Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476686

Identifier: 186476686

GI number: 186476686

Start: 2173403

End: 2174776

Strand: Reverse

Name: 186476686

Synonym: Bphy_1931

Alternate gene names: NA

Gene position: 2174776-2173403 (Counterclockwise)

Preceding gene: 186476687

Following gene: 186476685

Centisome position: 62.51

GC content: 49.85

Gene sequence:

>1374_bases
ATGGCTCATCCGCATCACACACAGCATCCGGCAGGGCCTAAGGCTCCGCCGTCACCCTACGTCGAAGTGACTTTCCTGTT
TAGGGATACGCTGCAAAAACCAATTGAAGGGCTCACCGTTCAGATTAAGGCGGGTGCGGGCGCTCCGCAAGCGCCCGCAT
GGAAACTTGGACCAGACGGTGATGATCCGCCTGCTACAGATCCGGCGTCGGCCCCCGCAGCGAATCCTTCCGTGCCGATG
GTGGATAACAAGGCAGATGCGCTAGTAACGGACAAGGACGGCTACGCCCTGACGATCCAGAACGCTGCGCGCAACCAGCC
GATTGATGTGCTGGTGAAGAACCAACGTGGCGAGTACGTGTGGAAGGCGACCGTGACGCCGAAAAAGGACATCAGCGCAT
TCACGATTGTCAGTCCAGAGTACCACCTGGAAGCGACGACGAAGCTGACGCCCACAGAAGAGTTGCAGCAGAACCTCGAC
CTACCGGTTGTTCAGCAAGGCGAGGTTATGACCATTGCGCGTCTGGTTCACGACTTCGGGCCGTATATTGGCTGGTCGCA
GAAAGTTACCGAGCAGGGTCGCGTGAAGAAGGATTTTCCCGAGAAAAAGAAGGACGTGACGGAAGATCCTGTAACCCATA
AAAAGAAAACGAAGATTACCATTGAACACCATTACAAAGTTGTCGATACCGGCAAGCCTCAAACGGTCGCGCTCAATGTG
CTTGGGTCCAGGCTTAGTTATCCGAAATCAATACTATTGACGGATGACCACTTCAGTTATTTGGCAAATTCGCTTGGCTG
TGAGGCCGCAGCTATTAAGGCGCTATCAAAACAGGAAACTGTCGGCAAAGGGATGTGGCAGCCGGATCATGGATTTGATA
AAAATGGCTTGCCACGAATTCTATATGAGCGGCATAAATTTTACGCTTATACTATGCCTGATACGAATAAAAATAGTAAA
AATAAACCAGTAAGCCCCTACGCAAAAAAATATCCGGACATCTGTAATCCGGCATCAGGTGGATTCGGAAAGGAGGGGTT
GCATCAATACGAAAGATTCTGCCGTGCGGCAAGCTTGGATATGGAAGCCGCTGCTAAGTCGAGTTCGTGGGGCGCGTTTC
AAATACTTGGTGAAGCTTACGATGGATGTGGATTTTCTTCTGCTGTGGATTTTGCAAACCAGCACATGAAAGGAATAGAT
GAGCAGGTAAAAGTTTTTGAGGCTTTCATGAAGAATGTGAAACCACAAGCTGTTAAGGCTTTAAAGGACAAGAAGTGGGA
AGATGTTGCAACTTATTACAACGGCGGGAACTGGCGCAAGAAGAATCCAGACTATGCAAAGAATTTAGGGGATTTCTATG
CGTCGTTTAAATGA

Upstream 100 bases:

>100_bases
GGCGTGGTCGAAGACGCTTACGACCACCACGAACTGGAAGATGACTCCGCGCAGGCTTGAAACGGGCTTGCTCTTTAAAA
TGATTTGTGAAAGGTAATTG

Downstream 100 bases:

>100_bases
ATTCATTACCATGATTGTCGCCGCTTTGTCATTTTCGGGTGCGACTAATGCCGCTGATCTGTTGATTTTTGATTCTCCAA
ATATGATTATGTTAAAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Phage-Related Cell Wall Hydrolase; Bacteriophage-Acquired Protein; DNA-Directed RNA Polymerase Beta Chain; Lytic Phage PhiCTX_orf; Gp43 Bacteriophage-Acquired Protein; LysM Domain Protein

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MAHPHHTQHPAGPKAPPSPYVEVTFLFRDTLQKPIEGLTVQIKAGAGAPQAPAWKLGPDGDDPPATDPASAPAANPSVPM
VDNKADALVTDKDGYALTIQNAARNQPIDVLVKNQRGEYVWKATVTPKKDISAFTIVSPEYHLEATTKLTPTEELQQNLD
LPVVQQGEVMTIARLVHDFGPYIGWSQKVTEQGRVKKDFPEKKKDVTEDPVTHKKKTKITIEHHYKVVDTGKPQTVALNV
LGSRLSYPKSILLTDDHFSYLANSLGCEAAAIKALSKQETVGKGMWQPDHGFDKNGLPRILYERHKFYAYTMPDTNKNSK
NKPVSPYAKKYPDICNPASGGFGKEGLHQYERFCRAASLDMEAAAKSSSWGAFQILGEAYDGCGFSSAVDFANQHMKGID
EQVKVFEAFMKNVKPQAVKALKDKKWEDVATYYNGGNWRKKNPDYAKNLGDFYASFK

Sequences:

>Translated_457_residues
MAHPHHTQHPAGPKAPPSPYVEVTFLFRDTLQKPIEGLTVQIKAGAGAPQAPAWKLGPDGDDPPATDPASAPAANPSVPM
VDNKADALVTDKDGYALTIQNAARNQPIDVLVKNQRGEYVWKATVTPKKDISAFTIVSPEYHLEATTKLTPTEELQQNLD
LPVVQQGEVMTIARLVHDFGPYIGWSQKVTEQGRVKKDFPEKKKDVTEDPVTHKKKTKITIEHHYKVVDTGKPQTVALNV
LGSRLSYPKSILLTDDHFSYLANSLGCEAAAIKALSKQETVGKGMWQPDHGFDKNGLPRILYERHKFYAYTMPDTNKNSK
NKPVSPYAKKYPDICNPASGGFGKEGLHQYERFCRAASLDMEAAAKSSSWGAFQILGEAYDGCGFSSAVDFANQHMKGID
EQVKVFEAFMKNVKPQAVKALKDKKWEDVATYYNGGNWRKKNPDYAKNLGDFYASFK
>Mature_456_residues
AHPHHTQHPAGPKAPPSPYVEVTFLFRDTLQKPIEGLTVQIKAGAGAPQAPAWKLGPDGDDPPATDPASAPAANPSVPMV
DNKADALVTDKDGYALTIQNAARNQPIDVLVKNQRGEYVWKATVTPKKDISAFTIVSPEYHLEATTKLTPTEELQQNLDL
PVVQQGEVMTIARLVHDFGPYIGWSQKVTEQGRVKKDFPEKKKDVTEDPVTHKKKTKITIEHHYKVVDTGKPQTVALNVL
GSRLSYPKSILLTDDHFSYLANSLGCEAAAIKALSKQETVGKGMWQPDHGFDKNGLPRILYERHKFYAYTMPDTNKNSKN
KPVSPYAKKYPDICNPASGGFGKEGLHQYERFCRAASLDMEAAAKSSSWGAFQILGEAYDGCGFSSAVDFANQHMKGIDE
QVKVFEAFMKNVKPQAVKALKDKKWEDVATYYNGGNWRKKNPDYAKNLGDFYASFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50579; Mature: 50447

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHPHHTQHPAGPKAPPSPYVEVTFLFRDTLQKPIEGLTVQIKAGAGAPQAPAWKLGPDG
CCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCC
DDPPATDPASAPAANPSVPMVDNKADALVTDKDGYALTIQNAARNQPIDVLVKNQRGEYV
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCEEEEEECCCCCEE
WKATVTPKKDISAFTIVSPEYHLEATTKLTPTEELQQNLDLPVVQQGEVMTIARLVHDFG
EEEECCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHCCCCCEECCCCHHHHHHHHHHHC
PYIGWSQKVTEQGRVKKDFPEKKKDVTEDPVTHKKKTKITIEHHYKVVDTGKPQTVALNV
CCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEE
LGSRLSYPKSILLTDDHFSYLANSLGCEAAAIKALSKQETVGKGMWQPDHGFDKNGLPRI
HHHHHCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
LYERHKFYAYTMPDTNKNSKNKPVSPYAKKYPDICNPASGGFGKEGLHQYERFCRAASLD
HHHCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
MEAAAKSSSWGAFQILGEAYDGCGFSSAVDFANQHMKGIDEQVKVFEAFMKNVKPQAVKA
HHHHHCCCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHH
LKDKKWEDVATYYNGGNWRKKNPDYAKNLGDFYASFK
HHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
AHPHHTQHPAGPKAPPSPYVEVTFLFRDTLQKPIEGLTVQIKAGAGAPQAPAWKLGPDG
CCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCC
DDPPATDPASAPAANPSVPMVDNKADALVTDKDGYALTIQNAARNQPIDVLVKNQRGEYV
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCEEEEEECCCCCEE
WKATVTPKKDISAFTIVSPEYHLEATTKLTPTEELQQNLDLPVVQQGEVMTIARLVHDFG
EEEECCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHCCCCCEECCCCHHHHHHHHHHHC
PYIGWSQKVTEQGRVKKDFPEKKKDVTEDPVTHKKKTKITIEHHYKVVDTGKPQTVALNV
CCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEE
LGSRLSYPKSILLTDDHFSYLANSLGCEAAAIKALSKQETVGKGMWQPDHGFDKNGLPRI
HHHHHCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
LYERHKFYAYTMPDTNKNSKNKPVSPYAKKYPDICNPASGGFGKEGLHQYERFCRAASLD
HHHCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
MEAAAKSSSWGAFQILGEAYDGCGFSSAVDFANQHMKGIDEQVKVFEAFMKNVKPQAVKA
HHHHHCCCCCCCEEEHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHH
LKDKKWEDVATYYNGGNWRKKNPDYAKNLGDFYASFK
HHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA