Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is 186476685

Identifier: 186476685

GI number: 186476685

Start: 2172730

End: 2173419

Strand: Reverse

Name: 186476685

Synonym: Bphy_1930

Alternate gene names: NA

Gene position: 2173419-2172730 (Counterclockwise)

Preceding gene: 186476686

Following gene: 186476684

Centisome position: 62.47

GC content: 46.67

Gene sequence:

>690_bases
ATGCGTCGTTTAAATGAATTCATTACCATGATTGTCGCCGCTTTGTCATTTTCGGGTGCGACTAATGCCGCTGATCTGTT
GATTTTTGATTCTCCAAATATGATTATGTTAAAAGATCGGGGGGAGGTGATTGGCTATTACGGTTCGGTCGAGGGTGACA
AGAATTGTGAATTCTTTTTCTATCGGGCTATGAAGTCTTCAGTCAAGGAAGGAGAGTATTCTGGTGCTGGCATAAATTCG
TTCTCCTTTACCTTCCCCCCTAAATCATATCGATACAAGGATCGAGATGGTCGCTTTGATTCGGCAGGGGATGTGTATAG
CCTGCACGACCAGCGGATCGTCCGCATTGACAATCCTGCACCAGGATGCGTCGGCTGGGCAGTTGGTTCGTTTGGAAAGA
GGCCAAGCGACAAAGATGTTGTTCGCTATACTGTCGAGAATAAGATTGAAGCAATTGGTATTCGCGCAATTTCTAAAAAA
TCAGTCTTCTATAAAAGAATCGGCTCACGCTTTGATAGCACGCGGGCGTATCTAGTGACCGGGGATGTGGTGGTCGTTCT
AAAGACTTCGAGCAATTATTCCTATGTACGCTATACGAATCCTGATTCGGCCTCAGAAGGGCGAGTCACAACCGGCTGGG
TCCGTTCCGCTGACCTTGTAGACCCGTTTCCACCAGCGAATAAACAATGA

Upstream 100 bases:

>100_bases
GCTTTAAAGGACAAGAAGTGGGAAGATGTTGCAACTTATTACAACGGCGGGAACTGGCGCAAGAAGAATCCAGACTATGC
AAAGAATTTAGGGGATTTCT

Downstream 100 bases:

>100_bases
TCAATCTCATCCGTCTCGGTGACACCAACGACCACTGCGGCAAAATCATCATCCCGTCAGGCTGCGCAAGGGTGGTCGGA
ACGAATGAACTGGAAGGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MRRLNEFITMIVAALSFSGATNAADLLIFDSPNMIMLKDRGEVIGYYGSVEGDKNCEFFFYRAMKSSVKEGEYSGAGINS
FSFTFPPKSYRYKDRDGRFDSAGDVYSLHDQRIVRIDNPAPGCVGWAVGSFGKRPSDKDVVRYTVENKIEAIGIRAISKK
SVFYKRIGSRFDSTRAYLVTGDVVVVLKTSSNYSYVRYTNPDSASEGRVTTGWVRSADLVDPFPPANKQ

Sequences:

>Translated_229_residues
MRRLNEFITMIVAALSFSGATNAADLLIFDSPNMIMLKDRGEVIGYYGSVEGDKNCEFFFYRAMKSSVKEGEYSGAGINS
FSFTFPPKSYRYKDRDGRFDSAGDVYSLHDQRIVRIDNPAPGCVGWAVGSFGKRPSDKDVVRYTVENKIEAIGIRAISKK
SVFYKRIGSRFDSTRAYLVTGDVVVVLKTSSNYSYVRYTNPDSASEGRVTTGWVRSADLVDPFPPANKQ
>Mature_229_residues
MRRLNEFITMIVAALSFSGATNAADLLIFDSPNMIMLKDRGEVIGYYGSVEGDKNCEFFFYRAMKSSVKEGEYSGAGINS
FSFTFPPKSYRYKDRDGRFDSAGDVYSLHDQRIVRIDNPAPGCVGWAVGSFGKRPSDKDVVRYTVENKIEAIGIRAISKK
SVFYKRIGSRFDSTRAYLVTGDVVVVLKTSSNYSYVRYTNPDSASEGRVTTGWVRSADLVDPFPPANKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25558; Mature: 25558

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLNEFITMIVAALSFSGATNAADLLIFDSPNMIMLKDRGEVIGYYGSVEGDKNCEFFF
CCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCEEEE
YRAMKSSVKEGEYSGAGINSFSFTFPPKSYRYKDRDGRFDSAGDVYSLHDQRIVRIDNPA
EEHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCC
PGCVGWAVGSFGKRPSDKDVVRYTVENKIEAIGIRAISKKSVFYKRIGSRFDSTRAYLVT
CCHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEEEECHHHHHHHHHHCCCCCCEEEEEE
GDVVVVLKTSSNYSYVRYTNPDSASEGRVTTGWVRSADLVDPFPPANKQ
CCEEEEEEECCCCEEEEECCCCCCCCCCEEECEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRRLNEFITMIVAALSFSGATNAADLLIFDSPNMIMLKDRGEVIGYYGSVEGDKNCEFFF
CCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCEEEE
YRAMKSSVKEGEYSGAGINSFSFTFPPKSYRYKDRDGRFDSAGDVYSLHDQRIVRIDNPA
EEHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCC
PGCVGWAVGSFGKRPSDKDVVRYTVENKIEAIGIRAISKKSVFYKRIGSRFDSTRAYLVT
CCHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEEEECHHHHHHHHHHCCCCCCEEEEEE
GDVVVVLKTSSNYSYVRYTNPDSASEGRVTTGWVRSADLVDPFPPANKQ
CCEEEEEEECCCCEEEEECCCCCCCCCCEEECEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA