| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476494
Identifier: 186476494
GI number: 186476494
Start: 1982880
End: 1983278
Strand: Direct
Name: 186476494
Synonym: Bphy_1736
Alternate gene names: NA
Gene position: 1982880-1983278 (Clockwise)
Preceding gene: 186476484
Following gene: 186476495
Centisome position: 56.99
GC content: 67.67
Gene sequence:
>399_bases ATGGTGTTCGACGATTTGAGAGACAACGAGTGGGCGCTGGTGGAGGCGTTGTTCTGTGCAGAGCCGGCACGGAGCGAACG CCGTGGTCGACCACGCGTCGAAGCTCGCGCGGTAGTCAACGCCGTGTTGTGGGTTTTGTCGACGGGCGAGGGCTGGTCCA AGCTGCCGGGCCGTTATCCGTCGCCCCCGACGTGCCGTCGTCGTTTCGACGAATGGCAGGCCGACGGCACGCTGGCTGAG ATAGTCAAACGGCTCGGCACGAGCGGCCGCGAGATTTCGCTGCGCGGGCGCATCGGCGCAACGGCGGCCAAACCGCCCGC ACCGCCGAGCCGCGACCGTCTGCGCGGCGCGTTCTGGACCAATCCGGAATCGTGGCGGGCGCCCGTCAAGATGGCCTGA
Upstream 100 bases:
>100_bases ATAGGCCGACTCTCCGCCGGCGCCCGATAGGATTCGGGCGCGTGAAGAGTGCGCAGCGCGGGGCAGCGCACCGGAGTTAG CTTCGCTGAGGTGAAACATG
Downstream 100 bases:
>100_bases CCATGCACTCTACGCTTCCGGGCGCCCAAGGGCGCCCGGCGCGTTTTTGAGGCCGGCAACCGCCCGGCCCACTTTCCCGC CTCGTGCATTTGCCTCGTTC
Product: putative transposase A protein
Products: NA
Alternate protein names: Transposase Protein; Transposase; IS5 Family Transposase OrfA; ISAca3 Transposase OrfA
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MVFDDLRDNEWALVEALFCAEPARSERRGRPRVEARAVVNAVLWVLSTGEGWSKLPGRYPSPPTCRRRFDEWQADGTLAE IVKRLGTSGREISLRGRIGATAAKPPAPPSRDRLRGAFWTNPESWRAPVKMA
Sequences:
>Translated_132_residues MVFDDLRDNEWALVEALFCAEPARSERRGRPRVEARAVVNAVLWVLSTGEGWSKLPGRYPSPPTCRRRFDEWQADGTLAE IVKRLGTSGREISLRGRIGATAAKPPAPPSRDRLRGAFWTNPESWRAPVKMA >Mature_132_residues MVFDDLRDNEWALVEALFCAEPARSERRGRPRVEARAVVNAVLWVLSTGEGWSKLPGRYPSPPTCRRRFDEWQADGTLAE IVKRLGTSGREISLRGRIGATAAKPPAPPSRDRLRGAFWTNPESWRAPVKMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14828; Mature: 14828
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFDDLRDNEWALVEALFCAEPARSERRGRPRVEARAVVNAVLWVLSTGEGWSKLPGRYP CCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCC SPPTCRRRFDEWQADGTLAEIVKRLGTSGREISLRGRIGATAAKPPAPPSRDRLRGAFWT CCHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCC NPESWRAPVKMA CCHHCCCCCCCC >Mature Secondary Structure MVFDDLRDNEWALVEALFCAEPARSERRGRPRVEARAVVNAVLWVLSTGEGWSKLPGRYP CCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCC SPPTCRRRFDEWQADGTLAEIVKRLGTSGREISLRGRIGATAAKPPAPPSRDRLRGAFWT CCHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCC NPESWRAPVKMA CCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA