| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is 186476515
Identifier: 186476515
GI number: 186476515
Start: 2007381
End: 2007851
Strand: Reverse
Name: 186476515
Synonym: Bphy_1757
Alternate gene names: NA
Gene position: 2007851-2007381 (Counterclockwise)
Preceding gene: 186476518
Following gene: 186476514
Centisome position: 57.71
GC content: 66.24
Gene sequence:
>471_bases ATGACCAGCATGAAACCACTTTCACGTCATCCGCTGATCCGCTCGACGATCTTCGCCGCCGCGCTGCTCGCAGGCCTCGC TGCCTGCCAGAAGAACGATGCATCGGCGGGCCAGACGCCCCCGAAGCTCGACGACGTCGCCCAGCAAGCCAGCCAGAAAC TCGATCAGGCCGCGAGTTATGTCGGCGCACAGGTGGACGCCGCGAAGGCGACCGCGCAACAGAATCTCGATGCGGCCGCG TCCGGCCCGACCATCAATGTCAGCCCGGGCGATCTCGCGTCGCAGGCGCAGGCCAATCTGCAAGGCGCGGCCAGCGCGAC AAACGCCGCCGTCAACAAGGCGGTGAGTTCGACGGGCGCGGGCCTCGAATCGGCGGGGCGCAAGCTGCAGCAATGGTCGA GCGAGGCATCGACGAACTCGCAGTCCGCACCATCCGACGCGGGCGACGCCCAGAAGCAGATGGACAAATAA
Upstream 100 bases:
>100_bases TGTTCCCGTCGCGCGATGCGTCGCACACGGAGGCGCCCAGGACGCGCAACAGCGTATCATTGAGGCGTTTTCGCAAGACG AAGCCGCTCGATGCGGCTCA
Downstream 100 bases:
>100_bases GTGTGCGCTTGACCGGCGTGCTAAGTGTAACTATGATGATTACACATCGCCGCCGGGACGTAGTGTGCGTCTCATGCGTA TCGGATGGTCCCGCGCTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTSMKPLSRHPLIRSTIFAAALLAGLAACQKNDASAGQTPPKLDDVAQQASQKLDQAASYVGAQVDAAKATAQQNLDAAA SGPTINVSPGDLASQAQANLQGAASATNAAVNKAVSSTGAGLESAGRKLQQWSSEASTNSQSAPSDAGDAQKQMDK
Sequences:
>Translated_156_residues MTSMKPLSRHPLIRSTIFAAALLAGLAACQKNDASAGQTPPKLDDVAQQASQKLDQAASYVGAQVDAAKATAQQNLDAAA SGPTINVSPGDLASQAQANLQGAASATNAAVNKAVSSTGAGLESAGRKLQQWSSEASTNSQSAPSDAGDAQKQMDK >Mature_155_residues TSMKPLSRHPLIRSTIFAAALLAGLAACQKNDASAGQTPPKLDDVAQQASQKLDQAASYVGAQVDAAKATAQQNLDAAAS GPTINVSPGDLASQAQANLQGAASATNAAVNKAVSSTGAGLESAGRKLQQWSSEASTNSQSAPSDAGDAQKQMDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15650; Mature: 15519
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSMKPLSRHPLIRSTIFAAALLAGLAACQKNDASAGQTPPKLDDVAQQASQKLDQAASY CCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VGAQVDAAKATAQQNLDAAASGPTINVSPGDLASQAQANLQGAASATNAAVNKAVSSTGA HHHHHHHHHHHHHHCCCHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLESAGRKLQQWSSEASTNSQSAPSDAGDAQKQMDK CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure TSMKPLSRHPLIRSTIFAAALLAGLAACQKNDASAGQTPPKLDDVAQQASQKLDQAASY CCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VGAQVDAAKATAQQNLDAAASGPTINVSPGDLASQAQANLQGAASATNAAVNKAVSSTGA HHHHHHHHHHHHHHCCCHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLESAGRKLQQWSSEASTNSQSAPSDAGDAQKQMDK CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA