| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is glgA [H]
Identifier: 186476556
GI number: 186476556
Start: 2055160
End: 2056620
Strand: Direct
Name: glgA [H]
Synonym: Bphy_1798
Alternate gene names: 186476556
Gene position: 2055160-2056620 (Clockwise)
Preceding gene: 186476555
Following gene: 186476557
Centisome position: 59.07
GC content: 67.08
Gene sequence:
>1461_bases ATGACGATCCGCGCACTGCATGTCGCAAGCGAACTGTATCCCCTTCTGAAAACGGGCGGTCTTGCCGATGTGGTGGGGGC GCTGCCGCCCGCGCTGATCGAATTGGGCGCCGATGTGCGCGTGCTGCTGCCCGGCTTTCCGGCTGTGGTTGCCGGGCTGT CGGATCTGGAGCCGGTGGCGCGGATCGGCGAGCGTTTCGGCGCATCGAACGTGACGCTGGCGCGCGGCACGCTGCCCGCC AACGGGCTGCTCGTCTATGTGATCCGCGCGGAAACGCTGTATGACCGCAGCGGCAATCCGTACCTCGACGCCGAACACGT GCCGTACGGCGACAACGCGCAACGCTTCGCAATGCTCGGCTGGATTGCCGCGCAACTCGCCCAGCATCTCGACCCGGCCT GGGCGCCGCAGATCGTCCATGCACACGACTGGCACGCGGGCCTCGCGCCCGCCTATCTGAAAGCGGCCGCGCGCGAGCAC GGCAAGCCGCCCGCACGCACGATCTTCACGGTCCATAACCTCGCGTACCAGGGCATCTTTCCGGCGCACCAGTTCGGCCA GCTGGGACTGCCCGCCGATTTCTTCCACATGAGCGGCGTCGAGTTCTACGGACAGATGTCGTTTCTGAAGGCAGGACTCT TTTACAGCGACCGGATCACGACGGTGAGCCCCACGTATGCGCGCGAGATCCAGACGCTCGCGCAAGGCGGCGGGCTGGAT GGACTGCTGAGCCAGCGCTCGCACGATCTGTCTGGCATCCTGAACGGCGTCGACTACACGGTATGGCAGCCGTCGGTCGA TCAGCTGATCGCCGCGCGCTACACCGACACCCGCCTCGCCGGCAAGCGCGCGTGCAAGACGGCGCTGCAGGAGCGCTTCC ACCTCGCGGCGAAGAGCGATGCGCTGCTGTTCGGCGTGGTGAGCCGGCTAACGGAGCAGAAAGGCCTCGATCTGCTGCTG GCCGCGTTGCCCGAGATCATCAAGCGCGGCGGGCAACTGGTCGTATTCGGCACGGGCGACCCCGCGCTCGAGAACGGCCT GCAGCGTGTCGCACAGGCGCATCCCGAGAGCGTCGCCGTAGAGCTCGGTTTCGACGAAACGCTTGCGCATCAGATCGTCG CGGGCAGCGACGTGATTGCAGTGCCGTCGCGCTTCGAGCCGTGCGGCCTGACGCAGTTGTACGCGCTCGCGTATGGCGCG CTGCCGCTCGTGCATCGTGTAGGCGGCCTCGCCGACACCGTTGTGGACGCGTCGCTCGAAAACATCGCCGACGATCTCGC AACAGGCTTCGTGTTCGAGCGCTTCGAGCCGGAAGCGTTGACGGCTGCGATCCGGCGCGCCTTTGCGCTGTACGCGCGGC GTACCGACTGGAAGGCGGCGCAGCGCCGCGCGATGCGGCAGGACTTCGGCTGGGGCGCGTCGGCGGAACGCTATCTCGCG CTCTATCGCGAGCTGGTGTGA
Upstream 100 bases:
>100_bases CCACGCTTTGGCAAGGCCCACGCGCTTCGACGCACGGGCCTCCCTGGCGACACCTGCGCGGCAACCCTTAACCCAACCTT CAACGACAGGATTCAGGCCC
Downstream 100 bases:
>100_bases GCTCGCGCGCGCTCGATCCTCCGCGTCATGGCGCGCGCTTTGATGGGTCGGCGCAACACGACGAGGCGGGATCGATTCCG CCGCGCGAAATCTCATGTAT
Product: glycogen synthase
Products: NA
Alternate protein names: Starch [bacterial glycogen] synthase [H]
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MTIRALHVASELYPLLKTGGLADVVGALPPALIELGADVRVLLPGFPAVVAGLSDLEPVARIGERFGASNVTLARGTLPA NGLLVYVIRAETLYDRSGNPYLDAEHVPYGDNAQRFAMLGWIAAQLAQHLDPAWAPQIVHAHDWHAGLAPAYLKAAAREH GKPPARTIFTVHNLAYQGIFPAHQFGQLGLPADFFHMSGVEFYGQMSFLKAGLFYSDRITTVSPTYAREIQTLAQGGGLD GLLSQRSHDLSGILNGVDYTVWQPSVDQLIAARYTDTRLAGKRACKTALQERFHLAAKSDALLFGVVSRLTEQKGLDLLL AALPEIIKRGGQLVVFGTGDPALENGLQRVAQAHPESVAVELGFDETLAHQIVAGSDVIAVPSRFEPCGLTQLYALAYGA LPLVHRVGGLADTVVDASLENIADDLATGFVFERFEPEALTAAIRRAFALYARRTDWKAAQRRAMRQDFGWGASAERYLA LYRELV
Sequences:
>Translated_486_residues MTIRALHVASELYPLLKTGGLADVVGALPPALIELGADVRVLLPGFPAVVAGLSDLEPVARIGERFGASNVTLARGTLPA NGLLVYVIRAETLYDRSGNPYLDAEHVPYGDNAQRFAMLGWIAAQLAQHLDPAWAPQIVHAHDWHAGLAPAYLKAAAREH GKPPARTIFTVHNLAYQGIFPAHQFGQLGLPADFFHMSGVEFYGQMSFLKAGLFYSDRITTVSPTYAREIQTLAQGGGLD GLLSQRSHDLSGILNGVDYTVWQPSVDQLIAARYTDTRLAGKRACKTALQERFHLAAKSDALLFGVVSRLTEQKGLDLLL AALPEIIKRGGQLVVFGTGDPALENGLQRVAQAHPESVAVELGFDETLAHQIVAGSDVIAVPSRFEPCGLTQLYALAYGA LPLVHRVGGLADTVVDASLENIADDLATGFVFERFEPEALTAAIRRAFALYARRTDWKAAQRRAMRQDFGWGASAERYLA LYRELV >Mature_485_residues TIRALHVASELYPLLKTGGLADVVGALPPALIELGADVRVLLPGFPAVVAGLSDLEPVARIGERFGASNVTLARGTLPAN GLLVYVIRAETLYDRSGNPYLDAEHVPYGDNAQRFAMLGWIAAQLAQHLDPAWAPQIVHAHDWHAGLAPAYLKAAAREHG KPPARTIFTVHNLAYQGIFPAHQFGQLGLPADFFHMSGVEFYGQMSFLKAGLFYSDRITTVSPTYAREIQTLAQGGGLDG LLSQRSHDLSGILNGVDYTVWQPSVDQLIAARYTDTRLAGKRACKTALQERFHLAAKSDALLFGVVSRLTEQKGLDLLLA ALPEIIKRGGQLVVFGTGDPALENGLQRVAQAHPESVAVELGFDETLAHQIVAGSDVIAVPSRFEPCGLTQLYALAYGAL PLVHRVGGLADTVVDASLENIADDLATGFVFERFEPEALTAAIRRAFALYARRTDWKAAQRRAMRQDFGWGASAERYLAL YRELV
Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose [H]
COG id: COG0297
COG function: function code G; Glycogen synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789836, Length=485, Percent_Identity=54.020618556701, Blast_Score=502, Evalue=1e-143,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011835 - InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.21 [H]
Molecular weight: Translated: 52607; Mature: 52476
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRALHVASELYPLLKTGGLADVVGALPPALIELGADVRVLLPGFPAVVAGLSDLEPVA CCEEHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHCCCCCEEECCCHHHHHHCHHCHHHHH RIGERFGASNVTLARGTLPANGLLVYVIRAETLYDRSGNPYLDAEHVPYGDNAQRFAMLG HHHHHHCCCCEEEEECCCCCCCEEEEEEEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH WIAAQLAQHLDPAWAPQIVHAHDWHAGLAPAYLKAAAREHGKPPARTIFTVHNLAYQGIF HHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCHHHEEHHHHHHHHCCC PAHQFGQLGLPADFFHMSGVEFYGQMSFLKAGLFYSDRITTVSPTYAREIQTLAQGGGLD CHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHCCCCH GLLSQRSHDLSGILNGVDYTVWQPSVDQLIAARYTDTRLAGKRACKTALQERFHLAAKSD HHHHHCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ALLFGVVSRLTEQKGLDLLLAALPEIIKRGGQLVVFGTGDPALENGLQRVAQAHPESVAV HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEE ELGFDETLAHQIVAGSDVIAVPSRFEPCGLTQLYALAYGALPLVHRVGGLADTVVDASLE EECCCHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH NIADDLATGFVFERFEPEALTAAIRRAFALYARRTDWKAAQRRAMRQDFGWGASAERYLA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHH LYRELV HHHHHC >Mature Secondary Structure TIRALHVASELYPLLKTGGLADVVGALPPALIELGADVRVLLPGFPAVVAGLSDLEPVA CEEHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHCCCCCEEECCCHHHHHHCHHCHHHHH RIGERFGASNVTLARGTLPANGLLVYVIRAETLYDRSGNPYLDAEHVPYGDNAQRFAMLG HHHHHHCCCCEEEEECCCCCCCEEEEEEEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH WIAAQLAQHLDPAWAPQIVHAHDWHAGLAPAYLKAAAREHGKPPARTIFTVHNLAYQGIF HHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCHHHEEHHHHHHHHCCC PAHQFGQLGLPADFFHMSGVEFYGQMSFLKAGLFYSDRITTVSPTYAREIQTLAQGGGLD CHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHCCCCH GLLSQRSHDLSGILNGVDYTVWQPSVDQLIAARYTDTRLAGKRACKTALQERFHLAAKSD HHHHHCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ALLFGVVSRLTEQKGLDLLLAALPEIIKRGGQLVVFGTGDPALENGLQRVAQAHPESVAV HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEE ELGFDETLAHQIVAGSDVIAVPSRFEPCGLTQLYALAYGALPLVHRVGGLADTVVDASLE EECCCHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH NIADDLATGFVFERFEPEALTAAIRRAFALYARRTDWKAAQRRAMRQDFGWGASAERYLA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHH LYRELV HHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA