVLWHEQGYGDCVQFARYAPLLKAL GVRHLTLMCPAPLEPLMKTLDSVDEVKTHSGQIGQHDFWVYPLSLPLRFGTTLDTIPAALPYLHASPERIERWRAALPAV PGLKVGLVWKGFAGNQHDATRSLPGLAPLAPLWSVPGVTFFSLQKGQGEDEAAAPPAGQPIVNLGSAIDDFADTAAIIVQ LDLLIAVDTAAAHVAGALGKPCWLMLPHDWTDWRWLLERDDSPWYPGVMRLFRQSATRNWEEVAERIAHALRQWQK
Sequences:
>Translated_556_residues MPSESPNLQAAFEAHLAGRLDAAERGYRATLDHDPHHADALHLLGVVLSARGMWIEAEALLRRAISLRDDAHFLANLGEI LLRRQRTQEAEQACLRALELDPRCGLAHFYLAEALMKTARAREAEAAYRRAIELEPRLLAARNNLGTLLMDESRLDESVA MFRETLEIDGTHIHALYNLGMALLRSVRPAEAATAFRQALAVQPDHRDALHNLGTALKLNGHYDEAEAVYRQTLALAPDF ADVQWNLAVLLLTQGRLAEGWPLAEARYAPQRFPKDVAPPAGTPQWQGESIDGKALVLWHEQGYGDCVQFARYAPLLKAL GVRHLTLMCPAPLEPLMKTLDSVDEVKTHSGQIGQHDFWVYPLSLPLRFGTTLDTIPAALPYLHASPERIERWRAALPAV PGLKVGLVWKGFAGNQHDATRSLPGLAPLAPLWSVPGVTFFSLQKGQGEDEAAAPPAGQPIVNLGSAIDDFADTAAIIVQ LDLLIAVDTAAAHVAGALGKPCWLMLPHDWTDWRWLLERDDSPWYPGVMRLFRQSATRNWEEVAERIAHALRQWQK >Mature_555_residues PSESPNLQAAFEAHLAGRLDAAERGYRATLDHDPHHADALHLLGVVLSARGMWIEAEALLRRAISLRDDAHFLANLGEIL LRRQRTQEAEQACLRALELDPRCGLAHFYLAEALMKTARAREAEAAYRRAIELEPRLLAARNNLGTLLMDESRLDESVAM FRETLEIDGTHIHALYNLGMALLRSVRPAEAATAFRQALAVQPDHRDALHNLGTALKLNGHYDEAEAVYRQTLALAPDFA DVQWNLAVLLLTQGRLAEGWPLAEARYAPQRFPKDVAPPAGTPQWQGESIDGKALVLWHEQGYGDCVQFARYAPLLKALG VRHLTLMCPAPLEPLMKTLDSVDEVKTHSGQIGQHDFWVYPLSLPLRFGTTLDTIPAALPYLHASPERIERWRAALPAVP GLKVGLVWKGFAGNQHDATRSLPGLAPLAPLWSVPGVTFFSLQKGQGEDEAAAPPAGQPIVNLGSAIDDFADTAAIIVQL DLLIAVDTAAAHVAGALGKPCWLMLPHDWTDWRWLLERDDSPWYPGVMRLFRQSATRNWEEVAERIAHALRQWQK
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 TPR repeats [H]
Homologues:
Organism=Homo sapiens, GI32307150, Length=254, Percent_Identity=31.1023622047244, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI32307148, Length=254, Percent_Identity=31.1023622047244, Blast_Score=97, Evalue=5e-20, Organism=Homo sapiens, GI301336134, Length=244, Percent_Identity=29.5081967213115, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI83415184, Length=245, Percent_Identity=29.3877551020408, Blast_Score=81, Evalue=3e-15, Organism=Homo sapiens, GI118766330, Length=242, Percent_Identity=27.6859504132231, Blast_Score=76, Evalue=7e-14, Organism=Homo sapiens, GI118766328, Length=242, Percent_Identity=27.6859504132231, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI22749211, Length=266, Percent_Identity=30.4511278195489, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115532690, Length=232, Percent_Identity=29.3103448275862, Blast_Score=90, Evalue=3e-18, Organism=Caenorhabditis elegans, GI115532692, Length=232, Percent_Identity=29.3103448275862, Blast_Score=89, Evalue=5e-18, Organism=Caenorhabditis elegans, GI25147174, Length=189, Percent_Identity=27.5132275132275, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI17647755, Length=255, Percent_Identity=29.8039215686275, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI24585827, Length=255, Percent_Identity=29.8039215686275, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI24585829, Length=255, Percent_Identity=29.8039215686275, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI161076610, Length=253, Percent_Identity=30.4347826086957, Blast_Score=70, Evalue=5e-12, Organism=Drosophila melanogaster, GI19920486, Length=253, Percent_Identity=30.4347826086957, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI24656717, Length=266, Percent_Identity=26.3157894736842, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI18110006, Length=266, Percent_Identity=26.3157894736842, Blast_Score=69, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61598; Mature: 61467
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSESPNLQAAFEAHLAGRLDAAERGYRATLDHDPHHADALHLLGVVLSARGMWIEAEAL CCCCCCCCHHHHHHHHHHCCCHHHCCCEECCCCCCCHHHHHHHHHHHHHCCCCEEEHHHH LRRAISLRDDAHFLANLGEILLRRQRTQEAEQACLRALELDPRCGLAHFYLAEALMKTAR HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH AREAEAAYRRAIELEPRLLAARNNLGTLLMDESRLDESVAMFRETLEIDGTHIHALYNLG HHHHHHHHHHHHCCCCHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHH MALLRSVRPAEAATAFRQALAVQPDHRDALHNLGTALKLNGHYDEAEAVYRQTLALAPDF HHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCC ADVQWNLAVLLLTQGRLAEGWPLAEARYAPQRFPKDVAPPAGTPQWQGESIDGKALVLWH CCCEEEEEEEEEECCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEE EQGYGDCVQFARYAPLLKALGVRHLTLMCPAPLEPLMKTLDSVDEVKTHSGQIGQHDFWV CCCCHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEE YPLSLPLRFGTTLDTIPAALPYLHASPERIERWRAALPAVPGLKVGLVWKGFAGNQHDAT EEEEECEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHH RSLPGLAPLAPLWSVPGVTFFSLQKGQGEDEAAAPPAGQPIVNLGSAIDDFADTAAIIVQ HCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LDLLIAVDTAAAHVAGALGKPCWLMLPHDWTDWRWLLERDDSPWYPGVMRLFRQSATRNW HHHHHEEHHHHHHHHHHCCCCEEEEECCCCCCHHHHEECCCCCCCHHHHHHHHHHHCCCH EEVAERIAHALRQWQK HHHHHHHHHHHHHHCC >Mature Secondary Structure PSESPNLQAAFEAHLAGRLDAAERGYRATLDHDPHHADALHLLGVVLSARGMWIEAEAL CCCCCCCHHHHHHHHHHCCCHHHCCCEECCCCCCCHHHHHHHHHHHHHCCCCEEEHHHH LRRAISLRDDAHFLANLGEILLRRQRTQEAEQACLRALELDPRCGLAHFYLAEALMKTAR HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH AREAEAAYRRAIELEPRLLAARNNLGTLLMDESRLDESVAMFRETLEIDGTHIHALYNLG HHHHHHHHHHHHCCCCHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHH MALLRSVRPAEAATAFRQALAVQPDHRDALHNLGTALKLNGHYDEAEAVYRQTLALAPDF HHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCC ADVQWNLAVLLLTQGRLAEGWPLAEARYAPQRFPKDVAPPAGTPQWQGESIDGKALVLWH CCCEEEEEEEEEECCCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEE EQGYGDCVQFARYAPLLKALGVRHLTLMCPAPLEPLMKTLDSVDEVKTHSGQIGQHDFWV CCCCHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEE YPLSLPLRFGTTLDTIPAALPYLHASPERIERWRAALPAVPGLKVGLVWKGFAGNQHDAT EEEEECEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHH RSLPGLAPLAPLWSVPGVTFFSLQKGQGEDEAAAPPAGQPIVNLGSAIDDFADTAAIIVQ HCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LDLLIAVDTAAAHVAGALGKPCWLMLPHDWTDWRWLLERDDSPWYPGVMRLFRQSATRNW HHHHHEEHHHHHHHHHHCCCCEEEEECCCCCCHHHHEECCCCCCCHHHHHHHHHHHCCCH EEVAERIAHALRQWQK HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748431; 11259647; 1699845 [H]