| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476450
Identifier: 186476450
GI number: 186476450
Start: 1926576
End: 1927103
Strand: Reverse
Name: 186476450
Synonym: Bphy_1692
Alternate gene names: NA
Gene position: 1927103-1926576 (Counterclockwise)
Preceding gene: 186476451
Following gene: 186476449
Centisome position: 55.39
GC content: 61.17
Gene sequence:
>528_bases GTGAGCCTGAACGCAAGCATATGTGCGCTCGCTCACATATATGCATCGAGCCGCCCTCTGCAGGAGGTGCTGTTCGAGCG CCACAACGACATGATGCCGCCTGGACAGTCCGGCATCACGGCGACGCCAGACACACTCTCAAAGCTCGTCGCAAGACACT TCCCGTTTCCGACCATCAGGCCGCAGCGAATTCAACCCCTTCGGACACGCGTTGCGTGCGCTCGCGCACGCAACGTGCAA GGTTGTCACCGCATCGGATCGGGCGACGCCAAAGCGGGATCAGGCGATCGCGAACCATTGGTGGGATTTCGCACGGAATC GCTGCTCCCGTCCCCGTACCTTATCGATGTGATTTGCGCATTGCCGCTCTGCATGAATGGTGGACAGCGACATCACAGGG GACCGCGCAGAGTGGGCGCGCGCGAAAGAGAAAGCGGAAACGTCCAGCAGAAAGCGCACAGCAGGGCTGCTGCCGGACAC GATCGCTTTCGCGATGCGAGGGAAGACCATGCGAACGGCTGCGGCTAA
Upstream 100 bases:
>100_bases CACTGATGCTACGGCGCACTTCGGTTTTCCCGCAAGTCGTTAAGATTCCCAGGCGAAAGTACGGCGGGCGCGCCAGCCAG ATCGCGCGCGCGCGATCGTA
Downstream 100 bases:
>100_bases ACATCGACCATTGAACGCGACGCAGTGGGGTAGGAATATGTCCGAGCTGGTGCATCGTGCGATCGATATCGCGCTAATTG TGCTGGGCGCTTTCGGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSLNASICALAHIYASSRPLQEVLFERHNDMMPPGQSGITATPDTLSKLVARHFPFPTIRPQRIQPLRTRVACARARNVQ GCHRIGSGDAKAGSGDREPLVGFRTESLLPSPYLIDVICALPLCMNGGQRHHRGPRRVGARERESGNVQQKAHSRAAAGH DRFRDAREDHANGCG
Sequences:
>Translated_175_residues MSLNASICALAHIYASSRPLQEVLFERHNDMMPPGQSGITATPDTLSKLVARHFPFPTIRPQRIQPLRTRVACARARNVQ GCHRIGSGDAKAGSGDREPLVGFRTESLLPSPYLIDVICALPLCMNGGQRHHRGPRRVGARERESGNVQQKAHSRAAAGH DRFRDAREDHANGCG >Mature_174_residues SLNASICALAHIYASSRPLQEVLFERHNDMMPPGQSGITATPDTLSKLVARHFPFPTIRPQRIQPLRTRVACARARNVQG CHRIGSGDAKAGSGDREPLVGFRTESLLPSPYLIDVICALPLCMNGGQRHHRGPRRVGARERESGNVQQKAHSRAAAGHD RFRDAREDHANGCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19160; Mature: 19029
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNASICALAHIYASSRPLQEVLFERHNDMMPPGQSGITATPDTLSKLVARHFPFPTIR CCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC PQRIQPLRTRVACARARNVQGCHRIGSGDAKAGSGDREPLVGFRTESLLPSPYLIDVICA HHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHH LPLCMNGGQRHHRGPRRVGARERESGNVQQKAHSRAAAGHDRFRDAREDHANGCG HHHHHCCCHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SLNASICALAHIYASSRPLQEVLFERHNDMMPPGQSGITATPDTLSKLVARHFPFPTIR CCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC PQRIQPLRTRVACARARNVQGCHRIGSGDAKAGSGDREPLVGFRTESLLPSPYLIDVICA HHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHH LPLCMNGGQRHHRGPRRVGARERESGNVQQKAHSRAAAGHDRFRDAREDHANGCG HHHHHCCCHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA