| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is cysW [H]
Identifier: 186476385
GI number: 186476385
Start: 1849774
End: 1850778
Strand: Reverse
Name: cysW [H]
Synonym: Bphy_1627
Alternate gene names: 186476385
Gene position: 1850778-1849774 (Counterclockwise)
Preceding gene: 186476386
Following gene: 186476384
Centisome position: 53.2
GC content: 63.98
Gene sequence:
>1005_bases GTGAGCCAGGATTCCGCTGTGCTGTCGCGTCCGGCGCCGAATAACGCGAATGCCGCGCGCCGTCCCGATCCCGTCACCGA GCCGCGTGCTGTCCGCTGGGTCCTGACGATCATCGCGTTGCTGTTCCTCGCGCTGTTTCTGGTGCTGCCGCTCGTCGCCG TGTTCTATCAGGCGTTGAGCAAGGGCATTGCGTTCTACTTCGAGTCGCTTGCCGATCCCGATGCGGTGTCCGCGATCAAG CTCACGCTGCTGACGGCCGCGATCGCCGTGCCGCTCAATCTCGTGTTCGGACTCGCGGCGTCGTGGTGTATCGCGAAGTT CGAGTTTCGCGGCAAGGCCTTGCTGACGACGCTGATCGACTTGCCGTTTTCGGTGTCGCCCGTGATCTCCGGCCTGATCT ACGTGCTGATGTTCGGCGCGCAGGGCTGGTTCGGGCCGTGGCTTGCCGATCACAACGTGCAGATCATCTTCGCGGTGCCG GGTATCGTGCTCGCGACCATCTTCGTCACGTTCCCGTTCGTTGCCCGAGAACTGATTCCGCTGATGCAGGCGCAAGGCAA TGACGAGGAAGAAGCCGCGCACGTGCTCGGCGCATCGGGCTGGCAGATCTTCCGGCGCGTCACGCTGCCGAACGTCAAGT GGGGTCTGCTGTATGGCGTGATTCTCTGCAACGCGCGTGCGATGGGCGAGTTCGGCGCGGTGTCGGTGGTGTCGGGCCAC ATTCGCGGGCAGACGGACACGATGCCCCTGCACGTCGAGATTCTCTACAACGAATATAACTTTTCGGCGGCCTTCGCCGT GGCGTCGGTGCTCGCGTTGCTGGCACTCGTCACGCTCGGCCTGAAGCTGCTGGCCGAGCGCCACATGTCGGCGGAACTGG CGAGTGCGAACGATGTGCCTGCGCATGCCGGTCCCGGTTCACATTCCGCTGCACATTCCGCTGCACAGCCGGCCGCACAT TCGCCTGAGGGTGCGACCCAGCACGCGGCACAACCGGTTCAGTAA
Upstream 100 bases:
>100_bases TCAACACGCTGCAGTGGTATCTGCAGCGGCGCACGAGCCGCGGGCGCACCGCGCCCACTGTTGCGCCTTCGACAGCCGTC GCCGCAACGGGAGGTGTGCA
Downstream 100 bases:
>100_bases GGAGAGTTGTCAAAGATGGGCATTACCGTACGCAATCTGCAAAAACGCTTTGGCGACTTCACCGCCCTCGACAACGTCTC GCTCGATTTTCCACCGGGCG
Product: sulfate ABC transporter inner membrane subunit CysW
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MSQDSAVLSRPAPNNANAARRPDPVTEPRAVRWVLTIIALLFLALFLVLPLVAVFYQALSKGIAFYFESLADPDAVSAIK LTLLTAAIAVPLNLVFGLAASWCIAKFEFRGKALLTTLIDLPFSVSPVISGLIYVLMFGAQGWFGPWLADHNVQIIFAVP GIVLATIFVTFPFVARELIPLMQAQGNDEEEAAHVLGASGWQIFRRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGH IRGQTDTMPLHVEILYNEYNFSAAFAVASVLALLALVTLGLKLLAERHMSAELASANDVPAHAGPGSHSAAHSAAQPAAH SPEGATQHAAQPVQ
Sequences:
>Translated_334_residues MSQDSAVLSRPAPNNANAARRPDPVTEPRAVRWVLTIIALLFLALFLVLPLVAVFYQALSKGIAFYFESLADPDAVSAIK LTLLTAAIAVPLNLVFGLAASWCIAKFEFRGKALLTTLIDLPFSVSPVISGLIYVLMFGAQGWFGPWLADHNVQIIFAVP GIVLATIFVTFPFVARELIPLMQAQGNDEEEAAHVLGASGWQIFRRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGH IRGQTDTMPLHVEILYNEYNFSAAFAVASVLALLALVTLGLKLLAERHMSAELASANDVPAHAGPGSHSAAHSAAQPAAH SPEGATQHAAQPVQ >Mature_333_residues SQDSAVLSRPAPNNANAARRPDPVTEPRAVRWVLTIIALLFLALFLVLPLVAVFYQALSKGIAFYFESLADPDAVSAIKL TLLTAAIAVPLNLVFGLAASWCIAKFEFRGKALLTTLIDLPFSVSPVISGLIYVLMFGAQGWFGPWLADHNVQIIFAVPG IVLATIFVTFPFVARELIPLMQAQGNDEEEAAHVLGASGWQIFRRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGHI RGQTDTMPLHVEILYNEYNFSAAFAVASVLALLALVTLGLKLLAERHMSAELASANDVPAHAGPGSHSAAHSAAQPAAHS PEGATQHAAQPVQ
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=271, Percent_Identity=52.3985239852399, Blast_Score=299, Evalue=1e-82, Organism=Escherichia coli, GI1788764, Length=206, Percent_Identity=38.3495145631068, Blast_Score=159, Evalue=2e-40, Organism=Escherichia coli, GI1786980, Length=181, Percent_Identity=34.2541436464088, Blast_Score=90, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 35621; Mature: 35490
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQDSAVLSRPAPNNANAARRPDPVTEPRAVRWVLTIIALLFLALFLVLPLVAVFYQALS CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGIAFYFESLADPDAVSAIKLTLLTAAIAVPLNLVFGLAASWCIAKFEFRGKALLTTLID HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LPFSVSPVISGLIYVLMFGAQGWFGPWLADHNVQIIFAVPGIVLATIFVTFPFVARELIP CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHH LMQAQGNDEEEAAHVLGASGWQIFRRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGH HHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHCCCCCCHHHHCCC IRGQTDTMPLHVEILYNEYNFSAAFAVASVLALLALVTLGLKLLAERHMSAELASANDVP CCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AHAGPGSHSAAHSAAQPAAHSPEGATQHAAQPVQ CCCCCCCCHHHHHHCCCCCCCCCCCHHHCCCCCC >Mature Secondary Structure SQDSAVLSRPAPNNANAARRPDPVTEPRAVRWVLTIIALLFLALFLVLPLVAVFYQALS CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KGIAFYFESLADPDAVSAIKLTLLTAAIAVPLNLVFGLAASWCIAKFEFRGKALLTTLID HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LPFSVSPVISGLIYVLMFGAQGWFGPWLADHNVQIIFAVPGIVLATIFVTFPFVARELIP CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHH LMQAQGNDEEEAAHVLGASGWQIFRRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGH HHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCHHCCCCCCHHHHCCC IRGQTDTMPLHVEILYNEYNFSAAFAVASVLALLALVTLGLKLLAERHMSAELASANDVP CCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AHAGPGSHSAAHSAAQPAAHSPEGATQHAAQPVQ CCCCCCCCHHHHHHCCCCCCCCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]