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The map label for this gene is ywnA [H]

Identifier: 186476514

GI number: 186476514

Start: 2006822

End: 2007316

Strand: Reverse

Name: ywnA [H]

Synonym: Bphy_1756

Alternate gene names: 186476514

Gene position: 2007316-2006822 (Counterclockwise)

Preceding gene: 186476515

Following gene: 186476513

Centisome position: 57.69

GC content: 65.86

Gene sequence:

>495_bases
GTGCGTCTCATGCGTATCGGATGGTCCCGCGCTGTGAATACGAGTAGCCGATTTGCCTTTGCGGTTCATGTGCTCGCCTT
GCTGTCGTTGCAGGAAGGCGTGCCGTTGTCGTCGGACCTGATCGCGGGAAGCGTGAACACGAATCCGGTGTTGATCCGGC
GCCTGCTGGCGATGCTCGCCGAAGCGGGCCTGACCTCATCGCAATTGGGCGCGGGCGGCGGCGCGCTGCTCGCGCGCCAG
CCGGAAGACATCACGCTGCTCGACATCTACCGCGCCGTCGACGATGCGCAACTGTTTGCAATGCATCGCGAAACGCCGAA
TCCCGCCTGCATGGTCGGCCGCAACATCCAGACCGTGCTGACGGGCATCATCGGCGATGCGCAGCAGGCGCTCGAAGCGT
CGCTGGCGTCGCGCACGCTAGCGGACGCGACAGCGGACGTCGTGCGCGCCGAACGTTCGCGCGAACGCAAGCGCAAAGCG
GCGGCGGACGGTTGA

Upstream 100 bases:

>100_bases
GACGCGGGCGACGCCCAGAAGCAGATGGACAAATAAGTGTGCGCTTGACCGGCGTGCTAAGTGTAACTATGATGATTACA
CATCGCCGCCGGGACGTAGT

Downstream 100 bases:

>100_bases
ACGCAGCAGCATGCGCAAGCACGGGGCGGGCGCCCCGTCTTTTTTTAACCAAATATGTAATCGATATAGTTACATTTAAG
CGGAAGGAACATTGTCATGA

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MRLMRIGWSRAVNTSSRFAFAVHVLALLSLQEGVPLSSDLIAGSVNTNPVLIRRLLAMLAEAGLTSSQLGAGGGALLARQ
PEDITLLDIYRAVDDAQLFAMHRETPNPACMVGRNIQTVLTGIIGDAQQALEASLASRTLADATADVVRAERSRERKRKA
AADG

Sequences:

>Translated_164_residues
MRLMRIGWSRAVNTSSRFAFAVHVLALLSLQEGVPLSSDLIAGSVNTNPVLIRRLLAMLAEAGLTSSQLGAGGGALLARQ
PEDITLLDIYRAVDDAQLFAMHRETPNPACMVGRNIQTVLTGIIGDAQQALEASLASRTLADATADVVRAERSRERKRKA
AADG
>Mature_164_residues
MRLMRIGWSRAVNTSSRFAFAVHVLALLSLQEGVPLSSDLIAGSVNTNPVLIRRLLAMLAEAGLTSSQLGAGGGALLARQ
PEDITLLDIYRAVDDAQLFAMHRETPNPACMVGRNIQTVLTGIIGDAQQALEASLASRTLADATADVVRAERSRERKRKA
AADG

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17463; Mature: 17463

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLMRIGWSRAVNTSSRFAFAVHVLALLSLQEGVPLSSDLIAGSVNTNPVLIRRLLAMLA
CCCEECCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCCCHHHHHHHHHHHH
EAGLTSSQLGAGGGALLARQPEDITLLDIYRAVDDAQLFAMHRETPNPACMVGRNIQTVL
HCCCCCHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHH
TGIIGDAQQALEASLASRTLADATADVVRAERSRERKRKAAADG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRLMRIGWSRAVNTSSRFAFAVHVLALLSLQEGVPLSSDLIAGSVNTNPVLIRRLLAMLA
CCCEECCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCCCHHHHHHHHHHHH
EAGLTSSQLGAGGGALLARQPEDITLLDIYRAVDDAQLFAMHRETPNPACMVGRNIQTVL
HCCCCCHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHH
TGIIGDAQQALEASLASRTLADATADVVRAERSRERKRKAAADG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]