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The map label for this gene is ydiK [H]

Identifier: 186476728

GI number: 186476728

Start: 2223780

End: 2224928

Strand: Reverse

Name: ydiK [H]

Synonym: Bphy_1973

Alternate gene names: 186476728

Gene position: 2224928-2223780 (Counterclockwise)

Preceding gene: 186476733

Following gene: 186476727

Centisome position: 63.95

GC content: 63.27

Gene sequence:

>1149_bases
ATGGCATGGCACGGGGAGTGGTGCATGGTGAAATCGGACCAACTGATAGAACGGCTGGCGGCCGTATTTGCGTTGCTGTT
GCTGGTCGGCGGCTCGCTGCTGGTGCTGGCGCCGTTCACGACCGCGTTGTTGTGGGGCGCGATCCTGAGTTTTAGCTCGT
GGGGCTTGTACTGCAAGCTGGCGACGAGCCTGGGCGGACGGCGCAGGTGGGCCGCGACGTTGATCGTGCTGATCATTCTC
ATCGTCGTGCTGGGGCCGTTCGTCTATGCGGGGTTTGCCCTTGGCGCGCATACCAGGGACATCACCGCGCTTGTTCAGCA
CCTGATGGACGCCGGGTTGCCGGACCTGCCAGATTGGGTCGCACGGATTCCCTTGGTCGGTTCGAGCATCGAGTCGTTCT
GGGAACGCGTGACCAGTAGCAATTCCGAGATGGTTGCGCAGCTGCGCGGACTGGCGGCCCCGGCAGGCAAATGGATTCTC
GCGGCAGCGCTCGCCGTTACGCATGGCTTGGGCTTGCTCGCGCTCAGTATCATCCTGACGTTCTTCTTTTATACGGGCGG
CGAGGGCGCGGCCGCATGGCTCAACGCGGGCATGCGGCGCATTGCCGGCGAACGCGCCGATTATCTGCTGGCTTTGGCGG
GAAGCACGGTGAAGGGCGTGGTGTACGGCATTCTCGGCACGGCGTTGGTGCAGGGCGTGCTGGCCGGCTTCGGCTGCTGG
ATTGCGGGTGTGCCCGCGCCGGCGTTGCTCGGGCTCGCGACGTTTTTTTTGTCGGTGATTCCAGGCGGCCCGGTCGTGGT
ATGGCTGCCCGCGGCGATCTGGCTGTATCACGGCGGCGAGACGGGGTGGGCGATCTTCCTCGTGGTGTGGGGCGTGGTCG
TCGTGGGTATGTCCGATAACGTCGTCAAGCCGATCCTGATCGGCAAGAGCAGTGACATGCCGTTGATCCTCGTGATGCTT
GGCATCCTCGGCGGTGCATTCGCGTTTGGTTTCCTTGGCGTATTTATCGGGCCGACTTTGCTCGCTGTGGCCTATACCGT
GCTGCATGACTGGACGATTGGTTCGCCCGAGGCCCGCGAACTGATTGCGAAGGCGGGTGAAAAGCCGGTGGACACAGTCG
TGCAGGTCGAGAAGGCGCCAGGGAAATGA

Upstream 100 bases:

>100_bases
GGATACGGGCTTGCTCACCGCTGAATGACCCACCTGAGGCCGCGCTTTCGTCGCTTTATCCGGGGCTTTTCTATACTCGT
TCTGCAGGGCGTGGCTCGAG

Downstream 100 bases:

>100_bases
TGTGAAAGTGACCCCGATAAAAATCTGCGTCACACCCTTGTCATGAGGCGCGGGATGGCCTAAGATTCGCGTCCTCGTTC
GGGAGCGCGGTGTTCTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MAWHGEWCMVKSDQLIERLAAVFALLLLVGGSLLVLAPFTTALLWGAILSFSSWGLYCKLATSLGGRRRWAATLIVLIIL
IVVLGPFVYAGFALGAHTRDITALVQHLMDAGLPDLPDWVARIPLVGSSIESFWERVTSSNSEMVAQLRGLAAPAGKWIL
AAALAVTHGLGLLALSIILTFFFYTGGEGAAAWLNAGMRRIAGERADYLLALAGSTVKGVVYGILGTALVQGVLAGFGCW
IAGVPAPALLGLATFFLSVIPGGPVVVWLPAAIWLYHGGETGWAIFLVVWGVVVVGMSDNVVKPILIGKSSDMPLILVML
GILGGAFAFGFLGVFIGPTLLAVAYTVLHDWTIGSPEARELIAKAGEKPVDTVVQVEKAPGK

Sequences:

>Translated_382_residues
MAWHGEWCMVKSDQLIERLAAVFALLLLVGGSLLVLAPFTTALLWGAILSFSSWGLYCKLATSLGGRRRWAATLIVLIIL
IVVLGPFVYAGFALGAHTRDITALVQHLMDAGLPDLPDWVARIPLVGSSIESFWERVTSSNSEMVAQLRGLAAPAGKWIL
AAALAVTHGLGLLALSIILTFFFYTGGEGAAAWLNAGMRRIAGERADYLLALAGSTVKGVVYGILGTALVQGVLAGFGCW
IAGVPAPALLGLATFFLSVIPGGPVVVWLPAAIWLYHGGETGWAIFLVVWGVVVVGMSDNVVKPILIGKSSDMPLILVML
GILGGAFAFGFLGVFIGPTLLAVAYTVLHDWTIGSPEARELIAKAGEKPVDTVVQVEKAPGK
>Mature_381_residues
AWHGEWCMVKSDQLIERLAAVFALLLLVGGSLLVLAPFTTALLWGAILSFSSWGLYCKLATSLGGRRRWAATLIVLIILI
VVLGPFVYAGFALGAHTRDITALVQHLMDAGLPDLPDWVARIPLVGSSIESFWERVTSSNSEMVAQLRGLAAPAGKWILA
AALAVTHGLGLLALSIILTFFFYTGGEGAAAWLNAGMRRIAGERADYLLALAGSTVKGVVYGILGTALVQGVLAGFGCWI
AGVPAPALLGLATFFLSVIPGGPVVVWLPAAIWLYHGGETGWAIFLVVWGVVVVGMSDNVVKPILIGKSSDMPLILVMLG
ILGGAFAFGFLGVFIGPTLLAVAYTVLHDWTIGSPEARELIAKAGEKPVDTVVQVEKAPGK

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=351, Percent_Identity=29.9145299145299, Blast_Score=157, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40195; Mature: 40064

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWHGEWCMVKSDQLIERLAAVFALLLLVGGSLLVLAPFTTALLWGAILSFSSWGLYCKL
CCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCHHEEE
ATSLGGRRRWAATLIVLIILIVVLGPFVYAGFALGAHTRDITALVQHLMDAGLPDLPDWV
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHH
ARIPLVGSSIESFWERVTSSNSEMVAQLRGLAAPAGKWILAAALAVTHGLGLLALSIILT
HHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FFFYTGGEGAAAWLNAGMRRIAGERADYLLALAGSTVKGVVYGILGTALVQGVLAGFGCW
HHHHCCCCHHHHHHHHHHHHHHCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
IAGVPAPALLGLATFFLSVIPGGPVVVWLPAAIWLYHGGETGWAIFLVVWGVVVVGMSDN
HHCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
VVKPILIGKSSDMPLILVMLGILGGAFAFGFLGVFIGPTLLAVAYTVLHDWTIGSPEARE
CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LIAKAGEKPVDTVVQVEKAPGK
HHHHCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
AWHGEWCMVKSDQLIERLAAVFALLLLVGGSLLVLAPFTTALLWGAILSFSSWGLYCKL
CCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCCCHHEEE
ATSLGGRRRWAATLIVLIILIVVLGPFVYAGFALGAHTRDITALVQHLMDAGLPDLPDWV
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHH
ARIPLVGSSIESFWERVTSSNSEMVAQLRGLAAPAGKWILAAALAVTHGLGLLALSIILT
HHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FFFYTGGEGAAAWLNAGMRRIAGERADYLLALAGSTVKGVVYGILGTALVQGVLAGFGCW
HHHHCCCCHHHHHHHHHHHHHHCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
IAGVPAPALLGLATFFLSVIPGGPVVVWLPAAIWLYHGGETGWAIFLVVWGVVVVGMSDN
HHCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCC
VVKPILIGKSSDMPLILVMLGILGGAFAFGFLGVFIGPTLLAVAYTVLHDWTIGSPEARE
CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LIAKAGEKPVDTVVQVEKAPGK
HHHHCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]