| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is amsG [H]
Identifier: 186476449
GI number: 186476449
Start: 1925465
End: 1926595
Strand: Reverse
Name: amsG [H]
Synonym: Bphy_1691
Alternate gene names: 186476449
Gene position: 1926595-1925465 (Counterclockwise)
Preceding gene: 186476450
Following gene: 186476448
Centisome position: 55.37
GC content: 62.25
Gene sequence:
>1131_bases ATGCGAACGGCTGCGGCTAAACATCGACCATTGAACGCGACGCAGTGGGGTAGGAATATGTCCGAGCTGGTGCATCGTGC GATCGATATCGCGCTAATTGTGCTGGGCGCTTTCGGCGCATTGCACTTGAACCTGAGCTTCAACGTGGCCGCAGTGGGTC CTGCGCACCAGCTCGACCCGACGCTCGTCGCGTTCGTCGCCGCGCTCGCGTTATCGGTGTTTCCAGCGTGTGGAACCTAT CCGCCGCGAGGACGGCATCCCGTCGCGAGCGTCGCCGGCCGCACGGCATTTGCATGGCTCGCCGTGCAACTCTGCGGGCT GGCTTTGCTTTATGCAATTCATCGCGACAACGTGATTTCCATGCCGTGGTTCATCTACTGGACACTGACCACAGGCATTT CGCTGCTCGCCTCGCATACGCTTTTCTTCGCGCAGTTCAGCGTGGCCCGGCAGGCCACCGCATGGCTCGGACGCGGGGAC ACGGACCACGATCTGGCCGAAACCGAACCGCACACGGGCTCGATCAGACATGCTGTCAAGCGGGCCTTCGACATCACGCT CGGCCTGACCATGATCCTCGCGCTGTTGCCGTTGCTCGCGCTGGTTGCGCTGGTCGTGAAGCTGGACGGTGGTCCGTCGA TATACGGCCATACACGCGTGGGCCGCAATGGCGAAAAGTTTCGCTGCCTCAAGTTTCGCTCGATGGTGGTCAACTCGCAG CAGGTGCTCGACGAGTTGCTCGCGAGCGATCCCGTGGCACGCGCCGAGTGGGAGCGTGAGTTCAAGCTCAAGAACGACGT GCGCGTGACGCGCATCGGCCATTTCCTGCGCCGCACGAGCCTCGATGAACTGCCGCAGCTCTGGAACGTGGTGCGCGGCG AGATGAGCCTCGTCGGCCCACGGCCGATCACCGCGCAGGAACTGGAGCGCTATGGCGCGCACAGCAAGTACTACCTGATG GCAACGCCTGGCATCACAGGACTGTGGCAGGTGAGCGGACGCTGCGAGACCGACTACGCGACGCGCGTCATGCTCGACGT GAAGTACGTGACGAACTGGTCGCTGCGCGCCGACATCGGGATTCTCTTCAAGACGTTCTTTGTGGTGATCAAAGGGAACG GGGCGTATTGA
Upstream 100 bases:
>100_bases AGAGTGGGCGCGCGCGAAAGAGAAAGCGGAAACGTCCAGCAGAAAGCGCACAGCAGGGCTGCTGCCGGACACGATCGCTT TCGCGATGCGAGGGAAGACC
Downstream 100 bases:
>100_bases CGTTGAACGCTGTGGAGATCGTGATCTGAACGTCGCTTGCGGCACGAGACGGCACGAGACGGCACAAGACGGCACGAGGC GAGACGGCAGGGCATTGGCA
Product: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MRTAAAKHRPLNATQWGRNMSELVHRAIDIALIVLGAFGALHLNLSFNVAAVGPAHQLDPTLVAFVAALALSVFPACGTY PPRGRHPVASVAGRTAFAWLAVQLCGLALLYAIHRDNVISMPWFIYWTLTTGISLLASHTLFFAQFSVARQATAWLGRGD TDHDLAETEPHTGSIRHAVKRAFDITLGLTMILALLPLLALVALVVKLDGGPSIYGHTRVGRNGEKFRCLKFRSMVVNSQ QVLDELLASDPVARAEWEREFKLKNDVRVTRIGHFLRRTSLDELPQLWNVVRGEMSLVGPRPITAQELERYGAHSKYYLM ATPGITGLWQVSGRCETDYATRVMLDVKYVTNWSLRADIGILFKTFFVVIKGNGAY
Sequences:
>Translated_376_residues MRTAAAKHRPLNATQWGRNMSELVHRAIDIALIVLGAFGALHLNLSFNVAAVGPAHQLDPTLVAFVAALALSVFPACGTY PPRGRHPVASVAGRTAFAWLAVQLCGLALLYAIHRDNVISMPWFIYWTLTTGISLLASHTLFFAQFSVARQATAWLGRGD TDHDLAETEPHTGSIRHAVKRAFDITLGLTMILALLPLLALVALVVKLDGGPSIYGHTRVGRNGEKFRCLKFRSMVVNSQ QVLDELLASDPVARAEWEREFKLKNDVRVTRIGHFLRRTSLDELPQLWNVVRGEMSLVGPRPITAQELERYGAHSKYYLM ATPGITGLWQVSGRCETDYATRVMLDVKYVTNWSLRADIGILFKTFFVVIKGNGAY >Mature_376_residues MRTAAAKHRPLNATQWGRNMSELVHRAIDIALIVLGAFGALHLNLSFNVAAVGPAHQLDPTLVAFVAALALSVFPACGTY PPRGRHPVASVAGRTAFAWLAVQLCGLALLYAIHRDNVISMPWFIYWTLTTGISLLASHTLFFAQFSVARQATAWLGRGD TDHDLAETEPHTGSIRHAVKRAFDITLGLTMILALLPLLALVALVVKLDGGPSIYGHTRVGRNGEKFRCLKFRSMVVNSQ QVLDELLASDPVARAEWEREFKLKNDVRVTRIGHFLRRTSLDELPQLWNVVRGEMSLVGPRPITAQELERYGAHSKYYLM ATPGITGLWQVSGRCETDYATRVMLDVKYVTNWSLRADIGILFKTFFVVIKGNGAY
Specific function: Involved in the biosynthesis of amylovoran which functions as a virulence factor. May act as a sugar transferase and may be involved in the export of the repeating unit by flipping the lipid carrier to the periplasmic face of the inner membrane [H]
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=217, Percent_Identity=39.63133640553, Blast_Score=132, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 - InterPro: IPR017472 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 41628; Mature: 41628
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTAAAKHRPLNATQWGRNMSELVHRAIDIALIVLGAFGALHLNLSFNVAAVGPAHQLDP CCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEECCCCCCCCH TLVAFVAALALSVFPACGTYPPRGRHPVASVAGRTAFAWLAVQLCGLALLYAIHRDNVIS HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEC MPWFIYWTLTTGISLLASHTLFFAQFSVARQATAWLGRGDTDHDLAETEPHTGSIRHAVK CCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH RAFDITLGLTMILALLPLLALVALVVKLDGGPSIYGHTRVGRNGEKFRCLKFRSMVVNSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCHH QVLDELLASDPVARAEWEREFKLKNDVRVTRIGHFLRRTSLDELPQLWNVVRGEMSLVGP HHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCC RPITAQELERYGAHSKYYLMATPGITGLWQVSGRCETDYATRVMLDVKYVTNWSLRADIG CCCCHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCHHEEEEEEEEEHCCCCHHHHHH ILFKTFFVVIKGNGAY HHHHHHEEEEECCCCC >Mature Secondary Structure MRTAAAKHRPLNATQWGRNMSELVHRAIDIALIVLGAFGALHLNLSFNVAAVGPAHQLDP CCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEECCCCCCCCH TLVAFVAALALSVFPACGTYPPRGRHPVASVAGRTAFAWLAVQLCGLALLYAIHRDNVIS HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEC MPWFIYWTLTTGISLLASHTLFFAQFSVARQATAWLGRGDTDHDLAETEPHTGSIRHAVK CCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH RAFDITLGLTMILALLPLLALVALVVKLDGGPSIYGHTRVGRNGEKFRCLKFRSMVVNSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCHH QVLDELLASDPVARAEWEREFKLKNDVRVTRIGHFLRRTSLDELPQLWNVVRGEMSLVGP HHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCC RPITAQELERYGAHSKYYLMATPGITGLWQVSGRCETDYATRVMLDVKYVTNWSLRADIG CCCCHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCHHEEEEEEEEEHCCCCHHHHHH ILFKTFFVVIKGNGAY HHHHHHEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7596293 [H]