| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is 186476643
Identifier: 186476643
GI number: 186476643
Start: 2145888
End: 2146133
Strand: Reverse
Name: 186476643
Synonym: Bphy_1888
Alternate gene names: NA
Gene position: 2146133-2145888 (Counterclockwise)
Preceding gene: 186476644
Following gene: 186476642
Centisome position: 61.68
GC content: 56.91
Gene sequence:
>246_bases ATGGCAATCACGGATGGAATGAGCACTGCGGACATGCAGTCGCGGTTGGCCGCGCTTCAGGCGGCCTACTTCGATCTGTC CTCGGGCGCGAAGATCGTGACTGCCACCTACAACCAGGGCGACGGCACGAAGTCGGTCACGTATCAGCAAAGCGACATCA CGCAGATTCGCAAAGCCATCGAGATGCTGCAAATGGCTCTCGGAATCATCTGTAACTATCCACGCGCACGCAGGGTTCTT TTCTGA
Upstream 100 bases:
>100_bases CAAGCCGAGCAGGCAGTTCCGCAGGCCGCGCCGGCGGCATCACAGATCGAAGTTAAACCCGTCAGGAAGAAGCTGACGAA CCGCCTCGCATAGGAAAGAA
Downstream 100 bases:
>100_bases TGACACTCATCGTCGATTCCACCGGCAAGCCGTTCGCGGATCTGCCGGCAGGGGGGCGTGCGCGCGCAGATTCTGGATGG GGCGGCCCGGGCATCACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MAITDGMSTADMQSRLAALQAAYFDLSSGAKIVTATYNQGDGTKSVTYQQSDITQIRKAIEMLQMALGIICNYPRARRVL F
Sequences:
>Translated_81_residues MAITDGMSTADMQSRLAALQAAYFDLSSGAKIVTATYNQGDGTKSVTYQQSDITQIRKAIEMLQMALGIICNYPRARRVL F >Mature_80_residues AITDGMSTADMQSRLAALQAAYFDLSSGAKIVTATYNQGDGTKSVTYQQSDITQIRKAIEMLQMALGIICNYPRARRVLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8882; Mature: 8751
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAITDGMSTADMQSRLAALQAAYFDLSSGAKIVTATYNQGDGTKSVTYQQSDITQIRKAI CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEECHHHHHHHHHHH EMLQMALGIICNYPRARRVLF HHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AITDGMSTADMQSRLAALQAAYFDLSSGAKIVTATYNQGDGTKSVTYQQSDITQIRKAI CCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEECHHHHHHHHHHH EMLQMALGIICNYPRARRVLF HHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA