| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is nuoH
Identifier: 186476757
GI number: 186476757
Start: 2252067
End: 2253131
Strand: Reverse
Name: nuoH
Synonym: Bphy_2002
Alternate gene names: 186476757
Gene position: 2253131-2252067 (Counterclockwise)
Preceding gene: 186476758
Following gene: 186476756
Centisome position: 64.76
GC content: 61.03
Gene sequence:
>1065_bases ATGACCTTGTTCGAATCGATCAACGCGGGCGGCACCCAGATTCTCGGCGTCGCATGGCCCACCGTGTGGGCCCTCGTGCG CATTCTCGTAGTGGCCGTCGTCATCCTGCTGTGTGTCGCGTACCTGATCCTGTGGGAGCGTAAGCTGATCGGCTGGATGC ACGTTCGTCTTGGCCCGAATCGGGTCGGCCCCGCCGGTCTGCTGCAGCCGATCGCCGACGTGCTCAAGCTGCTGCTGAAA GAAGTGATCCAGCCGACTCAGGCAAGCCGCTGGGTCTATCTGGTTGCCCCCGTCATGGTGGTGGTTCCCGCATTCGCGGT CTGGGCGGTGATTCCGTTCCAGGCGGGCGCGGTGCTGGGCGACATCAATGCGGGTCTGCTGTACGCGATTTCGATCTCGT CGGTCGGCGTGTACGGCGTGATTCTGGCGGGCTGGGCGTCGAACTCGAAGTACGCGTTCCTCGGCGCGATGCGCGCAGCG GCACAGATGGTGTCGTACGAAGTGTCGATGGGCTTTGCGCTGGTCGTCGTGATGATGACGGCGGGCACGATGAACCTGTC GGACATCGTCGGTTCGCAGATGCGCGGCATCTTCGCGAGTCACGGCGTAACGTTCCTGTCGTGGAACTGGCTGCCGTTGC TGCCGGCCTTCGTCGTCTACTTCGTGTCGGGTATCGCCGAAACGAACCGTCACCCGTTCGACGTGGTGGAAGGCGAGTCG GAAATCGTCGCGGGTCACATGATCGATTACTCGGGTATGGCGTTCGCGCTGTTCTTCCTCGCCGAGTACATCAACATGAT CGTCATTTCGGCACTGGCATCGATCCTGTTCCTGGGCGGCTGGAGCGCACCGTTCGAATTCCTGTCGTTCATCCCGGGCA TTGTCTGGCTGGTCCTGAAAGTCTTCCTCCTGCTGTCGGTATTCATCTGGGTGCGTGCGACGTTCCCGCGCTACCGCTAT GACCAGATCATGCGTCTGGGCTGGAAGGTGTTTCTGCCTGTCACCGTGATCTGGGTCGTGGTGGTCGGCTTCTGGATCAT GTCGCCGTTGAATATCTGGAACTAA
Upstream 100 bases:
>100_bases TGCGAATCTTGCGGAGACGGTCGTCCGCGTGTCGGCGGCTACGCCTGCCGGTGCAGCGCTGGGCAGCCTGTTCGGTGAAC TGGTGGTGGAGAAGGCGTAA
Downstream 100 bases:
>100_bases AGGGCGGACGAACCATGACCGCAATCCAAAATTTCTTCAAGACCTTCTTTCTGACCGAGCTGCTCAAGGGCCTCGCGCTG ACGGGACGCTACACGTTCCA
Product: NADH dehydrogenase subunit H
Products: NA
Alternate protein names: NADH dehydrogenase I subunit H; NDH-1 subunit H
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MTLFESINAGGTQILGVAWPTVWALVRILVVAVVILLCVAYLILWERKLIGWMHVRLGPNRVGPAGLLQPIADVLKLLLK EVIQPTQASRWVYLVAPVMVVVPAFAVWAVIPFQAGAVLGDINAGLLYAISISSVGVYGVILAGWASNSKYAFLGAMRAA AQMVSYEVSMGFALVVVMMTAGTMNLSDIVGSQMRGIFASHGVTFLSWNWLPLLPAFVVYFVSGIAETNRHPFDVVEGES EIVAGHMIDYSGMAFALFFLAEYINMIVISALASILFLGGWSAPFEFLSFIPGIVWLVLKVFLLLSVFIWVRATFPRYRY DQIMRLGWKVFLPVTVIWVVVVGFWIMSPLNIWN
Sequences:
>Translated_354_residues MTLFESINAGGTQILGVAWPTVWALVRILVVAVVILLCVAYLILWERKLIGWMHVRLGPNRVGPAGLLQPIADVLKLLLK EVIQPTQASRWVYLVAPVMVVVPAFAVWAVIPFQAGAVLGDINAGLLYAISISSVGVYGVILAGWASNSKYAFLGAMRAA AQMVSYEVSMGFALVVVMMTAGTMNLSDIVGSQMRGIFASHGVTFLSWNWLPLLPAFVVYFVSGIAETNRHPFDVVEGES EIVAGHMIDYSGMAFALFFLAEYINMIVISALASILFLGGWSAPFEFLSFIPGIVWLVLKVFLLLSVFIWVRATFPRYRY DQIMRLGWKVFLPVTVIWVVVVGFWIMSPLNIWN >Mature_353_residues TLFESINAGGTQILGVAWPTVWALVRILVVAVVILLCVAYLILWERKLIGWMHVRLGPNRVGPAGLLQPIADVLKLLLKE VIQPTQASRWVYLVAPVMVVVPAFAVWAVIPFQAGAVLGDINAGLLYAISISSVGVYGVILAGWASNSKYAFLGAMRAAA QMVSYEVSMGFALVVVMMTAGTMNLSDIVGSQMRGIFASHGVTFLSWNWLPLLPAFVVYFVSGIAETNRHPFDVVEGESE IVAGHMIDYSGMAFALFFLAEYINMIVISALASILFLGGWSAPFEFLSFIPGIVWLVLKVFLLLSVFIWVRATFPRYRYD QIMRLGWKVFLPVTVIWVVVVGFWIMSPLNIWN
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1005
COG function: function code C; NADH:ubiquinone oxidoreductase subunit 1 (chain H)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 1 family
Homologues:
Organism=Homo sapiens, GI251831107, Length=299, Percent_Identity=41.1371237458194, Blast_Score=246, Evalue=3e-65, Organism=Escherichia coli, GI1788618, Length=319, Percent_Identity=40.1253918495298, Blast_Score=258, Evalue=4e-70, Organism=Escherichia coli, GI1789077, Length=289, Percent_Identity=26.643598615917, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NUOH_BURP8 (B2JDM1)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001858227.1 - GeneID: 6243491 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_2002 - HOGENOM: HBG727670 - OMA: FMVEYGS - ProtClustDB: PRK06076 - HAMAP: MF_01350 - InterPro: IPR023020 - InterPro: IPR001694 - InterPro: IPR018086 - PANTHER: PTHR11432
Pfam domain/function: PF00146 NADHdh
EC number: =1.6.99.5
Molecular weight: Translated: 39069; Mature: 38938
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: PS00667 COMPLEX1_ND1_1; PS00668 COMPLEX1_ND1_2
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1f3537f4)-; HASH(0x1eea8e50)-; HASH(0x1f01dec0)-; HASH(0x1f423b80)-; HASH(0x1f41e93c)-; HASH(0x1ee34928)-; HASH(0x1e7a16f8)-; HASH(0x1f41c200)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFESINAGGTQILGVAWPTVWALVRILVVAVVILLCVAYLILWERKLIGWMHVRLGPN CCCHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC RVGPAGLLQPIADVLKLLLKEVIQPTQASRWVYLVAPVMVVVPAFAVWAVIPFQAGAVLG CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEE DINAGLLYAISISSVGVYGVILAGWASNSKYAFLGAMRAAAQMVSYEVSMGFALVVVMMT CCCCCEEEEEEHHCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGTMNLSDIVGSQMRGIFASHGVTFLSWNWLPLLPAFVVYFVSGIAETNRHPFDVVEGES CCCCCHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCC EIVAGHMIDYSGMAFALFFLAEYINMIVISALASILFLGGWSAPFEFLSFIPGIVWLVLK CEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VFLLLSVFIWVRATFPRYRYDQIMRLGWKVFLPVTVIWVVVVGFWIMSPLNIWN HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCH >Mature Secondary Structure TLFESINAGGTQILGVAWPTVWALVRILVVAVVILLCVAYLILWERKLIGWMHVRLGPN CCHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC RVGPAGLLQPIADVLKLLLKEVIQPTQASRWVYLVAPVMVVVPAFAVWAVIPFQAGAVLG CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEE DINAGLLYAISISSVGVYGVILAGWASNSKYAFLGAMRAAAQMVSYEVSMGFALVVVMMT CCCCCEEEEEEHHCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGTMNLSDIVGSQMRGIFASHGVTFLSWNWLPLLPAFVVYFVSGIAETNRHPFDVVEGES CCCCCHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCC EIVAGHMIDYSGMAFALFFLAEYINMIVISALASILFLGGWSAPFEFLSFIPGIVWLVLK CEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VFLLLSVFIWVRATFPRYRYDQIMRLGWKVFLPVTVIWVVVVGFWIMSPLNIWN HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA