Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is pssA [H]

Identifier: 186476773

GI number: 186476773

Start: 2270263

End: 2271135

Strand: Reverse

Name: pssA [H]

Synonym: Bphy_2018

Alternate gene names: 186476773

Gene position: 2271135-2270263 (Counterclockwise)

Preceding gene: 186476774

Following gene: 186476772

Centisome position: 65.28

GC content: 62.54

Gene sequence:

>873_bases
ATGGCCGCATTCAAACCGCGTCGTCCTCGTAGCAGCGGTGCGCCGCAGCCGCGTCCGTTCCGGCGCAACAAACCGCCCGT
GGTCGCGGAGTCCGTGATCGACAGTCGCCGTGCCGCGCGTCAGCAGTTTCTGCGCAAGCGCGGCATCTACCTGTTGCCTA
ATGCGTTCACGACGGCCGCGCTATTCTGCGGCTTCTTCGCCGTCGTGCAGGCGATGAACGTGCGTTTCGAAGTCGCCGCC
ATTGCGATATTCGTCGCGATGGTGCTCGACGGCATGGATGGACGCGTCGCGCGTATGACGCATACCCAAAGTGCATTCGG
CGAGCAGTTCGACAGCCTGTCGGACATGGTGTCGTTCGGGGTTGCGCCGGCGCTCGTGATGTACGAGTGGATCCTGAAGG
ATCTGGGGCGCTGGGGCTGGCTCGCAGCGTTCGTTTATTGCTCGGGCGCGGCGCTGCGTCTGGCGCGTTTCAACACGAAT
ATCGGCGTCGTGGACAAGCGCTTTTTCCAGGGCATGCCGAGTCCTGCCGCCGCCGCGCTGATCGCGGGGTTCGTGTGGCT
GGCGACAGACAATCGGGTCCCTTTGAAACTCGTGTGGCTGCCTTGGGTTGCGTTTGCGCTGACCATTTATGCGGGTGTGA
CGATGGTGTCGAACGCGCCGTTCTACAGCGGCAAGGCGCTAGATGTGCGGCATCGCGTGCCGTTCGCGGCAATTCTGCTG
GTGGTGGTCGCGTTTGTGCTCGTGTCGTCGGATCCGCCGCTGATGTTGTTCGGTCTCTTCGTGTTGTACGGTTTTTCCGG
ATATGTGTTCTGGGGCTATCGCGTGATGCGCGGGATGGGAAATCCAGCCCGATCGTCGCAGCGGCCGGGATAA

Upstream 100 bases:

>100_bases
ATCTTCCTGTGGGCAGCCGTCCGCGTGTGTCGATCGGCGAAAAGGTGTCGGCGTCGTCCACGATTCTGGCTGAGCTGTAA
AGCGGCACAGGGAGGGTTCG

Downstream 100 bases:

>100_bases
GGTTTACGTTTTGTTTTTTGCCTGCGACGCGGTCGCCCGCGGTCGCCCATTGTTGGCTTCAGGCTGGTATCCGCGTGATG
TTTGTAGTTTGCTGGTGTTG

Product: CDP-diacylglycerol--serine O-phosphatidyltransferase

Products: NA

Alternate protein names: Phosphatidylserine synthase [H]

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MAAFKPRRPRSSGAPQPRPFRRNKPPVVAESVIDSRRAARQQFLRKRGIYLLPNAFTTAALFCGFFAVVQAMNVRFEVAA
IAIFVAMVLDGMDGRVARMTHTQSAFGEQFDSLSDMVSFGVAPALVMYEWILKDLGRWGWLAAFVYCSGAALRLARFNTN
IGVVDKRFFQGMPSPAAAALIAGFVWLATDNRVPLKLVWLPWVAFALTIYAGVTMVSNAPFYSGKALDVRHRVPFAAILL
VVVAFVLVSSDPPLMLFGLFVLYGFSGYVFWGYRVMRGMGNPARSSQRPG

Sequences:

>Translated_290_residues
MAAFKPRRPRSSGAPQPRPFRRNKPPVVAESVIDSRRAARQQFLRKRGIYLLPNAFTTAALFCGFFAVVQAMNVRFEVAA
IAIFVAMVLDGMDGRVARMTHTQSAFGEQFDSLSDMVSFGVAPALVMYEWILKDLGRWGWLAAFVYCSGAALRLARFNTN
IGVVDKRFFQGMPSPAAAALIAGFVWLATDNRVPLKLVWLPWVAFALTIYAGVTMVSNAPFYSGKALDVRHRVPFAAILL
VVVAFVLVSSDPPLMLFGLFVLYGFSGYVFWGYRVMRGMGNPARSSQRPG
>Mature_289_residues
AAFKPRRPRSSGAPQPRPFRRNKPPVVAESVIDSRRAARQQFLRKRGIYLLPNAFTTAALFCGFFAVVQAMNVRFEVAAI
AIFVAMVLDGMDGRVARMTHTQSAFGEQFDSLSDMVSFGVAPALVMYEWILKDLGRWGWLAAFVYCSGAALRLARFNTNI
GVVDKRFFQGMPSPAAAALIAGFVWLATDNRVPLKLVWLPWVAFALTIYAGVTMVSNAPFYSGKALDVRHRVPFAAILLV
VVAFVLVSSDPPLMLFGLFVLYGFSGYVFWGYRVMRGMGNPARSSQRPG

Specific function: Unknown

COG id: COG1183

COG function: function code I; Phosphatidylserine synthase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320864, Length=185, Percent_Identity=30.2702702702703, Blast_Score=80, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004533
- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: =2.7.8.8 [H]

Molecular weight: Translated: 32063; Mature: 31932

Theoretical pI: Translated: 11.39; Mature: 11.39

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAFKPRRPRSSGAPQPRPFRRNKPPVVAESVIDSRRAARQQFLRKRGIYLLPNAFTTAA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHH
LFCGFFAVVQAMNVRFEVAAIAIFVAMVLDGMDGRVARMTHTQSAFGEQFDSLSDMVSFG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VAPALVMYEWILKDLGRWGWLAAFVYCSGAALRLARFNTNIGVVDKRFFQGMPSPAAAAL
HHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHEEEHCCCCCCHHHHHHHCCCCCHHHHHH
IAGFVWLATDNRVPLKLVWLPWVAFALTIYAGVTMVSNAPFYSGKALDVRHRVPFAAILL
HHHHHHEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHCCCHHHHHH
VVVAFVLVSSDPPLMLFGLFVLYGFSGYVFWGYRVMRGMGNPARSSQRPG
HHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AAFKPRRPRSSGAPQPRPFRRNKPPVVAESVIDSRRAARQQFLRKRGIYLLPNAFTTAA
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHH
LFCGFFAVVQAMNVRFEVAAIAIFVAMVLDGMDGRVARMTHTQSAFGEQFDSLSDMVSFG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VAPALVMYEWILKDLGRWGWLAAFVYCSGAALRLARFNTNIGVVDKRFFQGMPSPAAAAL
HHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHEEEHCCCCCCHHHHHHHCCCCCHHHHHH
IAGFVWLATDNRVPLKLVWLPWVAFALTIYAGVTMVSNAPFYSGKALDVRHRVPFAAILL
HHHHHHEECCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHCCCHHHHHH
VVVAFVLVSSDPPLMLFGLFVLYGFSGYVFWGYRVMRGMGNPARSSQRPG
HHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]