| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476597
Identifier: 186476597
GI number: 186476597
Start: 2107706
End: 2107867
Strand: Direct
Name: 186476597
Synonym: Bphy_1842
Alternate gene names: NA
Gene position: 2107706-2107867 (Clockwise)
Preceding gene: 186476596
Following gene: 186476601
Centisome position: 60.58
GC content: 51.23
Gene sequence:
>162_bases ATGCTTCGATACGCTGCCATCTTCTTCGTCATTGCCATTATTGCCGCCGTCTTCGGATTCGGTGGCATTGCCTCAGGCGC TGCTGAAATAGCGAAGGTGCTGTTCTTTATCTTTATCGTGATCTTTCTCGTCACGCTGCTCATGGGCGTGATCAGACGCT GA
Upstream 100 bases:
>100_bases CATGCCGTGACGGCGGCGCCTGTGTCTGCCGACGCGGTTTCCGCGCCCGAGGATCGTTCATTGCATCGATCCGTTCAGTC ATACTTCGATGGAGGATTCC
Downstream 100 bases:
>100_bases AACTGCGGGCAAAGCCATCGCTGAGCGAGGGGACGCGCGCTGGGCCGCGCGTTCGCTTGCAATCGCTCTGGCGGCCGGTT CAGGCGCCCGCGCGGATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 53; Mature: 53
Protein sequence:
>53_residues MLRYAAIFFVIAIIAAVFGFGGIASGAAEIAKVLFFIFIVIFLVTLLMGVIRR
Sequences:
>Translated_53_residues MLRYAAIFFVIAIIAAVFGFGGIASGAAEIAKVLFFIFIVIFLVTLLMGVIRR >Mature_53_residues MLRYAAIFFVIAIIAAVFGFGGIASGAAEIAKVLFFIFIVIFLVTLLMGVIRR
Specific function: Unknown
COG id: COG5487
COG function: function code S; Small integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0391 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009760 [H]
Pfam domain/function: PF07043 DUF1328 [H]
EC number: NA
Molecular weight: Translated: 5752; Mature: 5752
Theoretical pI: Translated: 11.44; Mature: 11.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRYAAIFFVIAIIAAVFGFGGIASGAAEIAKVLFFIFIVIFLVTLLMGVIRR CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLRYAAIFFVIAIIAAVFGFGGIASGAAEIAKVLFFIFIVIFLVTLLMGVIRR CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA